RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 DCTPP1Q9H773 170 aa30.72■■■□□ 2.51
PDF-201ENST00000288022 ANGEL1Q9UNK9 670 aaKnown RBP30.72■■■□□ 2.51
PDF-201ENST00000288022 MROH7-TTC4A0A0A0MT08 1334 aa30.72■■■□□ 2.51
PDF-201ENST00000288022 GAKO14976 1311 aa30.72■■■□□ 2.51
PDF-201ENST00000288022 SSC5DA1L4H1 1573 aa30.71■■■□□ 2.51
PDF-201ENST00000288022 PPP1R12BO60237 982 aaPredicted RBP30.71■■■□□ 2.51
PDF-201ENST00000288022 FKBP1CQ5VVH2 108 aa30.71■■■□□ 2.51
PDF-201ENST00000288022 CCDC102AQ96A19 550 aa30.71■■■□□ 2.51
PDF-201ENST00000288022 NSUN4Q96CB9 384 aaKnown RBP30.71■■■□□ 2.51
PDF-201ENST00000288022 FZD1Q9UP38 647 aa30.71■■■□□ 2.51
PDF-201ENST00000288022 SMARCA5O60264 1052 aaPredicted RBP30.7■■■□□ 2.51
PDF-201ENST00000288022 LDHCP07864 332 aa30.7■■■□□ 2.51
PDF-201ENST00000288022 FAM83AQ86UY5 434 aa30.7■■■□□ 2.51
PDF-201ENST00000288022 HSPA1AP0DMV8 641 aaKnown RBP30.69■■■□□ 2.5
PDF-201ENST00000288022 HSPA1BP0DMV9 641 aaKnown RBP30.69■■■□□ 2.5
PDF-201ENST00000288022 BTDP43251 543 aa30.69■■■□□ 2.5
PDF-201ENST00000288022 FAM163AQ96GL9 167 aaPredicted RBP30.69■■■□□ 2.5
PDF-201ENST00000288022 TEPSINQ96N21 525 aa30.69■■■□□ 2.5
PDF-201ENST00000288022 NDUFB9Q9Y6M9 179 aa30.69■■■□□ 2.5
PDF-201ENST00000288022 THSD7BQ9C0I4 1608 aa30.69■■■□□ 2.5
PDF-201ENST00000288022 MAP2K2P36507 400 aa30.68■■■□□ 2.5
PDF-201ENST00000288022 CDAN1Q8IWY9 1227 aa30.68■■■□□ 2.5
PDF-201ENST00000288022 ZNF384Q8TF68 577 aa30.68■■■□□ 2.5
PDF-201ENST00000288022 PIH1D3Q9NQM4 214 aaKnown RBP30.68■■■□□ 2.5
PDF-201ENST00000288022 MAST2Q6P0Q8 1798 aa30.68■■■□□ 2.5
PDF-201ENST00000288022 TCP10Q12799 353 aa30.67■■■□□ 2.5
PDF-201ENST00000288022 NOGQ13253 232 aa30.67■■■□□ 2.5
PDF-201ENST00000288022 NAA16Q6N069 864 aaPredicted RBP30.67■■■□□ 2.5
PDF-201ENST00000288022 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.67■■■□□ 2.5
PDF-201ENST00000288022 MAP2K1Q02750 393 aaPredicted RBP30.66■■■□□ 2.5
PDF-201ENST00000288022 GPR75-ASB3A0A0A6YYF3 556 aa30.65■■■□□ 2.5
PDF-201ENST00000288022 FAM155AB1AL88 458 aaPredicted RBP30.65■■■□□ 2.5
PDF-201ENST00000288022 SLC10A3P09131 477 aa30.65■■■□□ 2.5
PDF-201ENST00000288022 NFIAQ12857 509 aa30.65■■■□□ 2.5
PDF-201ENST00000288022 RASAL3Q86YV0 1011 aa30.65■■■□□ 2.5
PDF-201ENST00000288022 FAM151AQ8WW52 585 aa30.65■■■□□ 2.5
PDF-201ENST00000288022 AIDAQ96BJ3 306 aa30.65■■■□□ 2.5
PDF-201ENST00000288022 NOL10Q9BSC4 688 aaKnown RBP30.65■■■□□ 2.5
PDF-201ENST00000288022 IDH1O75874 414 aaKnown RBP30.64■■■□□ 2.5
PDF-201ENST00000288022 IREB2P48200 963 aaKnown RBP30.64■■■□□ 2.5
PDF-201ENST00000288022 AAMPQ13685 434 aa30.64■■■□□ 2.5
PDF-201ENST00000288022 MAP3K11Q16584 847 aa30.63■■■□□ 2.49
PDF-201ENST00000288022 LDLRAD1Q5T700 205 aa30.63■■■□□ 2.49
PDF-201ENST00000288022 DNAJC2Q99543 621 aaKnown RBP30.63■■■□□ 2.49
PDF-201ENST00000288022 ANTXR1Q9H6X2 564 aa30.63■■■□□ 2.49
PDF-201ENST00000288022 MYO5AQ9Y4I1 1855 aaKnown RBP30.63■■■□□ 2.49
PDF-201ENST00000288022 USP2O75604 605 aaPredicted RBP30.62■■■□□ 2.49
PDF-201ENST00000288022 EXOC6Q8TAG9 804 aa30.62■■■□□ 2.49
PDF-201ENST00000288022 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.62■■■□□ 2.49
PDF-201ENST00000288022 HOOK2Q96ED9 719 aa30.62■■■□□ 2.49
PDF-201ENST00000288022 BEGAINQ9BUH8 593 aa30.62■■■□□ 2.49
PDF-201ENST00000288022 WBP1LQ9NX94 342 aa30.62■■■□□ 2.49
PDF-201ENST00000288022 FAM198AQ9UFP1 575 aa30.62■■■□□ 2.49
PDF-201ENST00000288022 RPAP1Q9BWH6 1393 aaPredicted RBP30.62■■■□□ 2.49
PDF-201ENST00000288022 RGS3P49796 1198 aa30.61■■■□□ 2.49
PDF-201ENST00000288022 ZIC5Q96T25 663 aa30.61■■■□□ 2.49
PDF-201ENST00000288022 IDI2Q9BXS1 227 aa30.61■■■□□ 2.49
PDF-201ENST00000288022 IGSF3O75054 1194 aa30.6■■■□□ 2.49
PDF-201ENST00000288022 PICALMQ13492 652 aa30.6■■■□□ 2.49
PDF-201ENST00000288022 TTF1Q15361 905 aaPredicted RBP30.6■■■□□ 2.49
PDF-201ENST00000288022 BAG3O95817 575 aa30.59■■■□□ 2.49
PDF-201ENST00000288022 KIF23Q02241 960 aaPredicted RBP30.59■■■□□ 2.49
PDF-201ENST00000288022 MAP3K12Q12852 859 aa30.59■■■□□ 2.49
PDF-201ENST00000288022 SLC10A4Q96EP9 437 aa30.59■■■□□ 2.49
PDF-201ENST00000288022 BOLA2Q9H3K6 86 aa30.59■■■□□ 2.49
PDF-201ENST00000288022 AK9Q5TCS8 1911 aa30.58■■■□□ 2.49
PDF-201ENST00000288022 GOLIM4O00461 696 aa30.58■■■□□ 2.49
PDF-201ENST00000288022 ENTPD3O75355 529 aa30.58■■■□□ 2.49
PDF-201ENST00000288022 WDHD1O75717 1129 aaPredicted RBP30.58■■■□□ 2.49
PDF-201ENST00000288022 ATP5JP18859 108 aa30.58■■■□□ 2.49
PDF-201ENST00000288022 CYP7A1P22680 504 aa30.58■■■□□ 2.49
PDF-201ENST00000288022 RHBDL3P58872 404 aa30.58■■■□□ 2.49
PDF-201ENST00000288022 DCAF15Q66K64 600 aa30.58■■■□□ 2.49
PDF-201ENST00000288022 ZSCAN29Q8IWY8 852 aaPredicted RBP30.58■■■□□ 2.49
PDF-201ENST00000288022 ZFPM1Q8IX07 1006 aa30.58■■■□□ 2.49
PDF-201ENST00000288022 ANKRD13AQ8IZ07 590 aa30.58■■■□□ 2.49
PDF-201ENST00000288022 MAGEB6Q8N7X4 407 aa30.58■■■□□ 2.49
PDF-201ENST00000288022 CLMNQ96JQ2 1002 aa30.58■■■□□ 2.49
PDF-201ENST00000288022 AATFQ9NY61 560 aaKnown RBP eCLIP30.58■■■□□ 2.49
PDF-201ENST00000288022 RFX7Q2KHR2 1363 aa30.57■■■□□ 2.48
PDF-201ENST00000288022 DOCK2Q92608 1830 aa30.57■■■□□ 2.48
PDF-201ENST00000288022 MAP4K4O95819 1239 aaPredicted RBP30.57■■■□□ 2.48
PDF-201ENST00000288022 MKRN3Q13064 507 aaKnown RBP30.57■■■□□ 2.48
PDF-201ENST00000288022 ADGRA1Q86SQ6 560 aa30.57■■■□□ 2.48
PDF-201ENST00000288022 GPATCH3Q96I76 525 aa30.57■■■□□ 2.48
PDF-201ENST00000288022 ZBTB47Q9UFB7 747 aaPredicted RBP30.57■■■□□ 2.48
PDF-201ENST00000288022 UNCXA6NJT0 531 aa30.56■■■□□ 2.48
PDF-201ENST00000288022 FOXN1O15353 648 aa30.56■■■□□ 2.48
PDF-201ENST00000288022 HDAC1Q13547 482 aaPredicted RBP30.56■■■□□ 2.48
PDF-201ENST00000288022 MIGA2Q7L4E1 593 aa30.56■■■□□ 2.48
PDF-201ENST00000288022 TEX11Q8IYF3 940 aa30.56■■■□□ 2.48
PDF-201ENST00000288022 DDX4Q9NQI0 724 aaKnown RBP30.56■■■□□ 2.48
PDF-201ENST00000288022 PLCG2P16885 1265 aa30.55■■■□□ 2.48
PDF-201ENST00000288022 SH3RF3Q8TEJ3 882 aaPredicted RBP30.55■■■□□ 2.48
PDF-201ENST00000288022 ECHDC1Q9NTX5 307 aa30.55■■■□□ 2.48
PDF-201ENST00000288022 PAG1Q9NWQ8 432 aa30.55■■■□□ 2.48
PDF-201ENST00000288022 OTOFQ9HC10 1997 aa30.55■■■□□ 2.48
PDF-201ENST00000288022 IRX6P78412 446 aaPredicted RBP30.54■■■□□ 2.48
PDF-201ENST00000288022 EDC3Q96F86 508 aaKnown RBP30.54■■■□□ 2.48
PDF-201ENST00000288022 MAP3K9P80192 1104 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms