RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 CXCL2P19875 107 aa11.26□□□□□ -0.61
UBXN1-218ENST00000616865 C4BPBP20851 252 aa11.26□□□□□ -0.61
UBXN1-218ENST00000616865 TMEM190Q8WZ59 177 aa11.26□□□□□ -0.61
UBXN1-218ENST00000616865 PPP1R14BQ96C90 147 aa11.26□□□□□ -0.61
UBXN1-218ENST00000616865 CITED4Q96RK1 184 aa11.26□□□□□ -0.61
UBXN1-218ENST00000616865 PFDN2Q9UHV9 154 aa11.26□□□□□ -0.61
UBXN1-218ENST00000616865 BCL2L11O43521 198 aa11.25□□□□□ -0.61
UBXN1-218ENST00000616865 JTBO76095 146 aa11.25□□□□□ -0.61
UBXN1-218ENST00000616865 LINC00869P0C866 280 aa11.25□□□□□ -0.61
UBXN1-218ENST00000616865 GATA2P23769 480 aaPredicted RBP11.25□□□□□ -0.61
UBXN1-218ENST00000616865 S100A7P31151 101 aa11.25□□□□□ -0.61
UBXN1-218ENST00000616865 UNQ9165/PRO28630Q6UXU0 137 aa11.25□□□□□ -0.61
UBXN1-218ENST00000616865 Q6ZRG5 221 aa11.25□□□□□ -0.61
UBXN1-218ENST00000616865 OR9G4Q8NGQ1 327 aa11.25□□□□□ -0.61
UBXN1-218ENST00000616865 RNF125Q96EQ8 232 aa11.25□□□□□ -0.61
UBXN1-218ENST00000616865 METTL26Q96S19 204 aa11.25□□□□□ -0.61
UBXN1-218ENST00000616865 GGTLC1Q9BX51 225 aa11.25□□□□□ -0.61
UBXN1-218ENST00000616865 NPCDR1Q9BY65 106 aa11.25□□□□□ -0.61
UBXN1-218ENST00000616865 PARD6GQ9BYG4 376 aaPredicted RBP11.25□□□□□ -0.61
UBXN1-218ENST00000616865 DAZ1Q9NQZ3 744 aaKnown RBP11.25□□□□□ -0.61
UBXN1-218ENST00000616865 RABAC1Q9UI14 185 aa11.25□□□□□ -0.61
UBXN1-218ENST00000616865 SLC45A2Q9UMX9 530 aa11.25□□□□□ -0.61
UBXN1-218ENST00000616865 ORM2P19652 201 aa11.24□□□□□ -0.61
UBXN1-218ENST00000616865 NPPCP23582 126 aa11.24□□□□□ -0.61
UBXN1-218ENST00000616865 BMI1P35226 326 aa11.24□□□□□ -0.61
UBXN1-218ENST00000616865 ELLP55199 621 aaPredicted RBP11.24□□□□□ -0.61
UBXN1-218ENST00000616865 EIF5AP63241 154 aaKnown RBP11.24□□□□□ -0.61
UBXN1-218ENST00000616865 OPCMLQ14982 345 aa11.24□□□□□ -0.61
UBXN1-218ENST00000616865 TM4SF20Q53R12 229 aa11.24□□□□□ -0.61
UBXN1-218ENST00000616865 MIC13Q5XKP0 118 aa11.24□□□□□ -0.61
UBXN1-218ENST00000616865 RPL7L1Q6DKI1 246 aaKnown RBP11.24□□□□□ -0.61
UBXN1-218ENST00000616865 S100A7AQ86SG5 101 aa11.24□□□□□ -0.61
UBXN1-218ENST00000616865 HSD17B11Q8NBQ5 300 aa11.24□□□□□ -0.61
UBXN1-218ENST00000616865 OR1B1Q8NGR6 318 aa11.24□□□□□ -0.61
UBXN1-218ENST00000616865 TM2D3Q9BRN9 247 aa11.24□□□□□ -0.61
UBXN1-218ENST00000616865 ZNF471Q9BX82 626 aaPredicted RBP11.24□□□□□ -0.61
UBXN1-218ENST00000616865 ZFAND3Q9H8U3 227 aa11.24□□□□□ -0.61
UBXN1-218ENST00000616865 PXMP4Q9Y6I8 212 aa11.24□□□□□ -0.61
UBXN1-218ENST00000616865 K7EMT4 169 aa11.23□□□□□ -0.61
UBXN1-218ENST00000616865 COX7A2P2O60397 106 aa11.23□□□□□ -0.61
UBXN1-218ENST00000616865 HYPMO75409 117 aa11.23□□□□□ -0.61
UBXN1-218ENST00000616865 OR5G3P0C626 314 aa11.23□□□□□ -0.61
UBXN1-218ENST00000616865 RPL29P47914 159 aaKnown RBP11.23□□□□□ -0.61
UBXN1-218ENST00000616865 NKX2-5P52952 324 aaPredicted RBP11.23□□□□□ -0.61
UBXN1-218ENST00000616865 B2MP61769 119 aa11.23□□□□□ -0.61
UBXN1-218ENST00000616865 LGALSLQ3ZCW2 172 aaPredicted RBP11.23□□□□□ -0.61
UBXN1-218ENST00000616865 PXDC1Q5TGL8 231 aa11.23□□□□□ -0.61
UBXN1-218ENST00000616865 ZFAND6Q6FIF0 208 aa11.23□□□□□ -0.61
UBXN1-218ENST00000616865 STPG3Q8N7X2 389 aa11.23□□□□□ -0.61
UBXN1-218ENST00000616865 DYNLRB2Q8TF09 96 aa11.23□□□□□ -0.61
UBXN1-218ENST00000616865 MARC2Q969Z3 335 aa11.23□□□□□ -0.61
UBXN1-218ENST00000616865 RSG1Q9BU20 258 aa11.23□□□□□ -0.61
UBXN1-218ENST00000616865 TMEM231Q9H6L2 316 aa11.23□□□□□ -0.61
UBXN1-218ENST00000616865 SLC39A9Q9NUM3 307 aa11.23□□□□□ -0.61
UBXN1-218ENST00000616865 DOK5Q9P104 306 aa11.23□□□□□ -0.61
UBXN1-218ENST00000616865 C2orf70A6NJV1 201 aa11.22□□□□□ -0.61
UBXN1-218ENST00000616865 A8MWP6 167 aa11.22□□□□□ -0.61
UBXN1-218ENST00000616865 HNRNPCP07910 306 aaKnown RBP eCLIP11.22□□□□□ -0.61
UBXN1-218ENST00000616865 TMEM182Q6ZP80 229 aaPredicted RBP11.22□□□□□ -0.61
UBXN1-218ENST00000616865 OR1L4Q8NGR5 311 aa11.22□□□□□ -0.61
UBXN1-218ENST00000616865 GNPNAT1Q96EK6 184 aaPredicted RBP11.22□□□□□ -0.61
UBXN1-218ENST00000616865 GRAMD2BQ96HH9 432 aa11.22□□□□□ -0.61
UBXN1-218ENST00000616865 EDA2RQ9HAV5 297 aa11.22□□□□□ -0.61
UBXN1-218ENST00000616865 HIGD1AQ9Y241 93 aa11.22□□□□□ -0.61
UBXN1-218ENST00000616865 IGHV3-49A0A0A0MS15 119 aa11.21□□□□□ -0.61
UBXN1-218ENST00000616865 A0A1W2PS18 150 aa11.21□□□□□ -0.61
UBXN1-218ENST00000616865 FOLR2P14207 255 aa11.21□□□□□ -0.61
UBXN1-218ENST00000616865 USF2Q15853 346 aaPredicted RBP11.21□□□□□ -0.61
UBXN1-218ENST00000616865 FFAR4Q5NUL3 377 aa11.21□□□□□ -0.61
UBXN1-218ENST00000616865 C9orf62Q8N4C0 152 aa11.21□□□□□ -0.61
UBXN1-218ENST00000616865 PFDN5Q99471 154 aa11.21□□□□□ -0.61
UBXN1-218ENST00000616865 MRPL27Q9P0M9 148 aaKnown RBP11.21□□□□□ -0.61
UBXN1-218ENST00000616865 TIMM9Q9Y5J7 89 aa11.21□□□□□ -0.61
UBXN1-218ENST00000616865 ELOA3CA0A087WX78 387 aaPredicted RBP11.2□□□□□ -0.62
UBXN1-218ENST00000616865 IGHV7-4-1A0A0J9YVY3 117 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 TMEM213A2RRL7 107 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 CSN3P07498 182 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 IGHV4-30-4P0DP06 118 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 CBLN1P23435 193 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 ATP6V0CP27449 155 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 PRR20EP86478 221 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 PRR20CP86479 221 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 PRR20DP86480 221 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 PRR20BP86481 221 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 PRR20AP86496 221 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 C10orf113Q5VZT2 155 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 KRTAP17-1Q9BYP8 105 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 DNAJC4Q9NNZ3 241 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 CYTL1Q9NRR1 136 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 SMPXQ9UHP9 88 aa11.2□□□□□ -0.62
UBXN1-218ENST00000616865 IGHV3OR16-13A0A075B7E8 117 aa11.19□□□□□ -0.62
UBXN1-218ENST00000616865 IGHV3-74A0A0B4J1X5 117 aa11.19□□□□□ -0.62
UBXN1-218ENST00000616865 IGHV3-66A0A0C4DH42 116 aa11.19□□□□□ -0.62
UBXN1-218ENST00000616865 A8MZ25 164 aa11.19□□□□□ -0.62
UBXN1-218ENST00000616865 BOLA2-SMG1P6H3BVE0 249 aa11.19□□□□□ -0.62
UBXN1-218ENST00000616865 TPT1P13693 172 aaKnown RBP11.19□□□□□ -0.62
UBXN1-218ENST00000616865 CRYBB3P26998 211 aa11.19□□□□□ -0.62
UBXN1-218ENST00000616865 PLP1P60201 277 aa11.19□□□□□ -0.62
UBXN1-218ENST00000616865 ACOT6Q3I5F7 207 aaPredicted RBP11.19□□□□□ -0.62
UBXN1-218ENST00000616865 Q8N1Y9 231 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms