RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 H0YIZ8 118 aa6.09□□□□□ -1.43
NEK3-209ENST00000618856 SOCS3O14543 225 aa6.09□□□□□ -1.43
NEK3-209ENST00000618856 SULT1A1P50225 295 aa6.09□□□□□ -1.43
NEK3-209ENST00000618856 SELENOTP62341 195 aa6.09□□□□□ -1.43
NEK3-209ENST00000618856 LINC01559Q495D7 138 aa6.09□□□□□ -1.43
NEK3-209ENST00000618856 TEPPQ6URK8 271 aa6.09□□□□□ -1.43
NEK3-209ENST00000618856 CYP2G1PQ6ZSU1 146 aa6.09□□□□□ -1.43
NEK3-209ENST00000618856 GBGT1Q8N5D6 347 aa6.09□□□□□ -1.43
NEK3-209ENST00000618856 TMEM252Q8N6L7 170 aa6.09□□□□□ -1.43
NEK3-209ENST00000618856 NARS2Q96I59 477 aaKnown RBP6.09□□□□□ -1.43
NEK3-209ENST00000618856 ZMAT4Q9H898 229 aa6.09□□□□□ -1.43
NEK3-209ENST00000618856 UBQLN2Q9UHD9 624 aa6.09□□□□□ -1.43
NEK3-209ENST00000618856 PAIP2BQ9ULR5 123 aaKnown RBP6.09□□□□□ -1.43
NEK3-209ENST00000618856 LSM5Q9Y4Y9 91 aaKnown RBP6.09□□□□□ -1.43
NEK3-209ENST00000618856 IGSF23A1L1A6 192 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 FAM24AA6NFZ4 105 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 UBE2CO00762 179 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 GOSR2O14653 212 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 SIX6O95475 246 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 PVALBP20472 110 aaPredicted RBP6.08□□□□□ -1.44
NEK3-209ENST00000618856 GATA2P23769 480 aaPredicted RBP6.08□□□□□ -1.44
NEK3-209ENST00000618856 TFPI2P48307 235 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 SMCPP49901 116 aaPredicted RBP6.08□□□□□ -1.44
NEK3-209ENST00000618856 CYCSP99999 105 aaKnown RBP6.08□□□□□ -1.44
NEK3-209ENST00000618856 AKR1C1Q04828 323 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 OR2F1Q13607 317 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 ZNF124Q15973 351 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 PXDC1Q5TGL8 231 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 PATE2Q6UY27 113 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 SIGLEC15Q6ZMC9 328 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 Q6ZWC4 215 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 WFDC3Q8IUB2 231 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 APRG1Q8IVJ8 170 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 BPIFCQ8NFQ6 507 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 RNF126Q9BV68 326 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 NRN1Q9NPD7 142 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 FBXL17Q9UF56 701 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 PFDN2Q9UHV9 154 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 WDR83OSQ9Y284 106 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 TP53TG1Q9Y2A0 90 aa6.08□□□□□ -1.44
NEK3-209ENST00000618856 IGKV3-7A0A075B6H7 116 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 ZNF98A6NK75 572 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 E5RGE8 158 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 H3BRN7 92 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 L7N2F9 121 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 CST7O76096 145 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 LINC00869P0C866 280 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 LYL1P12980 280 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 S100A11P31949 105 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 CAV2P51636 162 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 APOC4P55056 127 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 LYZP61626 148 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 RRAS2P62070 204 aaPredicted RBP6.07□□□□□ -1.44
NEK3-209ENST00000618856 VAMP2P63027 116 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 SLC38A11Q08AI6 406 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 ATP6V1FQ16864 119 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 MGST2Q99735 147 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 OVOL2Q9BRP0 275 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 SHANK2-AS3Q9BTD1 123 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 PBDC1Q9BVG4 233 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 OR5AC2Q9NZP5 309 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 MGAT4CQ9UBM8 478 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 ALG5Q9Y673 324 aa6.07□□□□□ -1.44
NEK3-209ENST00000618856 DNASE2O00115 360 aaPredicted RBP6.06□□□□□ -1.44
NEK3-209ENST00000618856 AGPAT2O15120 278 aa6.06□□□□□ -1.44
NEK3-209ENST00000618856 MRPS12O15235 138 aaKnown RBP6.06□□□□□ -1.44
NEK3-209ENST00000618856 MPC2O95563 127 aa6.06□□□□□ -1.44
NEK3-209ENST00000618856 GIG44P09565 113 aaPredicted RBP6.06□□□□□ -1.44
NEK3-209ENST00000618856 ORM2P19652 201 aa6.06□□□□□ -1.44
NEK3-209ENST00000618856 DEFB131AP59861 70 aa6.06□□□□□ -1.44
NEK3-209ENST00000618856 S100A10P60903 97 aa6.06□□□□□ -1.44
NEK3-209ENST00000618856 RPL11P62913 178 aaKnown RBP6.06□□□□□ -1.44
NEK3-209ENST00000618856 OXA1LQ15070 435 aa6.06□□□□□ -1.44
NEK3-209ENST00000618856 C4orf48Q5BLP8 95 aa6.06□□□□□ -1.44
NEK3-209ENST00000618856 SAMD13Q5VXD3 122 aa6.06□□□□□ -1.44
NEK3-209ENST00000618856 TRPT1Q86TN4 253 aaKnown RBP6.06□□□□□ -1.44
NEK3-209ENST00000618856 ZNF546Q86UE3 836 aa6.06□□□□□ -1.44
NEK3-209ENST00000618856 STXBP6Q8NFX7 210 aa6.06□□□□□ -1.44
NEK3-209ENST00000618856 PPP1R1CQ8WVI7 109 aa6.06□□□□□ -1.44
NEK3-209ENST00000618856 RNF183Q96D59 192 aa6.06□□□□□ -1.44
NEK3-209ENST00000618856 GPR82Q96P67 336 aa6.06□□□□□ -1.44
NEK3-209ENST00000618856 SLC25A39Q9BZJ4 359 aaPredicted RBP6.06□□□□□ -1.44
NEK3-209ENST00000618856 SLC25A32Q9H2D1 315 aa6.06□□□□□ -1.44
NEK3-209ENST00000618856 UQCC1Q9NVA1 299 aa6.06□□□□□ -1.44
NEK3-209ENST00000618856 SMCO3A2RU48 225 aa6.05□□□□□ -1.44
NEK3-209ENST00000618856 SSNA1O43805 119 aa6.05□□□□□ -1.44
NEK3-209ENST00000618856 HYPMO75409 117 aa6.05□□□□□ -1.44
NEK3-209ENST00000618856 RLN2P04090 185 aa6.05□□□□□ -1.44
NEK3-209ENST00000618856 ZNF688P0C7X2 276 aa6.05□□□□□ -1.44
NEK3-209ENST00000618856 CXCL3P19876 107 aa6.05□□□□□ -1.44
NEK3-209ENST00000618856 S100A7P31151 101 aa6.05□□□□□ -1.44
NEK3-209ENST00000618856 RPL29P47914 159 aaKnown RBP6.05□□□□□ -1.44
NEK3-209ENST00000618856 PSMB3P49720 205 aa6.05□□□□□ -1.44
NEK3-209ENST00000618856 BCAP31P51572 246 aa6.05□□□□□ -1.44
NEK3-209ENST00000618856 HBG1P69891 147 aa6.05□□□□□ -1.44
NEK3-209ENST00000618856 HBG2P69892 147 aa6.05□□□□□ -1.44
NEK3-209ENST00000618856 EWSR1Q01844 656 aaKnown RBP eCLIP6.05□□□□□ -1.44
NEK3-209ENST00000618856 NHLH2Q02577 135 aa6.05□□□□□ -1.44
NEK3-209ENST00000618856 BAXQ07812 192 aa6.05□□□□□ -1.44
NEK3-209ENST00000618856 LEMD1Q68G75 181 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms