RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 PRB4P10163 310 aaPredicted RBP10.12□□□□□ -0.79
CDH1-212ENST00000611625 CLEC19AQ6UXS0 136 aa10.12□□□□□ -0.79
CDH1-212ENST00000611625 HBDP02042 147 aa10.12□□□□□ -0.79
CDH1-212ENST00000611625 SMIM13P0DJ93 91 aa10.12□□□□□ -0.79
CDH1-212ENST00000611625 NEUROG1Q92886 237 aa10.12□□□□□ -0.79
CDH1-212ENST00000611625 ADIPOQQ15848 244 aa10.11□□□□□ -0.79
CDH1-212ENST00000611625 FAM106AQ4KMX7 169 aa10.11□□□□□ -0.79
CDH1-212ENST00000611625 DTX1Q86Y01 620 aa10.11□□□□□ -0.79
CDH1-212ENST00000611625 KIR3DL3Q8N743 410 aa10.11□□□□□ -0.79
CDH1-212ENST00000611625 PCNX3Q9H6A9 2034 aa10.11□□□□□ -0.79
CDH1-212ENST00000611625 Q6ZS92 163 aa10.11□□□□□ -0.79
CDH1-212ENST00000611625 SYT8Q8NBV8 401 aa10.11□□□□□ -0.79
CDH1-212ENST00000611625 ALKBH7Q9BT30 221 aaPredicted RBP10.11□□□□□ -0.79
CDH1-212ENST00000611625 PCDH15Q96QU1 1955 aa10.11□□□□□ -0.79
CDH1-212ENST00000611625 TRAV8-1A0A0A6YYK1 113 aa10.11□□□□□ -0.79
CDH1-212ENST00000611625 H3BVH4 76 aa10.11□□□□□ -0.79
CDH1-212ENST00000611625 PSMG4Q5JS54 123 aa10.11□□□□□ -0.79
CDH1-212ENST00000611625 ZNF329Q86UD4 541 aa10.11□□□□□ -0.79
CDH1-212ENST00000611625 YPEL3P61236 119 aaPredicted RBP10.11□□□□□ -0.79
CDH1-212ENST00000611625 SIGLEC9Q9Y336 463 aa10.11□□□□□ -0.79
CDH1-212ENST00000611625 C19orf67A6NJJ6 358 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 CENPVQ7Z7K6 275 aaPredicted RBP10.1□□□□□ -0.79
CDH1-212ENST00000611625 VKORC1Q9BQB6 163 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 CACNG7P62955 275 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 C17orf58Q2M2W7 97 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 ZNF672Q499Z4 452 aaPredicted RBP10.1□□□□□ -0.79
CDH1-212ENST00000611625 FAM71F2Q6NXP2 309 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 LYPD2Q6UXB3 125 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 ASCL2Q99929 193 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 C20orf144Q9BQM9 153 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 NCOR1P1Q9H4R4 102 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 A0A0G2JNJ9 132 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 A0A1W2PPI3 338 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 FBLN7Q53RD9 439 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 SLC50A1Q9BRV3 221 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 Q9UFV3 132 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 GATA4P43694 442 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 PDLIM4P50479 330 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 ZNF134P52741 427 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 TTC9CQ8N5M4 171 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 PIMREGQ9BSJ6 248 aa10.1□□□□□ -0.79
CDH1-212ENST00000611625 DUX4L9Q6RFH8 374 aaPredicted RBP10.09□□□□□ -0.79
CDH1-212ENST00000611625 TMEM190Q8WZ59 177 aa10.09□□□□□ -0.79
CDH1-212ENST00000611625 GGTLC3B5MD39 225 aa10.09□□□□□ -0.79
CDH1-212ENST00000611625 IGLV1-44P01699 117 aa10.09□□□□□ -0.79
CDH1-212ENST00000611625 CFHR2P36980 270 aa10.09□□□□□ -0.79
CDH1-212ENST00000611625 CDKN1AP38936 164 aa10.09□□□□□ -0.79
CDH1-212ENST00000611625 TDGF1P3P51864 188 aa10.09□□□□□ -0.79
CDH1-212ENST00000611625 MRPL52Q86TS9 123 aaKnown RBP10.09□□□□□ -0.79
CDH1-212ENST00000611625 KIR2DL4Q99706 377 aa10.09□□□□□ -0.79
CDH1-212ENST00000611625 TSPOP30536 169 aa10.09□□□□□ -0.79
CDH1-212ENST00000611625 LEPP41159 167 aa10.09□□□□□ -0.79
CDH1-212ENST00000611625 ASIPP42127 132 aa10.09□□□□□ -0.79
CDH1-212ENST00000611625 FAM159AQ6UWV7 190 aa10.09□□□□□ -0.79
CDH1-212ENST00000611625 RNF5Q99942 180 aa10.09□□□□□ -0.79
CDH1-212ENST00000611625 PPBPP02775 128 aa10.08□□□□□ -0.8
CDH1-212ENST00000611625 RHOGP84095 191 aa10.08□□□□□ -0.8
CDH1-212ENST00000611625 FAM74A4Q5TZK3 123 aa10.08□□□□□ -0.8
CDH1-212ENST00000611625 DYNLRB2Q8TF09 96 aa10.08□□□□□ -0.8
CDH1-212ENST00000611625 NDUFA4L2Q9NRX3 87 aa10.08□□□□□ -0.8
CDH1-212ENST00000611625 SH2D7A6NKC9 451 aaPredicted RBP10.08□□□□□ -0.8
CDH1-212ENST00000611625 TOMM40O96008 361 aa10.08□□□□□ -0.8
CDH1-212ENST00000611625 C11orf52Q96A22 123 aa10.08□□□□□ -0.8
CDH1-212ENST00000611625 SNHG12Q9BXW3 62 aa10.08□□□□□ -0.8
CDH1-212ENST00000611625 KLF17Q5JT82 389 aaPredicted RBP10.08□□□□□ -0.8
CDH1-212ENST00000611625 RPRMLQ8N4K4 120 aa10.08□□□□□ -0.8
CDH1-212ENST00000611625 IFI27L1Q96BM0 104 aa10.08□□□□□ -0.8
CDH1-212ENST00000611625 MS4A6AQ9H2W1 248 aa10.08□□□□□ -0.8
CDH1-212ENST00000611625 V9GYV3 84 aa10.08□□□□□ -0.8
CDH1-212ENST00000611625 MALRD1Q5VYJ5 2156 aa10.08□□□□□ -0.8
CDH1-212ENST00000611625 NPIPB5A8MRT5 1133 aa10.08□□□□□ -0.8
CDH1-212ENST00000611625 CDPF1Q6NVV7 123 aa10.08□□□□□ -0.8
CDH1-212ENST00000611625 PPIFP30405 207 aaKnown RBP10.07□□□□□ -0.8
CDH1-212ENST00000611625 ATP5J2P56134 94 aa10.07□□□□□ -0.8
CDH1-212ENST00000611625 TPTE2P1Q5T6R2 138 aa10.07□□□□□ -0.8
CDH1-212ENST00000611625 NXT2Q9NPJ8 142 aaKnown RBP10.07□□□□□ -0.8
CDH1-212ENST00000611625 CACNA1BQ00975 2339 aa10.07□□□□□ -0.8
CDH1-212ENST00000611625 H3BUT2 72 aa10.07□□□□□ -0.8
CDH1-212ENST00000611625 C18orf32Q8TCD1 76 aa10.07□□□□□ -0.8
CDH1-212ENST00000611625 SCGB3A1Q96QR1 104 aa10.07□□□□□ -0.8
CDH1-212ENST00000611625 SPCS1Q9Y6A9 102 aa10.07□□□□□ -0.8
CDH1-212ENST00000611625 IGKV2-40A0A087WW87 121 aaPredicted RBP10.07□□□□□ -0.8
CDH1-212ENST00000611625 BUB1B-PAK6H3BSN5 160 aa10.07□□□□□ -0.8
CDH1-212ENST00000611625 IGKV2D-40P01614 121 aaPredicted RBP10.07□□□□□ -0.8
CDH1-212ENST00000611625 Q6ZWC4 215 aa10.07□□□□□ -0.8
CDH1-212ENST00000611625 PLCE1Q9P212 2302 aa10.07□□□□□ -0.8
CDH1-212ENST00000611625 C11orf53Q8IXP5 236 aa10.07□□□□□ -0.8
CDH1-212ENST00000611625 hDV102S1A0JD36 115 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 THBDP07204 575 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 VWC2Q2TAL6 325 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 TMEM249Q2WGJ8 235 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 D6R8Y8 96 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 SYS1-DBNDD2H3BUS1 97 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 ZNF56Q15929 161 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 Q86TA4 180 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 Q8TCH9 128 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 PYGO2Q9BRQ0 406 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.06□□□□□ -0.8
CDH1-212ENST00000611625 PPP1R17O96001 155 aa10.06□□□□□ -0.8
CDH1-212ENST00000611625 LGALS3P17931 250 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms