RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 TRBV12-3P01733 135 aa8.78□□□□□ -1
SLIRP-212ENST00000613856 IL4P05112 153 aa8.78□□□□□ -1
SLIRP-212ENST00000613856 LYZP61626 148 aa8.78□□□□□ -1
SLIRP-212ENST00000613856 FAM122CQ6P4D5 195 aa8.78□□□□□ -1
SLIRP-212ENST00000613856 PATE2Q6UY27 113 aa8.78□□□□□ -1
SLIRP-212ENST00000613856 LYPD6BQ8NI32 183 aa8.78□□□□□ -1
SLIRP-212ENST00000613856 C4orf3Q8WVX3 66 aa8.78□□□□□ -1
SLIRP-212ENST00000613856 MBD3L1Q8WWY6 194 aa8.78□□□□□ -1
SLIRP-212ENST00000613856 TMEM37Q8WXS4 190 aa8.78□□□□□ -1
SLIRP-212ENST00000613856 ZFAND3Q9H8U3 227 aa8.78□□□□□ -1
SLIRP-212ENST00000613856 SLC25A22Q9H936 323 aa8.78□□□□□ -1
SLIRP-212ENST00000613856 DNAJC4Q9NNZ3 241 aa8.78□□□□□ -1
SLIRP-212ENST00000613856 FUT9Q9Y231 359 aa8.78□□□□□ -1
SLIRP-212ENST00000613856 PUS1Q9Y606 427 aaKnown RBP eCLIP8.78□□□□□ -1
SLIRP-212ENST00000613856 A0A1W2PPV4 95 aa8.77□□□□□ -1.01
SLIRP-212ENST00000613856 NDUFA4O00483 81 aa8.77□□□□□ -1.01
SLIRP-212ENST00000613856 GGCTO75223 188 aaKnown RBP8.77□□□□□ -1.01
SLIRP-212ENST00000613856 HBE1P02100 147 aa8.77□□□□□ -1.01
SLIRP-212ENST00000613856 H2AFB1P0C5Y9 115 aa8.77□□□□□ -1.01
SLIRP-212ENST00000613856 C10orf113Q5VZT2 155 aa8.77□□□□□ -1.01
SLIRP-212ENST00000613856 TOMM20LQ6UXN7 152 aa8.77□□□□□ -1.01
SLIRP-212ENST00000613856 SSX7Q7RTT5 188 aa8.77□□□□□ -1.01
SLIRP-212ENST00000613856 S100A7AQ86SG5 101 aa8.77□□□□□ -1.01
SLIRP-212ENST00000613856 OR1B1Q8NGR6 318 aa8.77□□□□□ -1.01
SLIRP-212ENST00000613856 RAB24Q969Q5 203 aa8.77□□□□□ -1.01
SLIRP-212ENST00000613856 MRPL27Q9P0M9 148 aaKnown RBP8.77□□□□□ -1.01
SLIRP-212ENST00000613856 HIGD1AQ9Y241 93 aa8.77□□□□□ -1.01
SLIRP-212ENST00000613856 COL7A1Q02388 2944 aa8.77□□□□□ -1.01
SLIRP-212ENST00000613856 ANKRD34BA5PLL1 514 aa8.76□□□□□ -1.01
SLIRP-212ENST00000613856 MAP1LC3B2A6NCE7 125 aa8.76□□□□□ -1.01
SLIRP-212ENST00000613856 H3BRN7 92 aa8.76□□□□□ -1.01
SLIRP-212ENST00000613856 HSPB1P04792 205 aaKnown RBP8.76□□□□□ -1.01
SLIRP-212ENST00000613856 STAG3L2P0CL84 134 aa8.76□□□□□ -1.01
SLIRP-212ENST00000613856 STAG3L3P0CL85 134 aa8.76□□□□□ -1.01
SLIRP-212ENST00000613856 CD28P10747 220 aa8.76□□□□□ -1.01
SLIRP-212ENST00000613856 ORM2P19652 201 aa8.76□□□□□ -1.01
SLIRP-212ENST00000613856 S100A7P31151 101 aa8.76□□□□□ -1.01
SLIRP-212ENST00000613856 TAS2R45P59539 299 aa8.76□□□□□ -1.01
SLIRP-212ENST00000613856 USF2Q15853 346 aaPredicted RBP8.76□□□□□ -1.01
SLIRP-212ENST00000613856 FAM78BQ5VT40 261 aa8.76□□□□□ -1.01
SLIRP-212ENST00000613856 PCNPQ8WW12 178 aaKnown RBP8.76□□□□□ -1.01
SLIRP-212ENST00000613856 TMEM190Q8WZ59 177 aa8.76□□□□□ -1.01
SLIRP-212ENST00000613856 MAP1LC3BQ9GZQ8 125 aa8.76□□□□□ -1.01
SLIRP-212ENST00000613856 SEPSECSQ9HD40 501 aaKnown RBP8.76□□□□□ -1.01
SLIRP-212ENST00000613856 MED9Q9NWA0 146 aa8.76□□□□□ -1.01
SLIRP-212ENST00000613856 DOK5Q9P104 306 aa8.76□□□□□ -1.01
SLIRP-212ENST00000613856 TSSC4Q9Y5U2 329 aaPredicted RBP8.76□□□□□ -1.01
SLIRP-212ENST00000613856 NOTCH3Q9UM47 2321 aa8.76□□□□□ -1.01
SLIRP-212ENST00000613856 LINC00862A6NCI5 91 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 TEX46H3BTG2 121 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 KHDC3LQ587J8 217 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 KHDC1LQ5JSQ8 128 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 KPRPQ5T749 579 aaPredicted RBP8.75□□□□□ -1.01
SLIRP-212ENST00000613856 SAMD5Q5TGI4 173 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 SPATA31B1PQ5VZV4 182 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 MIR17HGQ75NE6 70 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 LINC00305Q7Z4B0 112 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 GPHB5Q86YW7 130 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 KLHL30-AS1Q8NEE0 82 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 SFT2D1Q8WV19 159 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 OR5B12Q96R08 314 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 SHANK2-AS3Q9BTD1 123 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 PBDC1Q9BVG4 233 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 SLC25A39Q9BZJ4 359 aaPredicted RBP8.75□□□□□ -1.01
SLIRP-212ENST00000613856 TECRQ9NZ01 308 aaKnown RBP8.75□□□□□ -1.01
SLIRP-212ENST00000613856 RABAC1Q9UI14 185 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 RNF24Q9Y225 148 aa8.75□□□□□ -1.01
SLIRP-212ENST00000613856 IGHV4OR15-8A0A075B7B6 117 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 A0A087WW49 117 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 IGHV3-35A0A0C4DH35 117 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 NUDT19A8MXV4 375 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 C8orf88P0DMB2 117 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 ZP3P21754 424 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 PMS2P11Q13670 270 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 RPEL1Q2QD12 228 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 LCN15Q6UWW0 184 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 IL34Q6ZMJ4 242 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 PQLC2Q6ZP29 291 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 REC114Q7Z4M0 266 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 MRAPQ8TCY5 172 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 FAM167A-AS1Q96KT0 104 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 UHRF2Q96PU4 802 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 CITED2Q99967 270 aaPredicted RBP8.74□□□□□ -1.01
SLIRP-212ENST00000613856 HRH4Q9H3N8 390 aa8.74□□□□□ -1.01
SLIRP-212ENST00000613856 A8MWP6 167 aa8.73□□□□□ -1.01
SLIRP-212ENST00000613856 LINC01619G3V211 115 aa8.73□□□□□ -1.01
SLIRP-212ENST00000613856 LGALS9O00182 355 aa8.73□□□□□ -1.01
SLIRP-212ENST00000613856 CXorf1O96002 111 aa8.73□□□□□ -1.01
SLIRP-212ENST00000613856 ARL14EPLP0DKL9 152 aa8.73□□□□□ -1.01
SLIRP-212ENST00000613856 CRYBB3P26998 211 aa8.73□□□□□ -1.01
SLIRP-212ENST00000613856 FHL3Q13643 280 aa8.73□□□□□ -1.01
SLIRP-212ENST00000613856 NDUFA5Q16718 116 aa8.73□□□□□ -1.01
SLIRP-212ENST00000613856 FAM106AQ4KMX7 169 aa8.73□□□□□ -1.01
SLIRP-212ENST00000613856 MORN5Q5VZ52 161 aa8.73□□□□□ -1.01
SLIRP-212ENST00000613856 UNQ9165/PRO28630Q6UXU0 137 aa8.73□□□□□ -1.01
SLIRP-212ENST00000613856 C18orf65Q6ZTR6 163 aa8.73□□□□□ -1.01
SLIRP-212ENST00000613856 STXBP6Q8NFX7 210 aa8.73□□□□□ -1.01
SLIRP-212ENST00000613856 METTL26Q96S19 204 aa8.73□□□□□ -1.01
SLIRP-212ENST00000613856 SLC25A2Q9BXI2 301 aa8.73□□□□□ -1.01
SLIRP-212ENST00000613856 PFDN2Q9UHV9 154 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms