RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 ORM2P19652 201 aa13.61□□□□□ -0.23
LITAF-220ENST00000620789 AP2S1P53680 142 aaPredicted RBP13.61□□□□□ -0.23
LITAF-220ENST00000620789 EWSR1Q01844 656 aaKnown RBP eCLIP13.61□□□□□ -0.23
LITAF-220ENST00000620789 LINC00322Q6ZN03 302 aaPredicted RBP13.61□□□□□ -0.23
LITAF-220ENST00000620789 WFDC3Q8IUB2 231 aa13.61□□□□□ -0.23
LITAF-220ENST00000620789 STPG3Q8N7X2 389 aa13.61□□□□□ -0.23
LITAF-220ENST00000620789 STXBP6Q8NFX7 210 aa13.61□□□□□ -0.23
LITAF-220ENST00000620789 OR11H7Q8NGC8 314 aa13.61□□□□□ -0.23
LITAF-220ENST00000620789 PPP1R14BQ96C90 147 aa13.61□□□□□ -0.23
LITAF-220ENST00000620789 RNF126Q9BV68 326 aa13.61□□□□□ -0.23
LITAF-220ENST00000620789 TMEM147Q9BVK8 224 aa13.61□□□□□ -0.23
LITAF-220ENST00000620789 AGPAT2O15120 278 aa13.6□□□□□ -0.23
LITAF-220ENST00000620789 LINC00869P0C866 280 aa13.6□□□□□ -0.23
LITAF-220ENST00000620789 CMC4P56277 68 aaPredicted RBP13.6□□□□□ -0.23
LITAF-220ENST00000620789 ATP6V1FQ16864 119 aa13.6□□□□□ -0.23
LITAF-220ENST00000620789 C1orf194Q5T5A4 169 aa13.6□□□□□ -0.23
LITAF-220ENST00000620789 SIGLEC15Q6ZMC9 328 aa13.6□□□□□ -0.23
LITAF-220ENST00000620789 ZNF546Q86UE3 836 aa13.6□□□□□ -0.23
LITAF-220ENST00000620789 OR1B1Q8NGR6 318 aa13.6□□□□□ -0.23
LITAF-220ENST00000620789 CITED4Q96RK1 184 aa13.6□□□□□ -0.23
LITAF-220ENST00000620789 MGST2Q99735 147 aa13.6□□□□□ -0.23
LITAF-220ENST00000620789 WDR83OSQ9Y284 106 aa13.6□□□□□ -0.23
LITAF-220ENST00000620789 RBMY1BA6NDE4 496 aaKnown RBP13.59□□□□□ -0.23
LITAF-220ENST00000620789 RBMY1EA6NEQ0 496 aaKnown RBP13.59□□□□□ -0.23
LITAF-220ENST00000620789 RBMY1DP0C7P1 496 aaKnown RBP13.59□□□□□ -0.23
LITAF-220ENST00000620789 PLP1P60201 277 aa13.59□□□□□ -0.23
LITAF-220ENST00000620789 NHLH2Q02577 135 aa13.59□□□□□ -0.23
LITAF-220ENST00000620789 BAXQ07812 192 aa13.59□□□□□ -0.23
LITAF-220ENST00000620789 DCANP1Q8TF63 244 aa13.59□□□□□ -0.23
LITAF-220ENST00000620789 MAP6D1Q9H9H5 199 aa13.59□□□□□ -0.23
LITAF-220ENST00000620789 DOK5Q9P104 306 aa13.59□□□□□ -0.23
LITAF-220ENST00000620789 FBXL17Q9UF56 701 aa13.59□□□□□ -0.23
LITAF-220ENST00000620789 UBE2L5PA0A1B0GUS4 154 aa13.58□□□□□ -0.24
LITAF-220ENST00000620789 K7EQG2 157 aa13.58□□□□□ -0.24
LITAF-220ENST00000620789 S100A7P31151 101 aa13.58□□□□□ -0.24
LITAF-220ENST00000620789 CAMLGP49069 296 aa13.58□□□□□ -0.24
LITAF-220ENST00000620789 RAB31Q13636 194 aa13.58□□□□□ -0.24
LITAF-220ENST00000620789 HAGHQ16775 308 aa13.58□□□□□ -0.24
LITAF-220ENST00000620789 FAM24BQ8N5W8 94 aa13.58□□□□□ -0.24
LITAF-220ENST00000620789 OR5C1Q8NGR4 320 aa13.58□□□□□ -0.24
LITAF-220ENST00000620789 NRN1Q9NPD7 142 aa13.58□□□□□ -0.24
LITAF-220ENST00000620789 MBD2Q9UBB5 411 aa13.58□□□□□ -0.24
LITAF-220ENST00000620789 HYPMO75409 117 aa13.57□□□□□ -0.24
LITAF-220ENST00000620789 RAP2BP61225 183 aa13.57□□□□□ -0.24
LITAF-220ENST00000620789 APRG1Q8IVJ8 170 aa13.57□□□□□ -0.24
LITAF-220ENST00000620789 ARL6Q9H0F7 186 aa13.57□□□□□ -0.24
LITAF-220ENST00000620789 HIGD1AQ9Y241 93 aa13.57□□□□□ -0.24
LITAF-220ENST00000620789 ZNF98A6NK75 572 aa13.56□□□□□ -0.24
LITAF-220ENST00000620789 H3BRN7 92 aa13.56□□□□□ -0.24
LITAF-220ENST00000620789 OR5G3P0C626 314 aa13.56□□□□□ -0.24
LITAF-220ENST00000620789 LYL1P12980 280 aa13.56□□□□□ -0.24
LITAF-220ENST00000620789 PXDC1Q5TGL8 231 aa13.56□□□□□ -0.24
LITAF-220ENST00000620789 OR8I2Q8N0Y5 310 aa13.56□□□□□ -0.24
LITAF-220ENST00000620789 ASB13Q8WXK3 278 aa13.56□□□□□ -0.24
LITAF-220ENST00000620789 TM2D3Q9BRN9 247 aa13.56□□□□□ -0.24
LITAF-220ENST00000620789 GGTLC1Q9BX51 225 aa13.56□□□□□ -0.24
LITAF-220ENST00000620789 SLC25A39Q9BZJ4 359 aaPredicted RBP13.56□□□□□ -0.24
LITAF-220ENST00000620789 SLC25A22Q9H936 323 aa13.56□□□□□ -0.24
LITAF-220ENST00000620789 LOC102724200A0A096LPH7 203 aaPredicted RBP13.55□□□□□ -0.24
LITAF-220ENST00000620789 GIPP09681 153 aaPredicted RBP13.55□□□□□ -0.24
LITAF-220ENST00000620789 FGF7P21781 194 aa13.55□□□□□ -0.24
LITAF-220ENST00000620789 RPL12P30050 165 aaKnown RBP13.55□□□□□ -0.24
LITAF-220ENST00000620789 DEFB131AP59861 70 aa13.55□□□□□ -0.24
LITAF-220ENST00000620789 ZNF124Q15973 351 aa13.55□□□□□ -0.24
LITAF-220ENST00000620789 S100A7AQ86SG5 101 aa13.55□□□□□ -0.24
LITAF-220ENST00000620789 THAP6Q8TBB0 222 aa13.55□□□□□ -0.24
LITAF-220ENST00000620789 SHANK2-AS3Q9BTD1 123 aa13.55□□□□□ -0.24
LITAF-220ENST00000620789 SLC25A32Q9H2D1 315 aa13.55□□□□□ -0.24
LITAF-220ENST00000620789 ZMAT4Q9H898 229 aa13.55□□□□□ -0.24
LITAF-220ENST00000620789 MPDU1O75352 247 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 ZNF688P0C7X2 276 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 PRR20EP86478 221 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 PRR20CP86479 221 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 PRR20DP86480 221 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 PRR20BP86481 221 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 PRR20AP86496 221 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 CLINT1Q14677 625 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 OPCMLQ14982 345 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 MIC13Q5XKP0 118 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 PATE2Q6UY27 113 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 CHAC2Q8WUX2 184 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 GPR82Q96P67 336 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 UHRF2Q96PU4 802 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 SCRT1Q9BWW7 348 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 ARV1Q9H2C2 271 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 HSPB11Q9Y547 144 aa13.54□□□□□ -0.24
LITAF-220ENST00000620789 HUWE1Q7Z6Z7 4374 aaKnown RBP13.53□□□□□ -0.24
LITAF-220ENST00000620789 GALR1P47211 349 aa13.53□□□□□ -0.24
LITAF-220ENST00000620789 RPL29P47914 159 aaKnown RBP13.53□□□□□ -0.24
LITAF-220ENST00000620789 FGL1Q08830 312 aa13.53□□□□□ -0.24
LITAF-220ENST00000620789 LEMD1Q68G75 181 aa13.53□□□□□ -0.24
LITAF-220ENST00000620789 SPATA25Q9BR10 227 aa13.53□□□□□ -0.24
LITAF-220ENST00000620789 SEPSECSQ9HD40 501 aaKnown RBP13.53□□□□□ -0.24
LITAF-220ENST00000620789 U3KQK5 164 aa13.53□□□□□ -0.24
LITAF-220ENST00000620789 ELOA3CA0A087WX78 387 aaPredicted RBP13.52□□□□□ -0.25
LITAF-220ENST00000620789 COX7A2P2O60397 106 aa13.52□□□□□ -0.25
LITAF-220ENST00000620789 Q6ZRG5 221 aa13.52□□□□□ -0.25
LITAF-220ENST00000620789 ATP5SQ99766 215 aa13.52□□□□□ -0.25
LITAF-220ENST00000620789 NPCDR1Q9BY65 106 aa13.52□□□□□ -0.25
LITAF-220ENST00000620789 NBEAL2Q6ZNJ1 2754 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms