RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 GATA2P23769 480 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-228ENST00000618469 S100A10P60903 97 aa11.77□□□□□ -0.53
BRCA1-228ENST00000618469 DLK1P80370 383 aa11.77□□□□□ -0.53
BRCA1-228ENST00000618469 PSMG4Q5JS54 123 aa11.77□□□□□ -0.53
BRCA1-228ENST00000618469 GSG1LQ6UXU4 331 aa11.77□□□□□ -0.53
BRCA1-228ENST00000618469 TMEM144Q7Z5S9 345 aa11.77□□□□□ -0.53
BRCA1-228ENST00000618469 NRARPQ7Z6K4 114 aa11.77□□□□□ -0.53
BRCA1-228ENST00000618469 BPIFCQ8NFQ6 507 aa11.77□□□□□ -0.53
BRCA1-228ENST00000618469 OR10P1Q8NGE3 313 aa11.77□□□□□ -0.53
BRCA1-228ENST00000618469 C2orf50Q96LR7 162 aa11.77□□□□□ -0.53
BRCA1-228ENST00000618469 MGAT4CQ9UBM8 478 aa11.77□□□□□ -0.53
BRCA1-228ENST00000618469 SPRY2O43597 315 aa11.76□□□□□ -0.53
BRCA1-228ENST00000618469 CFDP00746 253 aaPredicted RBP11.76□□□□□ -0.53
BRCA1-228ENST00000618469 DEFA1P59665 94 aa11.76□□□□□ -0.53
BRCA1-228ENST00000618469 DEFA3P59666 94 aa11.76□□□□□ -0.53
BRCA1-228ENST00000618469 STHQ8IWL8 128 aa11.76□□□□□ -0.53
BRCA1-228ENST00000618469 CSTL1Q9H114 145 aa11.76□□□□□ -0.53
BRCA1-228ENST00000618469 GPN1Q9HCN4 374 aaPredicted RBP11.76□□□□□ -0.53
BRCA1-228ENST00000618469 TP53TG1Q9Y2A0 90 aa11.76□□□□□ -0.53
BRCA1-228ENST00000618469 KNCNA6PVL3 124 aa11.75□□□□□ -0.53
BRCA1-228ENST00000618469 CA1P00915 261 aaPredicted RBP11.75□□□□□ -0.53
BRCA1-228ENST00000618469 ORM2P19652 201 aa11.75□□□□□ -0.53
BRCA1-228ENST00000618469 BCAP31P51572 246 aa11.75□□□□□ -0.53
BRCA1-228ENST00000618469 CAV2P51636 162 aa11.75□□□□□ -0.53
BRCA1-228ENST00000618469 SNRPD3P62318 126 aaKnown RBP11.75□□□□□ -0.53
BRCA1-228ENST00000618469 TMEM182Q6ZP80 229 aaPredicted RBP11.75□□□□□ -0.53
BRCA1-228ENST00000618469 CYP2G1PQ6ZSU1 146 aa11.75□□□□□ -0.53
BRCA1-228ENST00000618469 OR1B1Q8NGR6 318 aa11.75□□□□□ -0.53
BRCA1-228ENST00000618469 DOK5Q9P104 306 aa11.75□□□□□ -0.53
BRCA1-228ENST00000618469 FBXL17Q9UF56 701 aa11.75□□□□□ -0.53
BRCA1-228ENST00000618469 INMT-MINDY4F8WBC2 141 aa11.74□□□□□ -0.53
BRCA1-228ENST00000618469 JTBO76095 146 aa11.74□□□□□ -0.53
BRCA1-228ENST00000618469 ARL16Q0P5N6 197 aa11.74□□□□□ -0.53
BRCA1-228ENST00000618469 ACTL10Q5JWF8 245 aa11.74□□□□□ -0.53
BRCA1-228ENST00000618469 C1orf194Q5T5A4 169 aa11.74□□□□□ -0.53
BRCA1-228ENST00000618469 OR8I2Q8N0Y5 310 aa11.74□□□□□ -0.53
BRCA1-228ENST00000618469 RNF183Q96D59 192 aa11.74□□□□□ -0.53
BRCA1-228ENST00000618469 TMEM147Q9BVK8 224 aa11.74□□□□□ -0.53
BRCA1-228ENST00000618469 SLC25A22Q9H936 323 aa11.74□□□□□ -0.53
BRCA1-228ENST00000618469 FNDC10F2Z333 226 aa11.73□□□□□ -0.53
BRCA1-228ENST00000618469 GOSR2O14653 212 aa11.73□□□□□ -0.53
BRCA1-228ENST00000618469 PRAF2O60831 178 aa11.73□□□□□ -0.53
BRCA1-228ENST00000618469 LINC00869P0C866 280 aa11.73□□□□□ -0.53
BRCA1-228ENST00000618469 PVALBP20472 110 aaPredicted RBP11.73□□□□□ -0.53
BRCA1-228ENST00000618469 SLC38A11Q08AI6 406 aa11.73□□□□□ -0.53
BRCA1-228ENST00000618469 RAB32Q13637 225 aa11.73□□□□□ -0.53
BRCA1-228ENST00000618469 TRPT1Q86TN4 253 aaKnown RBP11.73□□□□□ -0.53
BRCA1-228ENST00000618469 SLC25A32Q9H2D1 315 aa11.73□□□□□ -0.53
BRCA1-228ENST00000618469 SLC45A2Q9UMX9 530 aa11.73□□□□□ -0.53
BRCA1-228ENST00000618469 A0A0J9YWU9 116 aa11.72□□□□□ -0.53
BRCA1-228ENST00000618469 CST7O76096 145 aa11.72□□□□□ -0.53
BRCA1-228ENST00000618469 TEPPQ6URK8 271 aa11.72□□□□□ -0.53
BRCA1-228ENST00000618469 SCRT1Q9BWW7 348 aa11.72□□□□□ -0.53
BRCA1-228ENST00000618469 C11orf1Q9H5F2 150 aa11.72□□□□□ -0.53
BRCA1-228ENST00000618469 NPVFQ9HCQ7 196 aa11.72□□□□□ -0.53
BRCA1-228ENST00000618469 FAM24AA6NFZ4 105 aa11.71□□□□□ -0.53
BRCA1-228ENST00000618469 ZNF98A6NK75 572 aa11.71□□□□□ -0.53
BRCA1-228ENST00000618469 SIX6O95475 246 aa11.71□□□□□ -0.53
BRCA1-228ENST00000618469 S100A7P31151 101 aa11.71□□□□□ -0.53
BRCA1-228ENST00000618469 GALR1P47211 349 aa11.71□□□□□ -0.53
BRCA1-228ENST00000618469 SELENOTP62341 195 aa11.71□□□□□ -0.53
BRCA1-228ENST00000618469 TMEM217Q8N7C4 229 aa11.71□□□□□ -0.53
BRCA1-228ENST00000618469 GGACTQ9BVM4 153 aa11.71□□□□□ -0.53
BRCA1-228ENST00000618469 SEPSECSQ9HD40 501 aaKnown RBP11.71□□□□□ -0.53
BRCA1-228ENST00000618469 HIGD1AQ9Y241 93 aa11.71□□□□□ -0.53
BRCA1-228ENST00000618469 AGRNO00468 2067 aa11.71□□□□□ -0.54
BRCA1-228ENST00000618469 H3BRN7 92 aa11.7□□□□□ -0.54
BRCA1-228ENST00000618469 SOCS3O14543 225 aa11.7□□□□□ -0.54
BRCA1-228ENST00000618469 OR5G3P0C626 314 aa11.7□□□□□ -0.54
BRCA1-228ENST00000618469 SPP1P10451 314 aa11.7□□□□□ -0.54
BRCA1-228ENST00000618469 C4BPBP20851 252 aa11.7□□□□□ -0.54
BRCA1-228ENST00000618469 PSMB3P49720 205 aa11.7□□□□□ -0.54
BRCA1-228ENST00000618469 RAP2BP61225 183 aa11.7□□□□□ -0.54
BRCA1-228ENST00000618469 IL15RAQ13261 267 aa11.7□□□□□ -0.54
BRCA1-228ENST00000618469 ZNF546Q86UE3 836 aa11.7□□□□□ -0.54
BRCA1-228ENST00000618469 STX12Q86Y82 276 aa11.7□□□□□ -0.54
BRCA1-228ENST00000618469 IL17DQ8TAD2 202 aa11.7□□□□□ -0.54
BRCA1-228ENST00000618469 GATAD1Q8WUU5 269 aa11.7□□□□□ -0.54
BRCA1-228ENST00000618469 LINC00052Q96N35 136 aa11.7□□□□□ -0.54
BRCA1-228ENST00000618469 MARVELD1Q9BSK0 173 aa11.7□□□□□ -0.54
BRCA1-228ENST00000618469 LYRM2Q9NU23 88 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-228ENST00000618469 IGSF23A1L1A6 192 aa11.69□□□□□ -0.54
BRCA1-228ENST00000618469 AGPAT2O15120 278 aa11.69□□□□□ -0.54
BRCA1-228ENST00000618469 HYPMO75409 117 aa11.69□□□□□ -0.54
BRCA1-228ENST00000618469 DEDDO75618 318 aa11.69□□□□□ -0.54
BRCA1-228ENST00000618469 ID1P41134 155 aa11.69□□□□□ -0.54
BRCA1-228ENST00000618469 LRRC37A5PQ49AS3 106 aa11.69□□□□□ -0.54
BRCA1-228ENST00000618469 MORN3Q6PF18 240 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-228ENST00000618469 UHRF2Q96PU4 802 aa11.69□□□□□ -0.54
BRCA1-228ENST00000618469 SLC25A39Q9BZJ4 359 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-228ENST00000618469 ARL6Q9H0F7 186 aa11.69□□□□□ -0.54
BRCA1-228ENST00000618469 ALMS1Q8TCU4 4167 aa11.68□□□□□ -0.54
BRCA1-228ENST00000618469 UBE2L5PA0A1B0GUS4 154 aa11.68□□□□□ -0.54
BRCA1-228ENST00000618469 MEOX2P50222 304 aa11.68□□□□□ -0.54
BRCA1-228ENST00000618469 SULT1A1P50225 295 aa11.68□□□□□ -0.54
BRCA1-228ENST00000618469 DEFB1P60022 68 aa11.68□□□□□ -0.54
BRCA1-228ENST00000618469 PLP1P60201 277 aa11.68□□□□□ -0.54
BRCA1-228ENST00000618469 TMEM252Q8N6L7 170 aa11.68□□□□□ -0.54
BRCA1-228ENST00000618469 OR11H2Q8NH07 326 aa11.68□□□□□ -0.54
BRCA1-228ENST00000618469 MGST2Q99735 147 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms