RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 ST6GAL2Q96JF0 529 aa11.1□□□□□ -0.63
PNKP-221ENST00000627317 DOK5Q9P104 306 aa11.1□□□□□ -0.63
PNKP-221ENST00000627317 ZNF256Q9Y2P7 627 aaPredicted RBP11.1□□□□□ -0.63
PNKP-221ENST00000627317 RNF222A6NCQ9 220 aa11.09□□□□□ -0.63
PNKP-221ENST00000627317 S100A7P31151 101 aa11.09□□□□□ -0.63
PNKP-221ENST00000627317 OPCMLQ14982 345 aa11.09□□□□□ -0.63
PNKP-221ENST00000627317 GUCA2BQ16661 112 aa11.09□□□□□ -0.63
PNKP-221ENST00000627317 TMEM61Q8N0U2 210 aa11.09□□□□□ -0.63
PNKP-221ENST00000627317 STPG3Q8N7X2 389 aa11.09□□□□□ -0.63
PNKP-221ENST00000627317 SCGB1C1Q8TD33 95 aa11.09□□□□□ -0.63
PNKP-221ENST00000627317 RNF2Q99496 336 aa11.09□□□□□ -0.63
PNKP-221ENST00000627317 NPCDR1Q9BY65 106 aa11.09□□□□□ -0.63
PNKP-221ENST00000627317 WDR61Q9GZS3 305 aaKnown RBP11.09□□□□□ -0.63
PNKP-221ENST00000627317 ARL6Q9H0F7 186 aa11.09□□□□□ -0.63
PNKP-221ENST00000627317 VSIRQ9H7M9 311 aa11.09□□□□□ -0.63
PNKP-221ENST00000627317 KCNIP2Q9NS61 270 aa11.09□□□□□ -0.63
PNKP-221ENST00000627317 SORL1Q92673 2214 aa11.09□□□□□ -0.63
PNKP-221ENST00000627317 TRAV25A0A0B4J276 109 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 IZUMO1RA6ND01 250 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 HYPMO75409 117 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 CD5P06127 495 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 OR5G3P0C626 314 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 GP9P14770 177 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 ZNF266Q14584 549 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 PXDC1Q5TGL8 231 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 MIC13Q5XKP0 118 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 TCF24Q7RTU0 167 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 S100A7AQ86SG5 101 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 TCTE3Q8IZS6 198 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 PRR25Q96S07 402 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 WFDC1Q9HC57 220 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 HIGD1AQ9Y241 93 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 PXMP4Q9Y6I8 212 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 U3KQE9 123 aa11.08□□□□□ -0.64
PNKP-221ENST00000627317 C17orf112F2Z3M2 114 aa11.07□□□□□ -0.64
PNKP-221ENST00000627317 COX7A2P2O60397 106 aa11.07□□□□□ -0.64
PNKP-221ENST00000627317 RPL29P47914 159 aaKnown RBP11.07□□□□□ -0.64
PNKP-221ENST00000627317 PLP1P60201 277 aa11.07□□□□□ -0.64
PNKP-221ENST00000627317 B2MP61769 119 aa11.07□□□□□ -0.64
PNKP-221ENST00000627317 RPL11P62913 178 aaKnown RBP11.07□□□□□ -0.64
PNKP-221ENST00000627317 Q6ZRG5 221 aa11.07□□□□□ -0.64
PNKP-221ENST00000627317 B9D2Q9BPU9 175 aa11.07□□□□□ -0.64
PNKP-221ENST00000627317 MFFQ9GZY8 342 aa11.07□□□□□ -0.64
PNKP-221ENST00000627317 SLC39A9Q9NUM3 307 aa11.07□□□□□ -0.64
PNKP-221ENST00000627317 TENM3Q9P273 2699 aa11.07□□□□□ -0.64
PNKP-221ENST00000627317 STAB2Q8WWQ8 2551 aa11.07□□□□□ -0.64
PNKP-221ENST00000627317 IGKV3-7A0A075B6H7 116 aa11.06□□□□□ -0.64
PNKP-221ENST00000627317 HELTA6NFD8 242 aa11.06□□□□□ -0.64
PNKP-221ENST00000627317 HMSDA8MTL9 139 aa11.06□□□□□ -0.64
PNKP-221ENST00000627317 TSPAN4O14817 238 aa11.06□□□□□ -0.64
PNKP-221ENST00000627317 PRR20EP86478 221 aa11.06□□□□□ -0.64
PNKP-221ENST00000627317 PRR20CP86479 221 aa11.06□□□□□ -0.64
PNKP-221ENST00000627317 PRR20DP86480 221 aa11.06□□□□□ -0.64
PNKP-221ENST00000627317 PRR20BP86481 221 aa11.06□□□□□ -0.64
PNKP-221ENST00000627317 PRR20AP86496 221 aa11.06□□□□□ -0.64
PNKP-221ENST00000627317 C16orf54Q6UWD8 224 aa11.06□□□□□ -0.64
PNKP-221ENST00000627317 OR11H4Q8NGC9 324 aa11.06□□□□□ -0.64
PNKP-221ENST00000627317 GLMPQ8WWB7 406 aa11.06□□□□□ -0.64
PNKP-221ENST00000627317 SPAG8Q99932 426 aaPredicted RBP11.06□□□□□ -0.64
PNKP-221ENST00000627317 PARD6GQ9BYG4 376 aaPredicted RBP11.06□□□□□ -0.64
PNKP-221ENST00000627317 BORCS7-ASMTA0A0B4J1R7 106 aa11.05□□□□□ -0.64
PNKP-221ENST00000627317 BUB3O43684 328 aa11.05□□□□□ -0.64
PNKP-221ENST00000627317 PAFAH1B2P68402 229 aa11.05□□□□□ -0.64
PNKP-221ENST00000627317 GTSCR1Q86UQ5 136 aa11.05□□□□□ -0.64
PNKP-221ENST00000627317 OR1L4Q8NGR5 311 aa11.05□□□□□ -0.64
PNKP-221ENST00000627317 PFDN5Q99471 154 aa11.05□□□□□ -0.64
PNKP-221ENST00000627317 RSG1Q9BU20 258 aa11.05□□□□□ -0.64
PNKP-221ENST00000627317 SLC25A39Q9BZJ4 359 aaPredicted RBP11.05□□□□□ -0.64
PNKP-221ENST00000627317 ARV1Q9H2C2 271 aa11.05□□□□□ -0.64
PNKP-221ENST00000627317 SLC25A22Q9H936 323 aa11.05□□□□□ -0.64
PNKP-221ENST00000627317 ELOA3CA0A087WX78 387 aaPredicted RBP11.04□□□□□ -0.64
PNKP-221ENST00000627317 OR4C46A6NHA9 309 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 ZNF98A6NK75 572 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 ZNF785A8K8V0 405 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 H3BRN7 92 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 TFPI2P48307 235 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 ZNF345Q14585 488 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 DEFB121Q5J5C9 76 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 C1orf194Q5T5A4 169 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 C10orf113Q5VZT2 155 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 FAM90A2PQ658T7 463 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 SIGLEC15Q6ZMC9 328 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 OR8I2Q8N0Y5 310 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 STXBP6Q8NFX7 210 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 UHRF2Q96PU4 802 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 NEURL2Q9BR09 285 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 SHANK2-AS3Q9BTD1 123 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 SCRT1Q9BWW7 348 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 RNF24Q9Y225 148 aa11.04□□□□□ -0.64
PNKP-221ENST00000627317 DNASE2O00115 360 aaPredicted RBP11.03□□□□□ -0.64
PNKP-221ENST00000627317 TAAR5O14804 337 aa11.03□□□□□ -0.64
PNKP-221ENST00000627317 C1QBP02746 253 aa11.03□□□□□ -0.64
PNKP-221ENST00000627317 LEMD1Q68G75 181 aa11.03□□□□□ -0.64
PNKP-221ENST00000627317 PATE2Q6UY27 113 aa11.03□□□□□ -0.64
PNKP-221ENST00000627317 LINC00305Q7Z4B0 112 aa11.03□□□□□ -0.64
PNKP-221ENST00000627317 GBGT1Q8N5D6 347 aa11.03□□□□□ -0.64
PNKP-221ENST00000627317 KCNRGQ8N5I3 272 aa11.03□□□□□ -0.64
PNKP-221ENST00000627317 HSD17B11Q8NBQ5 300 aa11.03□□□□□ -0.64
PNKP-221ENST00000627317 DNAJC4Q9NNZ3 241 aa11.03□□□□□ -0.64
PNKP-221ENST00000627317 A0A0D9SG52 128 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms