RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 OR1P1Q8NH06 330 aa8.25□□□□□ -1.09
VPS11-208ENST00000621676 OR4A5Q8NH83 315 aa8.25□□□□□ -1.09
VPS11-208ENST00000621676 PIFOQ8TCI5 191 aa8.25□□□□□ -1.09
VPS11-208ENST00000621676 DEFB104AQ8WTQ1 72 aa8.25□□□□□ -1.09
VPS11-208ENST00000621676 CACNG8Q8WXS5 425 aa8.25□□□□□ -1.09
VPS11-208ENST00000621676 C1RLQ9NZP8 487 aa8.25□□□□□ -1.09
VPS11-208ENST00000621676 TCRBV4S1A1TA0A5B7 111 aa8.25□□□□□ -1.09
VPS11-208ENST00000621676 GGTLC3B5MD39 225 aa8.25□□□□□ -1.09
VPS11-208ENST00000621676 EGR2P11161 476 aaPredicted RBP8.25□□□□□ -1.09
VPS11-208ENST00000621676 FUT9Q9Y231 359 aa8.25□□□□□ -1.09
VPS11-208ENST00000621676 PAX1P15863 534 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 Q8TAT8 98 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 OR51M1Q9H341 326 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 FAM181BA6NEQ2 426 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 MBP02144 154 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 IGLC1P0CG04 106 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 C8orf88P0DMB2 117 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 GZMBP10144 247 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 CD33P20138 364 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 TMEM241Q24JQ0 296 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 GOLT1AQ6ZVE7 132 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 OCC1Q8TAD7 63 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 ZNF785A8K8V0 405 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 CXorf1O96002 111 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 CRYGBP07316 175 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 CXCL1P09341 107 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 NBEAP1P0C6P0 100 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 IGHV4-31P0DP07 118 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 ERVFC1-1P60608 527 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 PRR20EP86478 221 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 PRR20CP86479 221 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 PRR20DP86480 221 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 PRR20BP86481 221 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 PRR20AP86496 221 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 EIF4E3Q8N5X7 224 aaKnown RBP8.24□□□□□ -1.09
VPS11-208ENST00000621676 PSMG3-AS1Q96PY0 264 aa8.24□□□□□ -1.09
VPS11-208ENST00000621676 TECRQ9NZ01 308 aaKnown RBP8.24□□□□□ -1.09
VPS11-208ENST00000621676 TRAV41A0A0B4J266 112 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 GGCTO75223 188 aaKnown RBP8.23□□□□□ -1.09
VPS11-208ENST00000621676 STAG3L2P0CL84 134 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 STAG3L3P0CL85 134 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 HTN1P15515 57 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 RPL29P47914 159 aaKnown RBP8.23□□□□□ -1.09
VPS11-208ENST00000621676 KIAA1644Q3SXP7 199 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 PRNTQ86SH4 94 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 I3L2K1 104 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 ADMP35318 185 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 BSXQ3C1V8 233 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 ZNF506Q5JVG8 444 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 UNQ9165/PRO28630Q6UXU0 137 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 ZNF600Q6ZNG1 722 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 SIGLECL1Q8N7X8 197 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 ZNF48Q96MX3 618 aaPredicted RBP8.23□□□□□ -1.09
VPS11-208ENST00000621676 HIGD1AQ9Y241 93 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 BTBD17A6NE02 478 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 ISLRO14498 428 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 MFAP4P55083 255 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 KHDC3LQ587J8 217 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 UQCC3Q6UW78 93 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 NANPQ8TBE9 248 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 RNF125Q96EQ8 232 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 SLC25A2Q9BXI2 301 aa8.23□□□□□ -1.09
VPS11-208ENST00000621676 TRRAPQ9Y4A5 3859 aa8.22□□□□□ -1.09
VPS11-208ENST00000621676 A0A1B0GUS0 222 aa8.22□□□□□ -1.09
VPS11-208ENST00000621676 HELTA6NFD8 242 aa8.22□□□□□ -1.09
VPS11-208ENST00000621676 MRPL54Q6P161 138 aaKnown RBP8.22□□□□□ -1.09
VPS11-208ENST00000621676 TCF24Q7RTU0 167 aa8.22□□□□□ -1.09
VPS11-208ENST00000621676 CENPVQ7Z7K6 275 aaPredicted RBP8.22□□□□□ -1.09
VPS11-208ENST00000621676 C5orf56Q8N8D9 126 aa8.22□□□□□ -1.09
VPS11-208ENST00000621676 MBD3L1Q8WWY6 194 aa8.22□□□□□ -1.09
VPS11-208ENST00000621676 SLC25A39Q9BZJ4 359 aaPredicted RBP8.22□□□□□ -1.09
VPS11-208ENST00000621676 PPIFP30405 207 aaKnown RBP8.22□□□□□ -1.09
VPS11-208ENST00000621676 RPL19P84098 196 aaKnown RBP8.22□□□□□ -1.09
VPS11-208ENST00000621676 TMEM30BQ3MIR4 351 aa8.22□□□□□ -1.09
VPS11-208ENST00000621676 OR1L4Q8NGR5 311 aa8.22□□□□□ -1.09
VPS11-208ENST00000621676 Q8WTZ3 238 aa8.22□□□□□ -1.09
VPS11-208ENST00000621676 IMMP2LQ96T52 175 aa8.22□□□□□ -1.09
VPS11-208ENST00000621676 TIMM9Q9Y5J7 89 aa8.22□□□□□ -1.09
VPS11-208ENST00000621676 H7BYZ3 331 aa8.21□□□□□ -1.09
VPS11-208ENST00000621676 CORTO00230 105 aa8.21□□□□□ -1.09
VPS11-208ENST00000621676 RPLP1P05386 114 aaKnown RBP8.21□□□□□ -1.09
VPS11-208ENST00000621676 RPL23P62829 140 aaKnown RBP8.21□□□□□ -1.09
VPS11-208ENST00000621676 TM4SF20Q53R12 229 aa8.21□□□□□ -1.09
VPS11-208ENST00000621676 CENPWQ5EE01 88 aa8.21□□□□□ -1.09
VPS11-208ENST00000621676 MINOS1Q5TGZ0 78 aa8.21□□□□□ -1.09
VPS11-208ENST00000621676 CMTM2Q8TAZ6 248 aa8.21□□□□□ -1.09
VPS11-208ENST00000621676 MINOS1-NBL1R4GNA1 71 aa8.21□□□□□ -1.09
VPS11-208ENST00000621676 IGKV2-40A0A087WW87 121 aaPredicted RBP8.21□□□□□ -1.1
VPS11-208ENST00000621676 ZNF98A6NK75 572 aa8.21□□□□□ -1.1
VPS11-208ENST00000621676 FAM90A9PA6NNJ1 464 aa8.21□□□□□ -1.1
VPS11-208ENST00000621676 VWC2LB2RUY7 222 aa8.21□□□□□ -1.1
VPS11-208ENST00000621676 CLN5O75503 358 aa8.21□□□□□ -1.1
VPS11-208ENST00000621676 IGKV2D-40P01614 121 aaPredicted RBP8.21□□□□□ -1.1
VPS11-208ENST00000621676 TRGC2P03986 189 aa8.21□□□□□ -1.1
VPS11-208ENST00000621676 CAMPP49913 170 aa8.21□□□□□ -1.1
VPS11-208ENST00000621676 BPIFB3P59826 476 aa8.21□□□□□ -1.1
VPS11-208ENST00000621676 FLI1Q01543 452 aaPredicted RBP8.21□□□□□ -1.1
VPS11-208ENST00000621676 F6UZH7 168 aa8.21□□□□□ -1.1
VPS11-208ENST00000621676 CTSGP08311 255 aa8.21□□□□□ -1.1
VPS11-208ENST00000621676 LYPD6BQ8NI32 183 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms