RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 HBE1P02100 147 aa16.89■□□□□ 0.29
CPSF1-214ENST00000622776 HTN3P15516 51 aa16.89■□□□□ 0.29
CPSF1-214ENST00000622776 PAX9P55771 341 aa16.89■□□□□ 0.29
CPSF1-214ENST00000622776 OXA1LQ15070 435 aa16.89■□□□□ 0.29
CPSF1-214ENST00000622776 RNF212Q495C1 297 aa16.89■□□□□ 0.29
CPSF1-214ENST00000622776 EBLN2Q6P2I7 272 aa16.89■□□□□ 0.29
CPSF1-214ENST00000622776 C1orf158Q8N1D5 194 aa16.89■□□□□ 0.29
CPSF1-214ENST00000622776 SNRPGP15A8MWD9 76 aa16.88■□□□□ 0.29
CPSF1-214ENST00000622776 F6UB75 175 aa16.88■□□□□ 0.29
CPSF1-214ENST00000622776 ISLRO14498 428 aa16.88■□□□□ 0.29
CPSF1-214ENST00000622776 FABP1P07148 127 aa16.88■□□□□ 0.29
CPSF1-214ENST00000622776 SMIM18P0DKX4 95 aa16.88■□□□□ 0.29
CPSF1-214ENST00000622776 OR2F1Q13607 317 aa16.88■□□□□ 0.29
CPSF1-214ENST00000622776 FAM78BQ5VT40 261 aa16.88■□□□□ 0.29
CPSF1-214ENST00000622776 PPP1R14BQ96C90 147 aa16.88■□□□□ 0.29
CPSF1-214ENST00000622776 C7orf50Q9BRJ6 194 aaKnown RBP16.88■□□□□ 0.29
CPSF1-214ENST00000622776 YTHDF2Q9Y5A9 579 aaKnown RBP16.88■□□□□ 0.29
CPSF1-214ENST00000622776 NACAE9PAV3 2078 aa16.87■□□□□ 0.29
CPSF1-214ENST00000622776 A0A0J9YX75 114 aa16.87■□□□□ 0.29
CPSF1-214ENST00000622776 LOC102723971A0A1B0GUV8 181 aa16.87■□□□□ 0.29
CPSF1-214ENST00000622776 IL18Q14116 193 aa16.87■□□□□ 0.29
CPSF1-214ENST00000622776 OR8I2Q8N0Y5 310 aa16.87■□□□□ 0.29
CPSF1-214ENST00000622776 SCGB3A2Q96PL1 93 aa16.87■□□□□ 0.29
CPSF1-214ENST00000622776 SCP2D1Q9UJQ7 156 aa16.87■□□□□ 0.29
CPSF1-214ENST00000622776 ANKRD20A5PA0PJZ0 165 aa16.86■□□□□ 0.29
CPSF1-214ENST00000622776 AKR1C4P17516 323 aa16.86■□□□□ 0.29
CPSF1-214ENST00000622776 RRN3P1Q2M238 152 aa16.86■□□□□ 0.29
CPSF1-214ENST00000622776 SOHLH1Q5JUK2 328 aa16.86■□□□□ 0.29
CPSF1-214ENST00000622776 OR1S1Q8NH92 325 aa16.86■□□□□ 0.29
CPSF1-214ENST00000622776 DIRAS2Q96HU8 199 aa16.86■□□□□ 0.29
CPSF1-214ENST00000622776 TRGV9Q99603 122 aa16.86■□□□□ 0.29
CPSF1-214ENST00000622776 SAMD13Q5VXD3 122 aa16.85■□□□□ 0.29
CPSF1-214ENST00000622776 RPRMQ9NS64 109 aa16.85■□□□□ 0.29
CPSF1-214ENST00000622776 RABL2AQ9UBK7 228 aaPredicted RBP16.85■□□□□ 0.29
CPSF1-214ENST00000622776 RABL2BQ9UNT1 228 aa16.85■□□□□ 0.29
CPSF1-214ENST00000622776 DAD1P61803 113 aa16.84■□□□□ 0.29
CPSF1-214ENST00000622776 SRPXP78539 464 aa16.84■□□□□ 0.29
CPSF1-214ENST00000622776 SPCS2Q15005 226 aa16.84■□□□□ 0.29
CPSF1-214ENST00000622776 TMEM88Q6PEY1 159 aa16.84■□□□□ 0.29
CPSF1-214ENST00000622776 C16orf92Q96LL3 132 aa16.84■□□□□ 0.29
CPSF1-214ENST00000622776 C20orf173Q96LM9 149 aa16.84■□□□□ 0.29
CPSF1-214ENST00000622776 MAGT1Q9H0U3 335 aa16.84■□□□□ 0.29
CPSF1-214ENST00000622776 ABCA13Q86UQ4 5058 aa16.84■□□□□ 0.29
CPSF1-214ENST00000622776 MEOX2P50222 304 aa16.83■□□□□ 0.28
CPSF1-214ENST00000622776 C1orf134Q5TEV5 83 aa16.83■□□□□ 0.28
CPSF1-214ENST00000622776 ZNF575Q86XF7 245 aa16.83■□□□□ 0.28
CPSF1-214ENST00000622776 DOK5Q9P104 306 aa16.83■□□□□ 0.28
CPSF1-214ENST00000622776 IGKV1OR2-108A0A075B7D4 117 aa16.82■□□□□ 0.28
CPSF1-214ENST00000622776 A8MTW9 85 aa16.82■□□□□ 0.28
CPSF1-214ENST00000622776 ANXA3P12429 323 aa16.82■□□□□ 0.28
CPSF1-214ENST00000622776 RAB11AP62491 216 aa16.82■□□□□ 0.28
CPSF1-214ENST00000622776 THAP8Q8NA92 274 aa16.82■□□□□ 0.28
CPSF1-214ENST00000622776 MCUBQ9NWR8 336 aa16.82■□□□□ 0.28
CPSF1-214ENST00000622776 PITX3O75364 302 aa16.81■□□□□ 0.28
CPSF1-214ENST00000622776 IAPPP10997 89 aa16.81■□□□□ 0.28
CPSF1-214ENST00000622776 GALR1P47211 349 aa16.81■□□□□ 0.28
CPSF1-214ENST00000622776 AMTNQ6UX39 209 aa16.81■□□□□ 0.28
CPSF1-214ENST00000622776 IGF2BP2-AS1Q96M15 143 aa16.81■□□□□ 0.28
CPSF1-214ENST00000622776 TMEM208Q9BTX3 173 aa16.81■□□□□ 0.28
CPSF1-214ENST00000622776 SLC25A32Q9H2D1 315 aa16.81■□□□□ 0.28
CPSF1-214ENST00000622776 PAIP2BQ9ULR5 123 aaKnown RBP16.81■□□□□ 0.28
CPSF1-214ENST00000622776 CFDP00746 253 aaPredicted RBP16.8■□□□□ 0.28
CPSF1-214ENST00000622776 GGNBP1Q5YKI7 109 aa16.8■□□□□ 0.28
CPSF1-214ENST00000622776 GPR141Q7Z602 305 aa16.8■□□□□ 0.28
CPSF1-214ENST00000622776 C17orf77Q96MU5 243 aa16.8■□□□□ 0.28
CPSF1-214ENST00000622776 RSG1Q9BU20 258 aa16.8■□□□□ 0.28
CPSF1-214ENST00000622776 SLC25A22Q9H936 323 aa16.8■□□□□ 0.28
CPSF1-214ENST00000622776 C15orf53Q8NAA6 179 aa16.79■□□□□ 0.28
CPSF1-214ENST00000622776 RSL24D1Q9UHA3 163 aaKnown RBP16.79■□□□□ 0.28
CPSF1-214ENST00000622776 SLC45A2Q9UMX9 530 aa16.79■□□□□ 0.28
CPSF1-214ENST00000622776 TMED3Q9Y3Q3 217 aa16.79■□□□□ 0.28
CPSF1-214ENST00000622776 PIGBOS1A0A0B4J2F0 54 aa16.78■□□□□ 0.28
CPSF1-214ENST00000622776 DUXBA0A1W2PPF3 345 aa16.78■□□□□ 0.28
CPSF1-214ENST00000622776 ZNF98A6NK75 572 aa16.78■□□□□ 0.28
CPSF1-214ENST00000622776 FAM3BP58499 235 aaPredicted RBP16.78■□□□□ 0.28
CPSF1-214ENST00000622776 HSPG2P98160 4391 aa16.77■□□□□ 0.28
CPSF1-214ENST00000622776 ALDH3B2P48448 385 aa16.77■□□□□ 0.28
CPSF1-214ENST00000622776 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.77■□□□□ 0.28
CPSF1-214ENST00000622776 KRTAP4-5Q9BYR2 181 aa16.77■□□□□ 0.28
CPSF1-214ENST00000622776 ZNF705GA8MUZ8 300 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-214ENST00000622776 PRM2P04554 102 aa16.76■□□□□ 0.27
CPSF1-214ENST00000622776 CNN1P51911 297 aaKnown RBP16.76■□□□□ 0.27
CPSF1-214ENST00000622776 OR11H7Q8NGC8 314 aa16.76■□□□□ 0.27
CPSF1-214ENST00000622776 OR4D5Q8NGN0 318 aa16.76■□□□□ 0.27
CPSF1-214ENST00000622776 DYNC2LI1Q8TCX1 351 aa16.76■□□□□ 0.27
CPSF1-214ENST00000622776 CCDC59Q9P031 241 aaKnown RBP16.76■□□□□ 0.27
CPSF1-214ENST00000622776 LYRM9A8MSI8 78 aa16.75■□□□□ 0.27
CPSF1-214ENST00000622776 MED6O75586 246 aa16.75■□□□□ 0.27
CPSF1-214ENST00000622776 DUSP14O95147 198 aaKnown RBP16.75■□□□□ 0.27
CPSF1-214ENST00000622776 SLC25A6P12236 298 aa16.75■□□□□ 0.27
CPSF1-214ENST00000622776 ORM2P19652 201 aa16.75■□□□□ 0.27
CPSF1-214ENST00000622776 SPINK13Q1W4C9 94 aa16.75■□□□□ 0.27
CPSF1-214ENST00000622776 BPIFCQ8NFQ6 507 aa16.75■□□□□ 0.27
CPSF1-214ENST00000622776 OR1B1Q8NGR6 318 aa16.75■□□□□ 0.27
CPSF1-214ENST00000622776 ATG101Q9BSB4 218 aa16.75■□□□□ 0.27
CPSF1-214ENST00000622776 MRPS26Q9BYN8 205 aaKnown RBP16.75■□□□□ 0.27
CPSF1-214ENST00000622776 PRSS46E5RG02 174 aa16.74■□□□□ 0.27
CPSF1-214ENST00000622776 M0R2Z0 102 aa16.74■□□□□ 0.27
CPSF1-214ENST00000622776 CRXO43186 299 aaPredicted RBP16.74■□□□□ 0.27
CPSF1-214ENST00000622776 INSP01308 110 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms