RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 PA2G4Q9UQ80 394 aaKnown RBP15.18■□□□□ 0.02
TRAF4-202ENST00000262396 AKAP2Q9Y2D5 859 aa15.18■□□□□ 0.02
TRAF4-202ENST00000262396 TESPA1A2RU30 521 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-202ENST00000262396 SPDYE5A6NIY4 337 aa15.17■□□□□ 0.02
TRAF4-202ENST00000262396 SEMA3EO15041 775 aa15.17■□□□□ 0.02
TRAF4-202ENST00000262396 SRGAP3O43295 1099 aa15.17■□□□□ 0.02
TRAF4-202ENST00000262396 DIXDC1Q155Q3 683 aa15.17■□□□□ 0.02
TRAF4-202ENST00000262396 ATG9AQ7Z3C6 839 aa15.17■□□□□ 0.02
TRAF4-202ENST00000262396 FAM151AQ8WW52 585 aa15.17■□□□□ 0.02
TRAF4-202ENST00000262396 BRI3BPQ8WY22 251 aa15.17■□□□□ 0.02
TRAF4-202ENST00000262396 NEUROD6Q96NK8 337 aa15.17■□□□□ 0.02
TRAF4-202ENST00000262396 PTPN18Q99952 460 aa15.17■□□□□ 0.02
TRAF4-202ENST00000262396 PRDX5P30044 214 aa15.16■□□□□ 0.02
TRAF4-202ENST00000262396 RARSP54136 660 aaKnown RBP15.16■□□□□ 0.02
TRAF4-202ENST00000262396 SPTY2D1Q68D10 685 aaPredicted RBP15.16■□□□□ 0.02
TRAF4-202ENST00000262396 NBPF11Q86T75 865 aa15.16■□□□□ 0.02
TRAF4-202ENST00000262396 MEIS3Q99687 375 aa15.16■□□□□ 0.02
TRAF4-202ENST00000262396 TMEM106CQ9BVX2 250 aa15.16■□□□□ 0.02
TRAF4-202ENST00000262396 DAGLAQ9Y4D2 1042 aa15.16■□□□□ 0.02
TRAF4-202ENST00000262396 ECM2O94769 699 aaPredicted RBP15.15■□□□□ 0.02
TRAF4-202ENST00000262396 PHKA1P46020 1223 aa15.15■□□□□ 0.02
TRAF4-202ENST00000262396 PPIL2Q13356 520 aa15.15■□□□□ 0.02
TRAF4-202ENST00000262396 MVPQ14764 893 aaKnown RBP15.15■□□□□ 0.02
TRAF4-202ENST00000262396 CDC42EP5Q6NZY7 148 aa15.15■□□□□ 0.02
TRAF4-202ENST00000262396 TRMT2AQ8IZ69 625 aaKnown RBP15.15■□□□□ 0.02
TRAF4-202ENST00000262396 MS4A4AQ96JQ5 239 aa15.15■□□□□ 0.02
TRAF4-202ENST00000262396 PTPN22Q9Y2R2 807 aa15.15■□□□□ 0.02
TRAF4-202ENST00000262396 PPATQ06203 517 aa15.14■□□□□ 0.01
TRAF4-202ENST00000262396 G3BP1Q13283 466 aaKnown RBP eCLIP15.14■□□□□ 0.01
TRAF4-202ENST00000262396 OS9Q13438 667 aaPredicted RBP15.14■□□□□ 0.01
TRAF4-202ENST00000262396 SLC9C1Q4G0N8 1177 aa15.14■□□□□ 0.01
TRAF4-202ENST00000262396 CCDC102BQ68D86 513 aa15.14■□□□□ 0.01
TRAF4-202ENST00000262396 FAM43AQ8N2R8 423 aa15.14■□□□□ 0.01
TRAF4-202ENST00000262396 ARHGAP45Q92619 1136 aa15.14■□□□□ 0.01
TRAF4-202ENST00000262396 COPRSQ9NQ92 184 aa15.14■□□□□ 0.01
TRAF4-202ENST00000262396 PICK1Q9NRD5 415 aa15.14■□□□□ 0.01
TRAF4-202ENST00000262396 SNCAIPQ9Y6H5 919 aa15.14■□□□□ 0.01
TRAF4-202ENST00000262396 ARAP2Q8WZ64 1704 aa15.14■□□□□ 0.01
TRAF4-202ENST00000262396 IRF6O14896 467 aa15.13■□□□□ 0.01
TRAF4-202ENST00000262396 GNAI2P04899 355 aa15.13■□□□□ 0.01
TRAF4-202ENST00000262396 ADORA1P30542 326 aa15.13■□□□□ 0.01
TRAF4-202ENST00000262396 INPP5BP32019 993 aa15.13■□□□□ 0.01
TRAF4-202ENST00000262396 TIMM10P62072 90 aa15.13■□□□□ 0.01
TRAF4-202ENST00000262396 PICALMQ13492 652 aa15.13■□□□□ 0.01
TRAF4-202ENST00000262396 SLC4A8Q2Y0W8 1093 aa15.13■□□□□ 0.01
TRAF4-202ENST00000262396 PRPF38BQ5VTL8 546 aaKnown RBP15.13■□□□□ 0.01
TRAF4-202ENST00000262396 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.13■□□□□ 0.01
TRAF4-202ENST00000262396 CLUAP1Q96AJ1 413 aa15.13■□□□□ 0.01
TRAF4-202ENST00000262396 RPAP1Q9BWH6 1393 aaPredicted RBP15.12■□□□□ 0.01
TRAF4-202ENST00000262396 A0A1B0GUL7 405 aa15.12■□□□□ 0.01
TRAF4-202ENST00000262396 BTBD19C9JJ37 291 aa15.12■□□□□ 0.01
TRAF4-202ENST00000262396 MYCP01106 439 aaPredicted RBP15.12■□□□□ 0.01
TRAF4-202ENST00000262396 TFCP2Q12800 502 aa15.12■□□□□ 0.01
TRAF4-202ENST00000262396 ERICH6Q7L0X2 663 aa15.12■□□□□ 0.01
TRAF4-202ENST00000262396 XAGE2Q96GT9 111 aa15.12■□□□□ 0.01
TRAF4-202ENST00000262396 NOL10Q9BSC4 688 aaKnown RBP15.12■□□□□ 0.01
TRAF4-202ENST00000262396 SALL1Q9NSC2 1324 aa15.12■□□□□ 0.01
TRAF4-202ENST00000262396 TLR2O60603 784 aa15.11■□□□□ 0.01
TRAF4-202ENST00000262396 GSTO1P78417 241 aa15.11■□□□□ 0.01
TRAF4-202ENST00000262396 NFIAQ12857 509 aa15.11■□□□□ 0.01
TRAF4-202ENST00000262396 ZCCHC17Q9NP64 241 aaKnown RBP15.11■□□□□ 0.01
TRAF4-202ENST00000262396 FMNL1O95466 1100 aaPredicted RBP15.1■□□□□ 0.01
TRAF4-202ENST00000262396 LDHCP07864 332 aa15.1■□□□□ 0.01
TRAF4-202ENST00000262396 HOXD10P28358 340 aa15.1■□□□□ 0.01
TRAF4-202ENST00000262396 BTDP43251 543 aa15.1■□□□□ 0.01
TRAF4-202ENST00000262396 RGS3P49796 1198 aa15.1■□□□□ 0.01
TRAF4-202ENST00000262396 RASGRF1Q13972 1273 aa15.1■□□□□ 0.01
TRAF4-202ENST00000262396 ATF7IPQ6VMQ6 1270 aa15.1■□□□□ 0.01
TRAF4-202ENST00000262396 FTSJ3Q8IY81 847 aaKnown RBP15.1■□□□□ 0.01
TRAF4-202ENST00000262396 RAI14Q9P0K7 980 aa15.1■□□□□ 0.01
TRAF4-202ENST00000262396 PDHXO00330 501 aa15.09■□□□□ 0.01
TRAF4-202ENST00000262396 ENTPD3O75355 529 aa15.09■□□□□ 0.01
TRAF4-202ENST00000262396 ZKSCAN2Q63HK3 967 aa15.09■□□□□ 0.01
TRAF4-202ENST00000262396 GADL1Q6ZQY3 521 aa15.09■□□□□ 0.01
TRAF4-202ENST00000262396 ANKRD23Q86SG2 305 aa15.09■□□□□ 0.01
TRAF4-202ENST00000262396 FAM198AQ9UFP1 575 aa15.09■□□□□ 0.01
TRAF4-202ENST00000262396 CPA4Q9UI42 421 aa15.09■□□□□ 0.01
TRAF4-202ENST00000262396 PTCH2Q9Y6C5 1203 aa15.09■□□□□ 0.01
TRAF4-202ENST00000262396 AK9Q5TCS8 1911 aa15.08■□□□□ 0
TRAF4-202ENST00000262396 BCAR3O75815 825 aa15.08■□□□□ 0
TRAF4-202ENST00000262396 TRIM27P14373 513 aa15.08■□□□□ 0
TRAF4-202ENST00000262396 HNRNPUQ00839 825 aaKnown RBP eCLIP15.08■□□□□ 0
TRAF4-202ENST00000262396 FASTKD5Q7L8L6 764 aaKnown RBP15.08■□□□□ 0
TRAF4-202ENST00000262396 RAET1EQ8TD07 263 aa15.08■□□□□ 0
TRAF4-202ENST00000262396 PARK7Q99497 189 aaKnown RBP15.08■□□□□ 0
TRAF4-202ENST00000262396 LRP2BPQ9P2M1 347 aa15.08■□□□□ 0
TRAF4-202ENST00000262396 BIN2Q9UBW5 565 aaPredicted RBP15.08■□□□□ 0
TRAF4-202ENST00000262396 ZHX2Q9Y6X8 837 aa15.08■□□□□ 0
TRAF4-202ENST00000262396 OTOFQ9HC10 1997 aa15.07■□□□□ 0
TRAF4-202ENST00000262396 POTEFA5A3E0 1075 aa15.07■□□□□ 0
TRAF4-202ENST00000262396 CXCL11O14625 94 aa15.07■□□□□ 0
TRAF4-202ENST00000262396 GNRH1P01148 92 aa15.07■□□□□ 0
TRAF4-202ENST00000262396 UQCRFS1P1P0C7P4 283 aa15.07■□□□□ 0
TRAF4-202ENST00000262396 PRMT2P55345 433 aa15.07■□□□□ 0
TRAF4-202ENST00000262396 LACTBP83111 547 aaPredicted RBP15.07■□□□□ 0
TRAF4-202ENST00000262396 TTC39AQ5SRH9 613 aa15.07■□□□□ 0
TRAF4-202ENST00000262396 SPATA5Q8NB90 893 aa15.07■□□□□ 0
TRAF4-202ENST00000262396 ARMC5Q96C12 935 aa15.07■□□□□ 0
TRAF4-202ENST00000262396 GCC1Q96CN9 775 aa15.07■□□□□ 0
TRAF4-202ENST00000262396 IDI2Q9BXS1 227 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms