RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 IGFBPL1Q8WX77 278 aa9.26□□□□□ -0.93
CLN6-217ENST00000636964 FLYWCH2Q96CP2 140 aaKnown RBP9.26□□□□□ -0.93
CLN6-217ENST00000636964 TMEM14BQ9NUH8 114 aa9.26□□□□□ -0.93
CLN6-217ENST00000636964 USP9XQ93008 2570 aaPredicted RBP9.26□□□□□ -0.93
CLN6-217ENST00000636964 TLN2Q9Y4G6 2542 aa9.26□□□□□ -0.93
CLN6-217ENST00000636964 SMAD7O15105 426 aaKnown RBP9.26□□□□□ -0.93
CLN6-217ENST00000636964 OR5AU1Q8NGC0 362 aa9.26□□□□□ -0.93
CLN6-217ENST00000636964 FAM103A1Q9BTL3 118 aaKnown RBP9.26□□□□□ -0.93
CLN6-217ENST00000636964 TMEM147Q9BVK8 224 aa9.26□□□□□ -0.93
CLN6-217ENST00000636964 UPK2O00526 184 aa9.26□□□□□ -0.93
CLN6-217ENST00000636964 OR52E5Q8NH55 327 aa9.26□□□□□ -0.93
CLN6-217ENST00000636964 TP73-AS1Q9UF72 201 aa9.26□□□□□ -0.93
CLN6-217ENST00000636964 FOXA2Q9Y261 457 aaPredicted RBP9.26□□□□□ -0.93
CLN6-217ENST00000636964 A0A1W2PRD5 423 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 A0A1W2PRF3 423 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 A0A1W2PRM7 423 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 B5MCH6 92 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 FAM71F2Q6NXP2 309 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 LINC00311Q8N616 119 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 OR1B1Q8NGR6 318 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 RCHY1Q96PM5 261 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 UHRF2Q96PU4 802 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 ENY2Q9NPA8 101 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 CELSR1Q9NYQ6 3014 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 CUBNO60494 3623 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 KRTDAPP60985 99 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 HLA-DRB5Q30154 266 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 PNKDQ8N490 385 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 EAF1Q96JC9 268 aaPredicted RBP9.25□□□□□ -0.93
CLN6-217ENST00000636964 UQCR10Q9UDW1 63 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 TEX50A0A1B0GTY4 177 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 C11orf94C9JXX5 98 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 NDUFB4O95168 129 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 POU2AF1Q16633 256 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 GCSAMLQ5JQS6 135 aa9.25□□□□□ -0.93
CLN6-217ENST00000636964 BBC3Q96PG8 261 aaPredicted RBP9.25□□□□□ -0.93
CLN6-217ENST00000636964 MRPL18Q9H0U6 180 aaKnown RBP9.25□□□□□ -0.93
CLN6-217ENST00000636964 CTXND1A0A1B0GTU2 59 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 DIRC3C9JPN6 131 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 E7EUB6 86 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 CA2P00918 260 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 GPX1P07203 203 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 CRISP2P16562 243 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 GPR6P46095 362 aaPredicted RBP9.24□□□□□ -0.93
CLN6-217ENST00000636964 C10orf55Q5SWW7 151 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 OR4B1Q8NGF8 309 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 OR10G9Q8NGN4 311 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 OR10G7Q8NGN6 311 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 OR4C13Q8NGP0 309 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 OSR1Q8TAX0 266 aaPredicted RBP9.24□□□□□ -0.93
CLN6-217ENST00000636964 CLEC7AQ9BXN2 247 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 PRNDQ9UKY0 176 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 IGLV1-47P01700 117 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 GAGE5Q13069 117 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 GAGE6Q13070 117 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 MOB3BQ86TA1 216 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 Q8N7P7 452 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 BTF3L4Q96K17 158 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 SSBP3Q9BWW4 388 aaPredicted RBP9.24□□□□□ -0.93
CLN6-217ENST00000636964 WNT10AQ9GZT5 417 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 TPSG1Q9NRR2 321 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 WASHC3Q9Y3C0 194 aa9.24□□□□□ -0.93
CLN6-217ENST00000636964 NOTCH2Q04721 2471 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 ZNF462Q96JM2 2506 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 FSTL3O95633 263 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 CD99P14209 185 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 CNTFRP26992 372 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 KLRD1Q13241 179 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 C8orf31Q8N9H6 132 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 OR10G8Q8NGN5 311 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 NPCDR1Q9BY65 106 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 GNB4Q9HAV0 340 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 PLEKHA3Q9HB20 300 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 CSPG4Q6UVK1 2322 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.23□□□□□ -0.93
CLN6-217ENST00000636964 BUB1B-PAK6H3BSN5 160 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 SLC17A3O00476 420 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 NPY1RP25929 384 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 ATOH7Q8N100 152 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 INSIG2Q9Y5U4 225 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 K7EN84 100 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 IGFBP2P18065 325 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 KIAA1644Q3SXP7 199 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 SPATA31B1PQ5VZV4 182 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 BLNKQ8WV28 456 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 COMMD5Q9GZQ3 224 aa9.23□□□□□ -0.93
CLN6-217ENST00000636964 AMTP48728 403 aa9.22□□□□□ -0.93
CLN6-217ENST00000636964 RPL8P62917 257 aaKnown RBP9.22□□□□□ -0.93
CLN6-217ENST00000636964 PDPNQ86YL7 162 aa9.22□□□□□ -0.93
CLN6-217ENST00000636964 NRN1Q9NPD7 142 aa9.22□□□□□ -0.93
CLN6-217ENST00000636964 TNFRSF6BO95407 300 aa9.22□□□□□ -0.93
CLN6-217ENST00000636964 IGLV2-23P01705 113 aa9.22□□□□□ -0.93
CLN6-217ENST00000636964 APELAP0DMC3 54 aa9.22□□□□□ -0.93
CLN6-217ENST00000636964 ZFP36P26651 326 aaKnown RBP9.22□□□□□ -0.93
CLN6-217ENST00000636964 TSPOP30536 169 aa9.22□□□□□ -0.93
CLN6-217ENST00000636964 ZNF137PP52743 207 aa9.22□□□□□ -0.93
CLN6-217ENST00000636964 PRCDQ00LT1 54 aa9.22□□□□□ -0.93
CLN6-217ENST00000636964 MLANAQ16655 118 aa9.22□□□□□ -0.93
CLN6-217ENST00000636964 LY6G5BQ8NDX9 201 aa9.22□□□□□ -0.93
CLN6-217ENST00000636964 OR4F17Q8NGA8 305 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms