RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 SPATA31B1PQ5VZV4 182 aa13.21□□□□□ -0.29
CLN6-220ENST00000637450 LINC00336Q6ZUF6 198 aa13.21□□□□□ -0.29
CLN6-220ENST00000637450 POM121L12Q8N7R1 296 aa13.21□□□□□ -0.29
CLN6-220ENST00000637450 LRTM2Q8N967 370 aa13.21□□□□□ -0.29
CLN6-220ENST00000637450 ZNF709Q8N972 641 aa13.21□□□□□ -0.29
CLN6-220ENST00000637450 PKHD1P08F94 4074 aa13.2□□□□□ -0.3
CLN6-220ENST00000637450 IGKV1OR2-108A0A075B7D4 117 aa13.2□□□□□ -0.3
CLN6-220ENST00000637450 H3BMQ9 156 aa13.2□□□□□ -0.3
CLN6-220ENST00000637450 IAPPP10997 89 aa13.2□□□□□ -0.3
CLN6-220ENST00000637450 SLC25A6P12236 298 aa13.2□□□□□ -0.3
CLN6-220ENST00000637450 FAUP35544 74 aaKnown RBP13.2□□□□□ -0.3
CLN6-220ENST00000637450 ZNF79Q15937 498 aa13.2□□□□□ -0.3
CLN6-220ENST00000637450 GSG1LQ6UXU4 331 aa13.2□□□□□ -0.3
CLN6-220ENST00000637450 TMED4Q7Z7H5 227 aa13.2□□□□□ -0.3
CLN6-220ENST00000637450 OR8I2Q8N0Y5 310 aa13.2□□□□□ -0.3
CLN6-220ENST00000637450 THAP8Q8NA92 274 aa13.2□□□□□ -0.3
CLN6-220ENST00000637450 OR4B1Q8NGF8 309 aa13.2□□□□□ -0.3
CLN6-220ENST00000637450 MCFD2Q8NI22 146 aa13.2□□□□□ -0.3
CLN6-220ENST00000637450 COQ8AQ8NI60 647 aa13.2□□□□□ -0.3
CLN6-220ENST00000637450 RFNGQ9Y644 331 aa13.2□□□□□ -0.3
CLN6-220ENST00000637450 IGHV3OR16-12A0A075B7B8 117 aa13.19□□□□□ -0.3
CLN6-220ENST00000637450 ISLRO14498 428 aa13.19□□□□□ -0.3
CLN6-220ENST00000637450 EMP1P54849 157 aa13.19□□□□□ -0.3
CLN6-220ENST00000637450 PAX9P55771 341 aa13.19□□□□□ -0.3
CLN6-220ENST00000637450 PSG9Q00887 426 aa13.19□□□□□ -0.3
CLN6-220ENST00000637450 TRIM63Q969Q1 353 aa13.19□□□□□ -0.3
CLN6-220ENST00000637450 PPP1R14BQ96C90 147 aa13.19□□□□□ -0.3
CLN6-220ENST00000637450 MED6O75586 246 aa13.18□□□□□ -0.3
CLN6-220ENST00000637450 CFDP00746 253 aaPredicted RBP13.18□□□□□ -0.3
CLN6-220ENST00000637450 AP3S2P59780 193 aa13.18□□□□□ -0.3
CLN6-220ENST00000637450 FAM78BQ5VT40 261 aa13.18□□□□□ -0.3
CLN6-220ENST00000637450 EBLN2Q6P2I7 272 aa13.18□□□□□ -0.3
CLN6-220ENST00000637450 TOMM5Q8N4H5 51 aa13.18□□□□□ -0.3
CLN6-220ENST00000637450 SLC35B3Q9H1N7 401 aa13.18□□□□□ -0.3
CLN6-220ENST00000637450 DKK2Q9UBU2 259 aa13.18□□□□□ -0.3
CLN6-220ENST00000637450 PAIP2BQ9ULR5 123 aaKnown RBP13.18□□□□□ -0.3
CLN6-220ENST00000637450 A0A0J9YX75 114 aa13.17□□□□□ -0.3
CLN6-220ENST00000637450 PRSS46E5RG02 174 aa13.17□□□□□ -0.3
CLN6-220ENST00000637450 F6UB75 175 aa13.17□□□□□ -0.3
CLN6-220ENST00000637450 NOL3O60936 208 aaKnown RBP13.17□□□□□ -0.3
CLN6-220ENST00000637450 VAMP1P23763 118 aa13.17□□□□□ -0.3
CLN6-220ENST00000637450 RPP30P78346 268 aaKnown RBP13.17□□□□□ -0.3
CLN6-220ENST00000637450 PYDC2Q56P42 97 aa13.17□□□□□ -0.3
CLN6-220ENST00000637450 SAMD13Q5VXD3 122 aa13.17□□□□□ -0.3
CLN6-220ENST00000637450 GGNBP1Q5YKI7 109 aa13.17□□□□□ -0.3
CLN6-220ENST00000637450 C17orf77Q96MU5 243 aa13.17□□□□□ -0.3
CLN6-220ENST00000637450 CIB3Q96Q77 187 aaPredicted RBP13.17□□□□□ -0.3
CLN6-220ENST00000637450 SLC25A21Q9BQT8 299 aaPredicted RBP13.17□□□□□ -0.3
CLN6-220ENST00000637450 TMED3Q9Y3Q3 217 aa13.17□□□□□ -0.3
CLN6-220ENST00000637450 DYNC1H1Q14204 4646 aaKnown RBP13.16□□□□□ -0.3
CLN6-220ENST00000637450 TEX48A0A1B0GUV7 120 aa13.16□□□□□ -0.3
CLN6-220ENST00000637450 SYNGR2O43760 224 aa13.16□□□□□ -0.3
CLN6-220ENST00000637450 SFT2D2O95562 160 aa13.16□□□□□ -0.3
CLN6-220ENST00000637450 MEOX2P50222 304 aa13.16□□□□□ -0.3
CLN6-220ENST00000637450 FAM222AQ5U5X8 452 aa13.16□□□□□ -0.3
CLN6-220ENST00000637450 C1orf158Q8N1D5 194 aa13.16□□□□□ -0.3
CLN6-220ENST00000637450 FAM210BQ96KR6 192 aa13.16□□□□□ -0.3
CLN6-220ENST00000637450 C16orf92Q96LL3 132 aa13.16□□□□□ -0.3
CLN6-220ENST00000637450 C20orf173Q96LM9 149 aa13.16□□□□□ -0.3
CLN6-220ENST00000637450 MAGT1Q9H0U3 335 aa13.16□□□□□ -0.3
CLN6-220ENST00000637450 RPRMQ9NS64 109 aa13.16□□□□□ -0.3
CLN6-220ENST00000637450 SLC45A2Q9UMX9 530 aa13.16□□□□□ -0.3
CLN6-220ENST00000637450 GOLT1BQ9Y3E0 138 aa13.16□□□□□ -0.3
CLN6-220ENST00000637450 DNAH11Q96DT5 4516 aa13.15□□□□□ -0.3
CLN6-220ENST00000637450 A0A1B0GVY2 172 aa13.15□□□□□ -0.3
CLN6-220ENST00000637450 ZNF98A6NK75 572 aa13.15□□□□□ -0.3
CLN6-220ENST00000637450 GALR1P47211 349 aa13.15□□□□□ -0.3
CLN6-220ENST00000637450 NIPSNAP3BQ9BS92 247 aa13.15□□□□□ -0.3
CLN6-220ENST00000637450 RSG1Q9BU20 258 aa13.15□□□□□ -0.3
CLN6-220ENST00000637450 SLC25A32Q9H2D1 315 aa13.15□□□□□ -0.3
CLN6-220ENST00000637450 PLA2G2EQ9NZK7 142 aa13.15□□□□□ -0.3
CLN6-220ENST00000637450 V9GYH0 126 aa13.15□□□□□ -0.3
CLN6-220ENST00000637450 A8MTW9 85 aa13.14□□□□□ -0.31
CLN6-220ENST00000637450 WRBO00258 174 aa13.14□□□□□ -0.31
CLN6-220ENST00000637450 PPP1R1AQ13522 171 aa13.14□□□□□ -0.31
CLN6-220ENST00000637450 OXA1LQ15070 435 aa13.14□□□□□ -0.31
CLN6-220ENST00000637450 TMEM182Q6ZP80 229 aaPredicted RBP13.14□□□□□ -0.31
CLN6-220ENST00000637450 OR4D5Q8NGN0 318 aa13.14□□□□□ -0.31
CLN6-220ENST00000637450 DEDD2Q8WXF8 326 aa13.14□□□□□ -0.31
CLN6-220ENST00000637450 C7orf50Q9BRJ6 194 aaKnown RBP13.14□□□□□ -0.31
CLN6-220ENST00000637450 SLC25A22Q9H936 323 aa13.14□□□□□ -0.31
CLN6-220ENST00000637450 DOK5Q9P104 306 aa13.14□□□□□ -0.31
CLN6-220ENST00000637450 PKD1P98161 4303 aa13.13□□□□□ -0.31
CLN6-220ENST00000637450 M0R2N4 97 aa13.13□□□□□ -0.31
CLN6-220ENST00000637450 RTL8CO15255 209 aa13.13□□□□□ -0.31
CLN6-220ENST00000637450 HBE1P02100 147 aa13.13□□□□□ -0.31
CLN6-220ENST00000637450 HOXB5P09067 269 aa13.13□□□□□ -0.31
CLN6-220ENST00000637450 GATA2P23769 480 aaPredicted RBP13.13□□□□□ -0.31
CLN6-220ENST00000637450 LGALS9BQ3B8N2 356 aa13.13□□□□□ -0.31
CLN6-220ENST00000637450 BPIFCQ8NFQ6 507 aa13.13□□□□□ -0.31
CLN6-220ENST00000637450 RYR1P21817 5038 aa13.13□□□□□ -0.31
CLN6-220ENST00000637450 LOC102723971A0A1B0GUV8 181 aa13.12□□□□□ -0.31
CLN6-220ENST00000637450 IFNA21P01568 189 aa13.12□□□□□ -0.31
CLN6-220ENST00000637450 ORM2P19652 201 aa13.12□□□□□ -0.31
CLN6-220ENST00000637450 SPANXN5Q5MJ07 72 aa13.12□□□□□ -0.31
CLN6-220ENST00000637450 AMTNQ6UX39 209 aa13.12□□□□□ -0.31
CLN6-220ENST00000637450 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.12□□□□□ -0.31
CLN6-220ENST00000637450 OR1B1Q8NGR6 318 aa13.12□□□□□ -0.31
CLN6-220ENST00000637450 GPR82Q96P67 336 aa13.12□□□□□ -0.31
CLN6-220ENST00000637450 YTHDF2Q9Y5A9 579 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms