RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 BEAN1Q3B7T3 259 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 CD300EQ496F6 205 aaPredicted RBP12.08□□□□□ -0.48
CLN6-216ENST00000636876 KPRPQ5T749 579 aaPredicted RBP12.08□□□□□ -0.48
CLN6-216ENST00000636876 PXDC1Q5TGL8 231 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 MIC13Q5XKP0 118 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 STPG3Q8N7X2 389 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 ZNF709Q8N972 641 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 OR1B1Q8NGR6 318 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 SCGB1C1Q8TD33 95 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 NEURL2Q9BR09 285 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 ARL6Q9H0F7 186 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 TMEM231Q9H6L2 316 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 PFDN2Q9UHV9 154 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 SELENOKQ9Y6D0 94 aa12.08□□□□□ -0.48
CLN6-216ENST00000636876 PRKDCP78527 4128 aaKnown RBP12.08□□□□□ -0.48
CLN6-216ENST00000636876 IGHV3-66A0A0C4DH42 116 aa12.07□□□□□ -0.48
CLN6-216ENST00000636876 HYPMO75409 117 aa12.07□□□□□ -0.48
CLN6-216ENST00000636876 ZNF345Q14585 488 aa12.07□□□□□ -0.48
CLN6-216ENST00000636876 LCN12Q6JVE5 192 aa12.07□□□□□ -0.48
CLN6-216ENST00000636876 KCNRGQ8N5I3 272 aa12.07□□□□□ -0.48
CLN6-216ENST00000636876 RNF2Q99496 336 aa12.07□□□□□ -0.48
CLN6-216ENST00000636876 KCNIP2Q9NS61 270 aa12.07□□□□□ -0.48
CLN6-216ENST00000636876 SLC39A9Q9NUM3 307 aa12.07□□□□□ -0.48
CLN6-216ENST00000636876 DOK5Q9P104 306 aa12.07□□□□□ -0.48
CLN6-216ENST00000636876 ZMAT5Q9UDW3 170 aaKnown RBP12.07□□□□□ -0.48
CLN6-216ENST00000636876 PXMP4Q9Y6I8 212 aa12.07□□□□□ -0.48
CLN6-216ENST00000636876 IZUMO1RA6ND01 250 aa12.06□□□□□ -0.48
CLN6-216ENST00000636876 C17orf112F2Z3M2 114 aa12.06□□□□□ -0.48
CLN6-216ENST00000636876 TAAR5O14804 337 aa12.06□□□□□ -0.48
CLN6-216ENST00000636876 CXCL2P19875 107 aa12.06□□□□□ -0.48
CLN6-216ENST00000636876 B2MP61769 119 aa12.06□□□□□ -0.48
CLN6-216ENST00000636876 PATE2Q6UY27 113 aa12.06□□□□□ -0.48
CLN6-216ENST00000636876 TMEM61Q8N0U2 210 aa12.06□□□□□ -0.48
CLN6-216ENST00000636876 PPP1R14BQ96C90 147 aa12.06□□□□□ -0.48
CLN6-216ENST00000636876 GRAMD2BQ96HH9 432 aa12.06□□□□□ -0.48
CLN6-216ENST00000636876 RSG1Q9BU20 258 aa12.06□□□□□ -0.48
CLN6-216ENST00000636876 HIGD1AQ9Y241 93 aa12.06□□□□□ -0.48
CLN6-216ENST00000636876 BORCS7-ASMTA0A0B4J1R7 106 aa12.05□□□□□ -0.48
CLN6-216ENST00000636876 TRAV25A0A0B4J276 109 aa12.05□□□□□ -0.48
CLN6-216ENST00000636876 A0A0D9SG52 128 aa12.05□□□□□ -0.48
CLN6-216ENST00000636876 BUB3O43684 328 aa12.05□□□□□ -0.48
CLN6-216ENST00000636876 COX7A2P2O60397 106 aa12.05□□□□□ -0.48
CLN6-216ENST00000636876 OR5G3P0C626 314 aa12.05□□□□□ -0.48
CLN6-216ENST00000636876 S100A7P31151 101 aa12.05□□□□□ -0.48
CLN6-216ENST00000636876 KRTAP10-11P60412 298 aa12.05□□□□□ -0.48
CLN6-216ENST00000636876 FAM90A2PQ658T7 463 aa12.05□□□□□ -0.48
CLN6-216ENST00000636876 RPL7L1Q6DKI1 246 aaKnown RBP12.05□□□□□ -0.48
CLN6-216ENST00000636876 LAMTOR1Q6IAA8 161 aa12.05□□□□□ -0.48
CLN6-216ENST00000636876 C16orf54Q6UWD8 224 aa12.05□□□□□ -0.48
CLN6-216ENST00000636876 Q6ZRG5 221 aa12.05□□□□□ -0.48
CLN6-216ENST00000636876 TCF24Q7RTU0 167 aa12.05□□□□□ -0.48
CLN6-216ENST00000636876 GLMPQ8WWB7 406 aa12.05□□□□□ -0.48
CLN6-216ENST00000636876 ELOA3CA0A087WX78 387 aaPredicted RBP12.04□□□□□ -0.48
CLN6-216ENST00000636876 H3BRN7 92 aa12.04□□□□□ -0.48
CLN6-216ENST00000636876 CD5P06127 495 aa12.04□□□□□ -0.48
CLN6-216ENST00000636876 C1orf194Q5T5A4 169 aa12.04□□□□□ -0.48
CLN6-216ENST00000636876 RBPMS2Q6ZRY4 209 aaKnown RBP12.04□□□□□ -0.48
CLN6-216ENST00000636876 S100A7AQ86SG5 101 aa12.04□□□□□ -0.48
CLN6-216ENST00000636876 OR1L4Q8NGR5 311 aa12.04□□□□□ -0.48
CLN6-216ENST00000636876 HYLS1Q96M11 299 aa12.04□□□□□ -0.48
CLN6-216ENST00000636876 SHANK2-AS3Q9BTD1 123 aa12.04□□□□□ -0.48
CLN6-216ENST00000636876 SLC25A39Q9BZJ4 359 aaPredicted RBP12.04□□□□□ -0.48
CLN6-216ENST00000636876 ARV1Q9H2C2 271 aa12.04□□□□□ -0.48
CLN6-216ENST00000636876 ZNF98A6NK75 572 aa12.03□□□□□ -0.48
CLN6-216ENST00000636876 ZNF785A8K8V0 405 aa12.03□□□□□ -0.48
CLN6-216ENST00000636876 TSPAN4O14817 238 aa12.03□□□□□ -0.48
CLN6-216ENST00000636876 ZFP69Q49AA0 526 aa12.03□□□□□ -0.48
CLN6-216ENST00000636876 C10orf113Q5VZT2 155 aa12.03□□□□□ -0.48
CLN6-216ENST00000636876 HSD17B11Q8NBQ5 300 aa12.03□□□□□ -0.48
CLN6-216ENST00000636876 TMEM37Q8WXS4 190 aa12.03□□□□□ -0.48
CLN6-216ENST00000636876 UHRF2Q96PU4 802 aa12.03□□□□□ -0.48
CLN6-216ENST00000636876 PFDN5Q99471 154 aa12.03□□□□□ -0.48
CLN6-216ENST00000636876 ARPC5LQ9BPX5 153 aa12.03□□□□□ -0.48
CLN6-216ENST00000636876 SCRT1Q9BWW7 348 aa12.03□□□□□ -0.48
CLN6-216ENST00000636876 DNAJC4Q9NNZ3 241 aa12.03□□□□□ -0.48
CLN6-216ENST00000636876 CYTL1Q9NRR1 136 aa12.03□□□□□ -0.48
CLN6-216ENST00000636876 ZNF256Q9Y2P7 627 aaPredicted RBP12.03□□□□□ -0.48
CLN6-216ENST00000636876 TIMM9Q9Y5J7 89 aa12.03□□□□□ -0.48
CLN6-216ENST00000636876 RFNGQ9Y644 331 aa12.03□□□□□ -0.48
CLN6-216ENST00000636876 BCL2L11O43521 198 aa12.02□□□□□ -0.49
CLN6-216ENST00000636876 JTBO76095 146 aa12.02□□□□□ -0.49
CLN6-216ENST00000636876 GP9P14770 177 aa12.02□□□□□ -0.49
CLN6-216ENST00000636876 ATP6V0CP27449 155 aa12.02□□□□□ -0.49
CLN6-216ENST00000636876 GUCA2BQ16661 112 aa12.02□□□□□ -0.49
CLN6-216ENST00000636876 FFAR4Q5NUL3 377 aa12.02□□□□□ -0.49
CLN6-216ENST00000636876 TMUB2Q71RG4 321 aa12.02□□□□□ -0.49
CLN6-216ENST00000636876 SPAG8Q99932 426 aaPredicted RBP12.02□□□□□ -0.49
CLN6-216ENST00000636876 KANTRA0A1W2PQU2 76 aa12.01□□□□□ -0.49
CLN6-216ENST00000636876 HELTA6NFD8 242 aa12.01□□□□□ -0.49
CLN6-216ENST00000636876 LGALSLQ3ZCW2 172 aaPredicted RBP12.01□□□□□ -0.49
CLN6-216ENST00000636876 GCSAMLQ5JQS6 135 aa12.01□□□□□ -0.49
CLN6-216ENST00000636876 LEMD1Q68G75 181 aa12.01□□□□□ -0.49
CLN6-216ENST00000636876 LINC00305Q7Z4B0 112 aa12.01□□□□□ -0.49
CLN6-216ENST00000636876 OR8I2Q8N0Y5 310 aa12.01□□□□□ -0.49
CLN6-216ENST00000636876 GATAD1Q8WUU5 269 aa12.01□□□□□ -0.49
CLN6-216ENST00000636876 PSMG3Q9BT73 122 aaPredicted RBP12.01□□□□□ -0.49
CLN6-216ENST00000636876 SLC25A22Q9H936 323 aa12.01□□□□□ -0.49
CLN6-216ENST00000636876 IGKV3-7A0A075B6H7 116 aa12□□□□□ -0.49
CLN6-216ENST00000636876 PFDN1O60925 122 aa12□□□□□ -0.49
CLN6-216ENST00000636876 RPL11P62913 178 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms