RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 JAG2Q9Y219 1238 aa18.39■□□□□ 0.53
LRFN1-201ENST00000248668 ZNF652Q9Y2D9 606 aa18.39■□□□□ 0.53
LRFN1-201ENST00000248668 COL4A1P02462 1669 aa18.38■□□□□ 0.53
LRFN1-201ENST00000248668 A0A1B0GVL5 298 aa18.38■□□□□ 0.53
LRFN1-201ENST00000248668 SH2B2O14492 632 aaPredicted RBP18.38■□□□□ 0.53
LRFN1-201ENST00000248668 CCDC73Q6ZRK6 1079 aa18.38■□□□□ 0.53
LRFN1-201ENST00000248668 GSG1L2A8MUP6 293 aa18.38■□□□□ 0.53
LRFN1-201ENST00000248668 PATL2C9JE40 543 aaKnown RBP18.38■□□□□ 0.53
LRFN1-201ENST00000248668 IFIT3O14879 490 aaKnown RBP18.38■□□□□ 0.53
LRFN1-201ENST00000248668 APOA5Q6Q788 366 aa18.38■□□□□ 0.53
LRFN1-201ENST00000248668 ADGRA1Q86SQ6 560 aa18.38■□□□□ 0.53
LRFN1-201ENST00000248668 CMTR1Q8N1G2 835 aaKnown RBP18.38■□□□□ 0.53
LRFN1-201ENST00000248668 FBXO18Q8NFZ0 1043 aa18.38■□□□□ 0.53
LRFN1-201ENST00000248668 ZSWIM5Q9P217 1185 aa18.38■□□□□ 0.53
LRFN1-201ENST00000248668 MINDY4BA8MYZ0 360 aa18.38■□□□□ 0.53
LRFN1-201ENST00000248668 CYP7A1P22680 504 aa18.38■□□□□ 0.53
LRFN1-201ENST00000248668 STK38Q15208 465 aa18.38■□□□□ 0.53
LRFN1-201ENST00000248668 TBC1D9BQ66K14 1250 aa18.38■□□□□ 0.53
LRFN1-201ENST00000248668 VPS37DQ86XT2 251 aa18.38■□□□□ 0.53
LRFN1-201ENST00000248668 CELF1Q92879 486 aaKnown RBP18.38■□□□□ 0.53
LRFN1-201ENST00000248668 ANKRD18AQ8IVF6 992 aa18.37■□□□□ 0.53
LRFN1-201ENST00000248668 AK7Q96M32 723 aa18.37■□□□□ 0.53
LRFN1-201ENST00000248668 PCDHA7Q9UN72 937 aa18.37■□□□□ 0.53
LRFN1-201ENST00000248668 PHLPP1O60346 1717 aa18.37■□□□□ 0.53
LRFN1-201ENST00000248668 SMARCC1Q92922 1105 aaPredicted RBP18.37■□□□□ 0.53
LRFN1-201ENST00000248668 ALG1Q9BT22 464 aa18.37■□□□□ 0.53
LRFN1-201ENST00000248668 OFD1O75665 1012 aa18.36■□□□□ 0.53
LRFN1-201ENST00000248668 ZNF165P49910 485 aa18.36■□□□□ 0.53
LRFN1-201ENST00000248668 CDC5LQ99459 802 aaKnown RBP18.36■□□□□ 0.53
LRFN1-201ENST00000248668 TAF1P21675 1872 aa18.36■□□□□ 0.53
LRFN1-201ENST00000248668 GOLGA8AA7E2F4 631 aa18.36■□□□□ 0.53
LRFN1-201ENST00000248668 ZBTB43O43298 467 aa18.36■□□□□ 0.53
LRFN1-201ENST00000248668 KLRK1P26718 216 aa18.36■□□□□ 0.53
LRFN1-201ENST00000248668 KINO60870 393 aaKnown RBP18.36■□□□□ 0.53
LRFN1-201ENST00000248668 MARCKSP29966 332 aaPredicted RBP18.36■□□□□ 0.53
LRFN1-201ENST00000248668 GNL2Q13823 731 aaKnown RBP18.36■□□□□ 0.53
LRFN1-201ENST00000248668 SLC51AQ86UW1 340 aa18.36■□□□□ 0.53
LRFN1-201ENST00000248668 BARGINQ6ZT62 677 aa18.35■□□□□ 0.53
LRFN1-201ENST00000248668 PAXIP1Q6ZW49 1069 aaPredicted RBP18.35■□□□□ 0.53
LRFN1-201ENST00000248668 FBXL16Q8N461 479 aa18.35■□□□□ 0.53
LRFN1-201ENST00000248668 COL22A1Q8NFW1 1626 aaPredicted RBP18.35■□□□□ 0.53
LRFN1-201ENST00000248668 ZNF500O60304 480 aaPredicted RBP18.35■□□□□ 0.53
LRFN1-201ENST00000248668 MFSD6Q6ZSS7 791 aa18.35■□□□□ 0.53
LRFN1-201ENST00000248668 IGDCC4Q8TDY8 1250 aa18.35■□□□□ 0.53
LRFN1-201ENST00000248668 LY9Q9HBG7 655 aa18.35■□□□□ 0.53
LRFN1-201ENST00000248668 NPHP1O15259 732 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 SYNE3Q6ZMZ3 975 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 C11orf57Q6ZUT1 292 aaPredicted RBP18.34■□□□□ 0.53
LRFN1-201ENST00000248668 ZMYM6O95789 1325 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 EP400Q96L91 3159 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 CYP2D7A0A087X1C5 515 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 GNPATO15228 680 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 SNW1Q13573 536 aaKnown RBP18.34■□□□□ 0.53
LRFN1-201ENST00000248668 MYSM1Q5VVJ2 828 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 DRC7Q8IY82 874 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 SLC26A6Q9BXS9 759 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 ATRNO75882 1429 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 UQCRHLA0A096LP55 91 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 UQCRHP07919 91 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 DNTTIP2Q5QJE6 756 aaKnown RBP18.34■□□□□ 0.53
LRFN1-201ENST00000248668 AMIGO3Q86WK7 504 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 NUP133Q8WUM0 1156 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 TFCP2L1Q9NZI6 479 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 SLC12A7Q9Y666 1083 aa18.34■□□□□ 0.53
LRFN1-201ENST00000248668 CCDC69A6NI79 296 aa18.33■□□□□ 0.53
LRFN1-201ENST00000248668 KIF23Q02241 960 aaPredicted RBP18.33■□□□□ 0.53
LRFN1-201ENST00000248668 SLC4A8Q2Y0W8 1093 aa18.33■□□□□ 0.53
LRFN1-201ENST00000248668 AKNAD1Q5T1N1 836 aa18.33■□□□□ 0.53
LRFN1-201ENST00000248668 TRIM5Q9C035 493 aa18.33■□□□□ 0.53
LRFN1-201ENST00000248668 UBAP1LF5GYI3 381 aa18.33■□□□□ 0.52
LRFN1-201ENST00000248668 RANBP6O60518 1105 aaKnown RBP18.33■□□□□ 0.52
LRFN1-201ENST00000248668 TOM1O60784 492 aa18.33■□□□□ 0.52
LRFN1-201ENST00000248668 DYNLL1P63167 89 aaKnown RBP18.33■□□□□ 0.52
LRFN1-201ENST00000248668 KIAA2012Q0VF49 1180 aa18.33■□□□□ 0.52
LRFN1-201ENST00000248668 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.33■□□□□ 0.52
LRFN1-201ENST00000248668 LINC00301Q8NCQ3 95 aa18.33■□□□□ 0.52
LRFN1-201ENST00000248668 SDF4Q9BRK5 362 aa18.33■□□□□ 0.52
LRFN1-201ENST00000248668 NDUFA8P51970 172 aa18.33■□□□□ 0.52
LRFN1-201ENST00000248668 KRT40Q6A162 431 aa18.33■□□□□ 0.52
LRFN1-201ENST00000248668 CHMP4CQ96CF2 233 aa18.33■□□□□ 0.52
LRFN1-201ENST00000248668 NACAP1Q9BZK3 213 aa18.33■□□□□ 0.52
LRFN1-201ENST00000248668 WNK3Q9BYP7 1800 aa18.32■□□□□ 0.52
LRFN1-201ENST00000248668 PRDM1O75626 825 aa18.32■□□□□ 0.52
LRFN1-201ENST00000248668 CHAF1AQ13111 956 aaPredicted RBP18.32■□□□□ 0.52
LRFN1-201ENST00000248668 PLCD3Q8N3E9 789 aa18.32■□□□□ 0.52
LRFN1-201ENST00000248668 BCL2L12Q9HB09 334 aa18.32■□□□□ 0.52
LRFN1-201ENST00000248668 MINPP1Q9UNW1 487 aa18.32■□□□□ 0.52
LRFN1-201ENST00000248668 IARSP41252 1262 aaKnown RBP18.32■□□□□ 0.52
LRFN1-201ENST00000248668 FAM160A1Q05DH4 1040 aa18.32■□□□□ 0.52
LRFN1-201ENST00000248668 RBM43Q6ZSC3 357 aaKnown RBP18.32■□□□□ 0.52
LRFN1-201ENST00000248668 NBPF5PQ86XG9 351 aaPredicted RBP18.32■□□□□ 0.52
LRFN1-201ENST00000248668 SPTLC2O15270 562 aa18.31■□□□□ 0.52
LRFN1-201ENST00000248668 MRPS27Q92552 414 aaKnown RBP18.31■□□□□ 0.52
LRFN1-201ENST00000248668 RTEL1Q9NZ71 1219 aa18.31■□□□□ 0.52
LRFN1-201ENST00000248668 GUCY1A2P33402 732 aa18.31■□□□□ 0.52
LRFN1-201ENST00000248668 CPLX2Q6PUV4 134 aaKnown RBP18.31■□□□□ 0.52
LRFN1-201ENST00000248668 FAM217BQ9NTX9 383 aaPredicted RBP18.31■□□□□ 0.52
LRFN1-201ENST00000248668 NRAPQ86VF7 1730 aa18.31■□□□□ 0.52
LRFN1-201ENST00000248668 BIN1O00499 593 aa18.31■□□□□ 0.52
LRFN1-201ENST00000248668 EVX2Q03828 476 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms