RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 DNASE2O00115 360 aaPredicted RBP10.08□□□□□ -0.8
SOX2-OT-248ENST00000628496 CFDP00746 253 aaPredicted RBP10.08□□□□□ -0.8
SOX2-OT-248ENST00000628496 CXCL3P19876 107 aa10.08□□□□□ -0.8
SOX2-OT-248ENST00000628496 ZNF124Q15973 351 aa10.08□□□□□ -0.8
SOX2-OT-248ENST00000628496 RGS21Q2M5E4 152 aa10.08□□□□□ -0.8
SOX2-OT-248ENST00000628496 TEPPQ6URK8 271 aa10.08□□□□□ -0.8
SOX2-OT-248ENST00000628496 STXBP6Q8NFX7 210 aa10.08□□□□□ -0.8
SOX2-OT-248ENST00000628496 DCANP1Q8TF63 244 aa10.08□□□□□ -0.8
SOX2-OT-248ENST00000628496 PPP1R1CQ8WVI7 109 aa10.08□□□□□ -0.8
SOX2-OT-248ENST00000628496 TM2D3Q9BRN9 247 aa10.08□□□□□ -0.8
SOX2-OT-248ENST00000628496 MAP6D1Q9H9H5 199 aa10.08□□□□□ -0.8
SOX2-OT-248ENST00000628496 HELTA6NFD8 242 aa10.07□□□□□ -0.8
SOX2-OT-248ENST00000628496 E5RGE8 158 aa10.07□□□□□ -0.8
SOX2-OT-248ENST00000628496 K7EQG2 157 aa10.07□□□□□ -0.8
SOX2-OT-248ENST00000628496 RLN2P04090 185 aa10.07□□□□□ -0.8
SOX2-OT-248ENST00000628496 ORM2P19652 201 aa10.07□□□□□ -0.8
SOX2-OT-248ENST00000628496 NUP62P37198 522 aaPredicted RBP10.07□□□□□ -0.8
SOX2-OT-248ENST00000628496 VWC2Q2TAL6 325 aa10.07□□□□□ -0.8
SOX2-OT-248ENST00000628496 SIGLEC15Q6ZMC9 328 aa10.07□□□□□ -0.8
SOX2-OT-248ENST00000628496 STX12Q86Y82 276 aa10.07□□□□□ -0.8
SOX2-OT-248ENST00000628496 APRG1Q8IVJ8 170 aa10.07□□□□□ -0.8
SOX2-OT-248ENST00000628496 MGST2Q99735 147 aa10.07□□□□□ -0.8
SOX2-OT-248ENST00000628496 COL7A1Q02388 2944 aa10.06□□□□□ -0.8
SOX2-OT-248ENST00000628496 LINC00869P0C866 280 aa10.06□□□□□ -0.8
SOX2-OT-248ENST00000628496 SELENOTP62341 195 aa10.06□□□□□ -0.8
SOX2-OT-248ENST00000628496 EWSR1Q01844 656 aaKnown RBP eCLIP10.06□□□□□ -0.8
SOX2-OT-248ENST00000628496 OXA1LQ15070 435 aa10.06□□□□□ -0.8
SOX2-OT-248ENST00000628496 FCN2Q15485 313 aa10.06□□□□□ -0.8
SOX2-OT-248ENST00000628496 OR1B1Q8NGR6 318 aa10.06□□□□□ -0.8
SOX2-OT-248ENST00000628496 PPP1R14BQ96C90 147 aa10.06□□□□□ -0.8
SOX2-OT-248ENST00000628496 RNF126Q9BV68 326 aa10.06□□□□□ -0.8
SOX2-OT-248ENST00000628496 UQCC1Q9NVA1 299 aa10.06□□□□□ -0.8
SOX2-OT-248ENST00000628496 DOK5Q9P104 306 aa10.06□□□□□ -0.8
SOX2-OT-248ENST00000628496 PFDN2Q9UHV9 154 aa10.06□□□□□ -0.8
SOX2-OT-248ENST00000628496 SLC45A2Q9UMX9 530 aa10.06□□□□□ -0.8
SOX2-OT-248ENST00000628496 U3KQK5 164 aa10.06□□□□□ -0.8
SOX2-OT-248ENST00000628496 AGPAT2O15120 278 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 MPC2O95563 127 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 S100A11P31949 105 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 AP2S1P53680 142 aaPredicted RBP10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 PLP1P60201 277 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 HBG1P69891 147 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 HBG2P69892 147 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 NHLH2Q02577 135 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 C1orf194Q5T5A4 169 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 LINC00528Q8N1L1 170 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 OR11H7Q8NGC8 314 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 RCHY1Q96PM5 261 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 TMEM147Q9BVK8 224 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 GGTLC1Q9BX51 225 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 MED28Q9H204 178 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 NRN1Q9NPD7 142 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 WDR83OSQ9Y284 106 aa10.05□□□□□ -0.8
SOX2-OT-248ENST00000628496 LOC102724200A0A096LPH7 203 aaPredicted RBP10.04□□□□□ -0.8
SOX2-OT-248ENST00000628496 UBE2L5PA0A1B0GUS4 154 aa10.04□□□□□ -0.8
SOX2-OT-248ENST00000628496 ZNF98A6NK75 572 aa10.04□□□□□ -0.8
SOX2-OT-248ENST00000628496 ZNF688P0C7X2 276 aa10.04□□□□□ -0.8
SOX2-OT-248ENST00000628496 CMC4P56277 68 aaPredicted RBP10.04□□□□□ -0.8
SOX2-OT-248ENST00000628496 DEFB131AP59861 70 aa10.04□□□□□ -0.8
SOX2-OT-248ENST00000628496 LEMD1Q68G75 181 aa10.04□□□□□ -0.8
SOX2-OT-248ENST00000628496 ZNF546Q86UE3 836 aa10.04□□□□□ -0.8
SOX2-OT-248ENST00000628496 SCRT1Q9BWW7 348 aa10.04□□□□□ -0.8
SOX2-OT-248ENST00000628496 SLC25A39Q9BZJ4 359 aaPredicted RBP10.04□□□□□ -0.8
SOX2-OT-248ENST00000628496 SLC25A31Q9H0C2 315 aa10.04□□□□□ -0.8
SOX2-OT-248ENST00000628496 SLC25A32Q9H2D1 315 aa10.04□□□□□ -0.8
SOX2-OT-248ENST00000628496 ZMAT4Q9H898 229 aa10.04□□□□□ -0.8
SOX2-OT-248ENST00000628496 RETNQ9HD89 108 aa10.04□□□□□ -0.8
SOX2-OT-248ENST00000628496 MBD2Q9UBB5 411 aa10.04□□□□□ -0.8
SOX2-OT-248ENST00000628496 H3BRN7 92 aa10.03□□□□□ -0.8
SOX2-OT-248ENST00000628496 HYPMO75409 117 aa10.03□□□□□ -0.8
SOX2-OT-248ENST00000628496 PET100P0DJ07 73 aa10.03□□□□□ -0.8
SOX2-OT-248ENST00000628496 CAMLGP49069 296 aa10.03□□□□□ -0.8
SOX2-OT-248ENST00000628496 ATP6V1FQ16864 119 aa10.03□□□□□ -0.8
SOX2-OT-248ENST00000628496 PATE2Q6UY27 113 aa10.03□□□□□ -0.8
SOX2-OT-248ENST00000628496 OR8I2Q8N0Y5 310 aa10.03□□□□□ -0.8
SOX2-OT-248ENST00000628496 OR5C1Q8NGR4 320 aa10.03□□□□□ -0.8
SOX2-OT-248ENST00000628496 UHRF2Q96PU4 802 aa10.03□□□□□ -0.8
SOX2-OT-248ENST00000628496 SPATA25Q9BR10 227 aa10.03□□□□□ -0.8
SOX2-OT-248ENST00000628496 SHANK2-AS3Q9BTD1 123 aa10.03□□□□□ -0.8
SOX2-OT-248ENST00000628496 ARL6Q9H0F7 186 aa10.03□□□□□ -0.8
SOX2-OT-248ENST00000628496 SLC25A22Q9H936 323 aa10.03□□□□□ -0.8
SOX2-OT-248ENST00000628496 FBXL17Q9UF56 701 aa10.03□□□□□ -0.8
SOX2-OT-248ENST00000628496 HIGD1AQ9Y241 93 aa10.03□□□□□ -0.8
SOX2-OT-248ENST00000628496 OR5G3P0C626 314 aa10.02□□□□□ -0.81
SOX2-OT-248ENST00000628496 RPL35AP18077 110 aaKnown RBP10.02□□□□□ -0.81
SOX2-OT-248ENST00000628496 RAP2BP61225 183 aa10.02□□□□□ -0.81
SOX2-OT-248ENST00000628496 BAXQ07812 192 aa10.02□□□□□ -0.81
SOX2-OT-248ENST00000628496 MIC13Q5XKP0 118 aa10.02□□□□□ -0.81
SOX2-OT-248ENST00000628496 C17orf77Q96MU5 243 aa10.02□□□□□ -0.81
SOX2-OT-248ENST00000628496 ARV1Q9H2C2 271 aa10.02□□□□□ -0.81
SOX2-OT-248ENST00000628496 HUWE1Q7Z6Z7 4374 aaKnown RBP10.01□□□□□ -0.81
SOX2-OT-248ENST00000628496 SOCS3O14543 225 aa10.01□□□□□ -0.81
SOX2-OT-248ENST00000628496 LYL1P12980 280 aa10.01□□□□□ -0.81
SOX2-OT-248ENST00000628496 FGF7P21781 194 aa10.01□□□□□ -0.81
SOX2-OT-248ENST00000628496 RAB31Q13636 194 aa10.01□□□□□ -0.81
SOX2-OT-248ENST00000628496 CLINT1Q14677 625 aa10.01□□□□□ -0.81
SOX2-OT-248ENST00000628496 OPCMLQ14982 345 aa10.01□□□□□ -0.81
SOX2-OT-248ENST00000628496 PSMG4Q5JS54 123 aa10.01□□□□□ -0.81
SOX2-OT-248ENST00000628496 PXDC1Q5TGL8 231 aa10.01□□□□□ -0.81
SOX2-OT-248ENST00000628496 THAP6Q8TBB0 222 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms