RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 DEDDO75618 318 aa12.98□□□□□ -0.33
PNKP-225ENST00000636214 MEOX2P50222 304 aa12.98□□□□□ -0.33
PNKP-225ENST00000636214 EBLN2Q6P2I7 272 aa12.98□□□□□ -0.33
PNKP-225ENST00000636214 RPP25LQ8N5L8 163 aaKnown RBP12.98□□□□□ -0.33
PNKP-225ENST00000636214 THAP8Q8NA92 274 aa12.98□□□□□ -0.33
PNKP-225ENST00000636214 CSNK1G2-AS1Q8NCQ2 148 aa12.98□□□□□ -0.33
PNKP-225ENST00000636214 OR4B1Q8NGF8 309 aa12.98□□□□□ -0.33
PNKP-225ENST00000636214 SRRQ9GZT4 340 aa12.98□□□□□ -0.33
PNKP-225ENST00000636214 ELOA3CA0A087WX78 387 aaPredicted RBP12.97□□□□□ -0.33
PNKP-225ENST00000636214 H3BP45 60 aa12.97□□□□□ -0.33
PNKP-225ENST00000636214 ISLRO14498 428 aa12.97□□□□□ -0.33
PNKP-225ENST00000636214 IGKV3-20P01619 116 aa12.97□□□□□ -0.33
PNKP-225ENST00000636214 SPATA31B1PQ5VZV4 182 aa12.97□□□□□ -0.33
PNKP-225ENST00000636214 Q6ZTC4 211 aa12.97□□□□□ -0.33
PNKP-225ENST00000636214 C16orf92Q96LL3 132 aa12.97□□□□□ -0.33
PNKP-225ENST00000636214 TMEM147Q9BVK8 224 aa12.97□□□□□ -0.33
PNKP-225ENST00000636214 WDR12Q9GZL7 423 aaKnown RBP12.97□□□□□ -0.33
PNKP-225ENST00000636214 SAV1Q9H4B6 383 aaPredicted RBP12.97□□□□□ -0.33
PNKP-225ENST00000636214 SLC25A22Q9H936 323 aa12.97□□□□□ -0.33
PNKP-225ENST00000636214 SLC45A2Q9UMX9 530 aa12.97□□□□□ -0.33
PNKP-225ENST00000636214 KMT2AQ03164 3969 aa12.96□□□□□ -0.33
PNKP-225ENST00000636214 C9orf170A2RU37 121 aa12.96□□□□□ -0.33
PNKP-225ENST00000636214 NDUFB6O95139 128 aa12.96□□□□□ -0.33
PNKP-225ENST00000636214 RPRMQ9NS64 109 aa12.96□□□□□ -0.33
PNKP-225ENST00000636214 IGHV3OR16-12A0A075B7B8 117 aa12.95□□□□□ -0.34
PNKP-225ENST00000636214 LINC00854A0A1B0GVQ3 168 aa12.95□□□□□ -0.34
PNKP-225ENST00000636214 ORM2P19652 201 aa12.95□□□□□ -0.34
PNKP-225ENST00000636214 C4orf46Q504U0 113 aa12.95□□□□□ -0.34
PNKP-225ENST00000636214 ACOT7LQ6ZUV0 252 aa12.95□□□□□ -0.34
PNKP-225ENST00000636214 OR1B1Q8NGR6 318 aa12.95□□□□□ -0.34
PNKP-225ENST00000636214 GPR82Q96P67 336 aa12.95□□□□□ -0.34
PNKP-225ENST00000636214 RBM38Q9H0Z9 239 aaKnown RBP12.95□□□□□ -0.34
PNKP-225ENST00000636214 PSENENQ9NZ42 101 aa12.95□□□□□ -0.34
PNKP-225ENST00000636214 IGKV1OR2-108A0A075B7D4 117 aa12.94□□□□□ -0.34
PNKP-225ENST00000636214 TMEM189A5PLL7 270 aa12.94□□□□□ -0.34
PNKP-225ENST00000636214 ADAP1O75689 374 aa12.94□□□□□ -0.34
PNKP-225ENST00000636214 FXYD7P58549 80 aa12.94□□□□□ -0.34
PNKP-225ENST00000636214 S100A7AQ86SG5 101 aa12.94□□□□□ -0.34
PNKP-225ENST00000636214 C7orf50Q9BRJ6 194 aaKnown RBP12.94□□□□□ -0.34
PNKP-225ENST00000636214 IGHV4-4A0A075B6R2 117 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 SMIM9A6NGZ8 99 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 ZNF98A6NK75 572 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 SSSCA1O60232 199 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 SCGB1D2O95969 90 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 OR4E1P0C645 316 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 RAP2BP61225 183 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 POLR2GP62487 172 aaKnown RBP eCLIP12.93□□□□□ -0.34
PNKP-225ENST00000636214 PSG9Q00887 426 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 BAK1Q16611 211 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 GDF5OSQ5U4N7 250 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 TMEM144Q7Z5S9 345 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 NEU1Q99519 415 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 RSG1Q9BU20 258 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 SLC25A32Q9H2D1 315 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 APLNQ9ULZ1 77 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 CELA1Q9UNI1 258 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 FLVCR2Q9UPI3 526 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 GOLT1BQ9Y3E0 138 aa12.93□□□□□ -0.34
PNKP-225ENST00000636214 DEFB131BA0A096LNP1 70 aa12.92□□□□□ -0.34
PNKP-225ENST00000636214 TEX48A0A1B0GUV7 120 aa12.92□□□□□ -0.34
PNKP-225ENST00000636214 PRSS46E5RG02 174 aa12.92□□□□□ -0.34
PNKP-225ENST00000636214 SOCS3O14543 225 aa12.92□□□□□ -0.34
PNKP-225ENST00000636214 IL5P05113 134 aa12.92□□□□□ -0.34
PNKP-225ENST00000636214 EMP1P54849 157 aa12.92□□□□□ -0.34
PNKP-225ENST00000636214 DEFB1P60022 68 aa12.92□□□□□ -0.34
PNKP-225ENST00000636214 CLUHP3Q96NS8 147 aa12.92□□□□□ -0.34
PNKP-225ENST00000636214 RNF126Q9BV68 326 aa12.92□□□□□ -0.34
PNKP-225ENST00000636214 RFNGQ9Y644 331 aa12.92□□□□□ -0.34
PNKP-225ENST00000636214 SPART-AS1P0CW21 52 aa12.91□□□□□ -0.34
PNKP-225ENST00000636214 GATA2P23769 480 aaPredicted RBP12.91□□□□□ -0.34
PNKP-225ENST00000636214 PAX9P55771 341 aa12.91□□□□□ -0.34
PNKP-225ENST00000636214 ID3Q02535 119 aa12.91□□□□□ -0.34
PNKP-225ENST00000636214 FGL1Q08830 312 aa12.91□□□□□ -0.34
PNKP-225ENST00000636214 C12orf74Q32Q52 190 aa12.91□□□□□ -0.34
PNKP-225ENST00000636214 CNPY1Q3B7I2 92 aa12.91□□□□□ -0.34
PNKP-225ENST00000636214 FAM78BQ5VT40 261 aa12.91□□□□□ -0.34
PNKP-225ENST00000636214 ZNF705AQ6ZN79 300 aaPredicted RBP12.91□□□□□ -0.34
PNKP-225ENST00000636214 ZNF767PQ75MW2 155 aa12.91□□□□□ -0.34
PNKP-225ENST00000636214 OR4D5Q8NGN0 318 aa12.91□□□□□ -0.34
PNKP-225ENST00000636214 DOK5Q9P104 306 aa12.91□□□□□ -0.34
PNKP-225ENST00000636214 MGAT4CQ9UBM8 478 aa12.91□□□□□ -0.34
PNKP-225ENST00000636214 HIGD1AQ9Y241 93 aa12.91□□□□□ -0.34
PNKP-225ENST00000636214 A0A0J9YX75 114 aa12.9□□□□□ -0.34
PNKP-225ENST00000636214 HBE1P02100 147 aa12.9□□□□□ -0.34
PNKP-225ENST00000636214 ANXA7P20073 488 aaKnown RBP12.9□□□□□ -0.34
PNKP-225ENST00000636214 IAH1Q2TAA2 248 aaPredicted RBP12.9□□□□□ -0.34
PNKP-225ENST00000636214 CYP2G1PQ6ZSU1 146 aa12.9□□□□□ -0.34
PNKP-225ENST00000636214 TMEM208Q9BTX3 173 aa12.9□□□□□ -0.34
PNKP-225ENST00000636214 NDUFAF3Q9BU61 184 aa12.9□□□□□ -0.34
PNKP-225ENST00000636214 ZNF705FA8MVS1 300 aaPredicted RBP12.89□□□□□ -0.35
PNKP-225ENST00000636214 F6UB75 175 aa12.89□□□□□ -0.35
PNKP-225ENST00000636214 HYPMO75409 117 aa12.89□□□□□ -0.35
PNKP-225ENST00000636214 OR5G3P0C626 314 aa12.89□□□□□ -0.35
PNKP-225ENST00000636214 ZNF705DP0CH99 300 aaPredicted RBP12.89□□□□□ -0.35
PNKP-225ENST00000636214 ZNF705BP0CI00 300 aaPredicted RBP12.89□□□□□ -0.35
PNKP-225ENST00000636214 RPL7P18124 248 aaKnown RBP12.89□□□□□ -0.35
PNKP-225ENST00000636214 RRAS2P62070 204 aaPredicted RBP12.89□□□□□ -0.35
PNKP-225ENST00000636214 SELENOTP62341 195 aa12.89□□□□□ -0.35
PNKP-225ENST00000636214 OR10P1Q8NGE3 313 aa12.89□□□□□ -0.35
PNKP-225ENST00000636214 SMIM8Q96KF7 97 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms