RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 NUP62P37198 522 aaPredicted RBP13.22□□□□□ -0.29
MUC1-224ENST00000611577 EIF2B2P49770 351 aaKnown RBP13.22□□□□□ -0.29
MUC1-224ENST00000611577 PAFAH1B2P68402 229 aa13.22□□□□□ -0.29
MUC1-224ENST00000611577 ARL16Q0P5N6 197 aa13.22□□□□□ -0.29
MUC1-224ENST00000611577 USF2Q15853 346 aaPredicted RBP13.22□□□□□ -0.29
MUC1-224ENST00000611577 TCF24Q7RTU0 167 aa13.22□□□□□ -0.29
MUC1-224ENST00000611577 OR11H7Q8NGC8 314 aa13.22□□□□□ -0.29
MUC1-224ENST00000611577 THAP6Q8TBB0 222 aa13.22□□□□□ -0.29
MUC1-224ENST00000611577 SPAG8Q99932 426 aaPredicted RBP13.22□□□□□ -0.29
MUC1-224ENST00000611577 OR4C46A6NHA9 309 aa13.21□□□□□ -0.29
MUC1-224ENST00000611577 TFPI2P48307 235 aa13.21□□□□□ -0.29
MUC1-224ENST00000611577 RAB31Q13636 194 aa13.21□□□□□ -0.29
MUC1-224ENST00000611577 CYP2G1PQ6ZSU1 146 aa13.21□□□□□ -0.29
MUC1-224ENST00000611577 IL17DQ8TAD2 202 aa13.21□□□□□ -0.29
MUC1-224ENST00000611577 NEURL2Q9BR09 285 aa13.21□□□□□ -0.29
MUC1-224ENST00000611577 TMEM147Q9BVK8 224 aa13.21□□□□□ -0.29
MUC1-224ENST00000611577 VSIRQ9H7M9 311 aa13.21□□□□□ -0.29
MUC1-224ENST00000611577 UQCC1Q9NVA1 299 aa13.21□□□□□ -0.29
MUC1-224ENST00000611577 UBE2L5PA0A1B0GUS4 154 aa13.2□□□□□ -0.3
MUC1-224ENST00000611577 H0YIZ8 118 aa13.2□□□□□ -0.3
MUC1-224ENST00000611577 DNASE2O00115 360 aaPredicted RBP13.2□□□□□ -0.3
MUC1-224ENST00000611577 S100A7P31151 101 aa13.2□□□□□ -0.3
MUC1-224ENST00000611577 SELENOTP62341 195 aa13.2□□□□□ -0.3
MUC1-224ENST00000611577 EWSR1Q01844 656 aaKnown RBP eCLIP13.2□□□□□ -0.3
MUC1-224ENST00000611577 FAM110AQ9BQ89 295 aa13.2□□□□□ -0.3
MUC1-224ENST00000611577 MBD2Q9UBB5 411 aa13.2□□□□□ -0.3
MUC1-224ENST00000611577 DFFBO76075 338 aa13.19□□□□□ -0.3
MUC1-224ENST00000611577 CD7P09564 240 aa13.19□□□□□ -0.3
MUC1-224ENST00000611577 ORM2P19652 201 aa13.19□□□□□ -0.3
MUC1-224ENST00000611577 GATA2P23769 480 aaPredicted RBP13.19□□□□□ -0.3
MUC1-224ENST00000611577 BAXQ07812 192 aa13.19□□□□□ -0.3
MUC1-224ENST00000611577 FGL1Q08830 312 aa13.19□□□□□ -0.3
MUC1-224ENST00000611577 ATP6V1FQ16864 119 aa13.19□□□□□ -0.3
MUC1-224ENST00000611577 ZNF546Q86UE3 836 aa13.19□□□□□ -0.3
MUC1-224ENST00000611577 GBGT1Q8N5D6 347 aa13.19□□□□□ -0.3
MUC1-224ENST00000611577 OR1B1Q8NGR6 318 aa13.19□□□□□ -0.3
MUC1-224ENST00000611577 HELTA6NFD8 242 aa13.18□□□□□ -0.3
MUC1-224ENST00000611577 LINC00869P0C866 280 aa13.18□□□□□ -0.3
MUC1-224ENST00000611577 RAP2BP61225 183 aa13.18□□□□□ -0.3
MUC1-224ENST00000611577 NHLH2Q02577 135 aa13.18□□□□□ -0.3
MUC1-224ENST00000611577 WFDC3Q8IUB2 231 aa13.18□□□□□ -0.3
MUC1-224ENST00000611577 STXBP6Q8NFX7 210 aa13.18□□□□□ -0.3
MUC1-224ENST00000611577 OR5C1Q8NGR4 320 aa13.18□□□□□ -0.3
MUC1-224ENST00000611577 ASB13Q8WXK3 278 aa13.18□□□□□ -0.3
MUC1-224ENST00000611577 DOK5Q9P104 306 aa13.18□□□□□ -0.3
MUC1-224ENST00000611577 AGPAT2O15120 278 aa13.17□□□□□ -0.3
MUC1-224ENST00000611577 GIPP09681 153 aaPredicted RBP13.17□□□□□ -0.3
MUC1-224ENST00000611577 OR5G3P0C626 314 aa13.17□□□□□ -0.3
MUC1-224ENST00000611577 RPL12P30050 165 aaKnown RBP13.17□□□□□ -0.3
MUC1-224ENST00000611577 AP2S1P53680 142 aaPredicted RBP13.17□□□□□ -0.3
MUC1-224ENST00000611577 CLINT1Q14677 625 aa13.17□□□□□ -0.3
MUC1-224ENST00000611577 S100A7AQ86SG5 101 aa13.17□□□□□ -0.3
MUC1-224ENST00000611577 RNF126Q9BV68 326 aa13.17□□□□□ -0.3
MUC1-224ENST00000611577 OR11H12B2RN74 326 aa13.16□□□□□ -0.3
MUC1-224ENST00000611577 FGF7P21781 194 aa13.16□□□□□ -0.3
MUC1-224ENST00000611577 CAMLGP49069 296 aa13.16□□□□□ -0.3
MUC1-224ENST00000611577 FAM90A2PQ658T7 463 aa13.16□□□□□ -0.3
MUC1-224ENST00000611577 C16orf54Q6UWD8 224 aa13.16□□□□□ -0.3
MUC1-224ENST00000611577 FBXL17Q9UF56 701 aa13.16□□□□□ -0.3
MUC1-224ENST00000611577 WDR83OSQ9Y284 106 aa13.16□□□□□ -0.3
MUC1-224ENST00000611577 U3KQE9 123 aa13.16□□□□□ -0.3
MUC1-224ENST00000611577 BUB3O43684 328 aa13.15□□□□□ -0.3
MUC1-224ENST00000611577 HYPMO75409 117 aa13.15□□□□□ -0.3
MUC1-224ENST00000611577 VWC2Q2TAL6 325 aa13.15□□□□□ -0.3
MUC1-224ENST00000611577 SIGLEC15Q6ZMC9 328 aa13.15□□□□□ -0.3
MUC1-224ENST00000611577 TMEM182Q6ZP80 229 aaPredicted RBP13.15□□□□□ -0.3
MUC1-224ENST00000611577 OR8I2Q8N0Y5 310 aa13.15□□□□□ -0.3
MUC1-224ENST00000611577 GLMPQ8WWB7 406 aa13.15□□□□□ -0.3
MUC1-224ENST00000611577 MGST2Q99735 147 aa13.15□□□□□ -0.3
MUC1-224ENST00000611577 ARL6Q9H0F7 186 aa13.15□□□□□ -0.3
MUC1-224ENST00000611577 MS4A6AQ9H2W1 248 aa13.15□□□□□ -0.3
MUC1-224ENST00000611577 SLC25A22Q9H936 323 aa13.15□□□□□ -0.3
MUC1-224ENST00000611577 UBQLN2Q9UHD9 624 aa13.15□□□□□ -0.3
MUC1-224ENST00000611577 HIGD1AQ9Y241 93 aa13.15□□□□□ -0.3
MUC1-224ENST00000611577 MPDU1O75352 247 aa13.14□□□□□ -0.31
MUC1-224ENST00000611577 CMC4P56277 68 aaPredicted RBP13.14□□□□□ -0.31
MUC1-224ENST00000611577 LINC00322Q6ZN03 302 aaPredicted RBP13.14□□□□□ -0.31
MUC1-224ENST00000611577 Q6ZRG5 221 aa13.14□□□□□ -0.31
MUC1-224ENST00000611577 DEFB125Q8N687 156 aa13.14□□□□□ -0.31
MUC1-224ENST00000611577 WFDC10AQ9H1F0 79 aa13.14□□□□□ -0.31
MUC1-224ENST00000611577 SRD5A3Q9H8P0 318 aa13.14□□□□□ -0.31
MUC1-224ENST00000611577 SLC45A2Q9UMX9 530 aa13.14□□□□□ -0.31
MUC1-224ENST00000611577 HSPB11Q9Y547 144 aa13.14□□□□□ -0.31
MUC1-224ENST00000611577 FRAS1Q86XX4 4008 aa13.14□□□□□ -0.31
MUC1-224ENST00000611577 COX7A2P2O60397 106 aa13.13□□□□□ -0.31
MUC1-224ENST00000611577 C1orf194Q5T5A4 169 aa13.13□□□□□ -0.31
MUC1-224ENST00000611577 PXDC1Q5TGL8 231 aa13.13□□□□□ -0.31
MUC1-224ENST00000611577 ZNF709Q8N972 641 aa13.13□□□□□ -0.31
MUC1-224ENST00000611577 OR2T35Q8NGX2 323 aa13.13□□□□□ -0.31
MUC1-224ENST00000611577 ATP5SQ99766 215 aa13.13□□□□□ -0.31
MUC1-224ENST00000611577 SMIM3Q9BZL3 60 aa13.13□□□□□ -0.31
MUC1-224ENST00000611577 HERC2O95714 4834 aa13.12□□□□□ -0.31
MUC1-224ENST00000611577 FXYD6-FXYD2A0A087WZ82 144 aa13.12□□□□□ -0.31
MUC1-224ENST00000611577 TRAV2A0A0B4J234 112 aa13.12□□□□□ -0.31
MUC1-224ENST00000611577 IFNA5P01569 189 aa13.12□□□□□ -0.31
MUC1-224ENST00000611577 STPG3Q8N7X2 389 aa13.12□□□□□ -0.31
MUC1-224ENST00000611577 GGTLC1Q9BX51 225 aa13.12□□□□□ -0.31
MUC1-224ENST00000611577 KRTAP17-1Q9BYP8 105 aa13.12□□□□□ -0.31
MUC1-224ENST00000611577 RNF24Q9Y225 148 aa13.12□□□□□ -0.31
MUC1-224ENST00000611577 ZNF98A6NK75 572 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms