RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 MTRF1LQ9UGC7 380 aaKnown RBP13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 HDAC9Q9UKV0 1011 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 TNNQ9UQP3 1299 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 CD109Q6YHK3 1445 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 SETDB1Q15047 1291 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 SLC27A2O14975 620 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 CD2BP2O95400 341 aaKnown RBP13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 ERCC5P28715 1186 aaPredicted RBP13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 SCLT1Q96NL6 688 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 VWA3BQ502W6 1294 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 NBPF14Q5TI25 921 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 GKAP1Q5VSY0 366 aaPredicted RBP13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 SRGAP1Q7Z6B7 1085 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 PYCARDQ9ULZ3 195 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 NFE2L3Q9Y4A8 694 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 SBNO1A3KN83 1393 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 IFIT3O14879 490 aaKnown RBP13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 DDIT3P35638 169 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 UBXN1Q04323 297 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 C16orf71Q8IYS4 520 aaPredicted RBP13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 PLCB1Q9NQ66 1216 aa13.15□□□□□ -0.3
DNMT3A-201ENST00000264709 IFIT5Q13325 482 aaKnown RBP13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 CFAP221Q4G0U5 840 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 DRC1Q96MC2 740 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 VEZTQ9HBM0 779 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 RAD21O60216 631 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 FNBP4Q8N3X1 1017 aaPredicted RBP13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 BANK1Q8NDB2 785 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 CPLX3Q8WVH0 158 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 PAIP2Q9BPZ3 127 aaKnown RBP13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 PAG1Q9NWQ8 432 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 DCAF8L1A6NGE4 600 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 NR1I2O75469 434 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 MAP3K2Q9Y2U5 619 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 CMA1P23946 247 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 ZNF274Q96GC6 653 aaPredicted RBP13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 TXNDC2Q86VQ3 553 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 PHACTR3Q96KR7 559 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 CLTCL1P53675 1640 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 FAM83GA6ND36 823 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 STAT6P42226 847 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 LONRF2Q1L5Z9 754 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 CCDC26Q8TAB7 109 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 CAPS2Q9BXY5 557 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 CEP83Q9Y592 693 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 LRCH2Q5VUJ6 765 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 MCTP2Q6DN12 878 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 NOX5Q96PH1 765 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 TRIM7Q9C029 511 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 LRMPQ12912 555 aa13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 OTUD7AQ8TE49 926 aaPredicted RBP13.14□□□□□ -0.31
DNMT3A-201ENST00000264709 POGZQ7Z3K3 1410 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 CAMSAP1Q5T5Y3 1602 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 RASSF2P50749 326 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 VCXQ9H320 206 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 VGLL3A8MV65 326 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 TSPYL6Q8N831 410 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 NEK11Q8NG66 645 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 WDR66Q8TBY9 1149 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 SPATS2LQ9NUQ6 558 aaKnown RBP13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 CWC25Q9NXE8 425 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 ACTN4O43707 911 aaKnown RBP13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 CACTINQ8WUQ7 758 aaKnown RBP13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 TMEM87BQ96K49 555 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 MYH8P13535 1937 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 GSTTP1A0A1W2PQM5 241 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 NUTM2BA6NNL0 878 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 NUTM2EB1AL46 878 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 RAD51AP2Q09MP3 1159 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 RRAGBQ5VZM2 374 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 TSC1Q92574 1164 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 NCAPGQ9BPX3 1015 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 RNF14Q9UBS8 474 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 ANGEL1Q9UNK9 670 aaKnown RBP13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 RTN1Q16799 776 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 PLCD3Q8N3E9 789 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 ZRANB1Q9UGI0 708 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 RFX7Q2KHR2 1363 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 GNAQP50148 359 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 PSD3Q9NYI0 1048 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 IDH1O75874 414 aaKnown RBP13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 RTEL1Q9NZ71 1219 aa13.13□□□□□ -0.31
DNMT3A-201ENST00000264709 A0A1B0GVL5 298 aa13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 TADA2BQ86TJ2 420 aa13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 TAOK1Q7L7X3 1001 aa13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 TTC6Q86TZ1 520 aa13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 ESR2Q92731 530 aa13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 ZC3H13Q5T200 1668 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 ATF3P18847 181 aa13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 PFKFB2O60825 505 aa13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 STXBP4Q6ZWJ1 553 aa13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 ZFP91Q96JP5 570 aaPredicted RBP13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 PLEKHF1Q96S99 279 aa13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 PDE11AQ9HCR9 933 aa13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 PLA2G4DQ86XP0 818 aa13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 GEMIN8Q9NWZ8 242 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 MIS18AQ9NYP9 233 aa13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 ADAM21Q9UKJ8 722 aa13.12□□□□□ -0.31
DNMT3A-201ENST00000264709 UGGT1Q9NYU2 1555 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms