RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 STX12Q86Y82 276 aa10.6□□□□□ -0.71
HDDC2-209ENST00000609477 STXBP6Q8NFX7 210 aa10.6□□□□□ -0.71
HDDC2-209ENST00000609477 DCANP1Q8TF63 244 aa10.6□□□□□ -0.71
HDDC2-209ENST00000609477 CITED4Q96RK1 184 aa10.6□□□□□ -0.71
HDDC2-209ENST00000609477 MAP6D1Q9H9H5 199 aa10.6□□□□□ -0.71
HDDC2-209ENST00000609477 NRN1Q9NPD7 142 aa10.6□□□□□ -0.71
HDDC2-209ENST00000609477 UBQLN2Q9UHD9 624 aa10.6□□□□□ -0.71
HDDC2-209ENST00000609477 RRAS2P62070 204 aaPredicted RBP10.59□□□□□ -0.71
HDDC2-209ENST00000609477 OR2F1Q13607 317 aa10.59□□□□□ -0.71
HDDC2-209ENST00000609477 RAB31Q13636 194 aa10.59□□□□□ -0.71
HDDC2-209ENST00000609477 ATP6V1FQ16864 119 aa10.59□□□□□ -0.71
HDDC2-209ENST00000609477 SAMD13Q5VXD3 122 aa10.59□□□□□ -0.71
HDDC2-209ENST00000609477 STPG3Q8N7X2 389 aa10.59□□□□□ -0.71
HDDC2-209ENST00000609477 GPR82Q96P67 336 aa10.59□□□□□ -0.71
HDDC2-209ENST00000609477 E5RGE8 158 aa10.58□□□□□ -0.72
HDDC2-209ENST00000609477 CCNKO75909 580 aa10.58□□□□□ -0.72
HDDC2-209ENST00000609477 PET100P0DJ07 73 aa10.58□□□□□ -0.72
HDDC2-209ENST00000609477 SNRPD3P62318 126 aaKnown RBP10.58□□□□□ -0.72
HDDC2-209ENST00000609477 SLC38A11Q08AI6 406 aa10.58□□□□□ -0.72
HDDC2-209ENST00000609477 Q6ZWC4 215 aa10.58□□□□□ -0.72
HDDC2-209ENST00000609477 ZNF546Q86UE3 836 aa10.58□□□□□ -0.72
HDDC2-209ENST00000609477 WFDC3Q8IUB2 231 aa10.58□□□□□ -0.72
HDDC2-209ENST00000609477 TMEM252Q8N6L7 170 aa10.58□□□□□ -0.72
HDDC2-209ENST00000609477 PPP1R14BQ96C90 147 aa10.58□□□□□ -0.72
HDDC2-209ENST00000609477 TMEM147Q9BVK8 224 aa10.58□□□□□ -0.72
HDDC2-209ENST00000609477 SLC25A31Q9H0C2 315 aa10.58□□□□□ -0.72
HDDC2-209ENST00000609477 TP53TG1Q9Y2A0 90 aa10.58□□□□□ -0.72
HDDC2-209ENST00000609477 FAM24AA6NFZ4 105 aa10.57□□□□□ -0.72
HDDC2-209ENST00000609477 ORM2P19652 201 aa10.57□□□□□ -0.72
HDDC2-209ENST00000609477 H2BFSP57053 126 aa10.57□□□□□ -0.72
HDDC2-209ENST00000609477 RAP2BP61225 183 aa10.57□□□□□ -0.72
HDDC2-209ENST00000609477 ARL16Q0P5N6 197 aa10.57□□□□□ -0.72
HDDC2-209ENST00000609477 VWC2Q2TAL6 325 aa10.57□□□□□ -0.72
HDDC2-209ENST00000609477 OR8I2Q8N0Y5 310 aa10.57□□□□□ -0.72
HDDC2-209ENST00000609477 UQCC1Q9NVA1 299 aa10.57□□□□□ -0.72
HDDC2-209ENST00000609477 NBEAL2Q6ZNJ1 2754 aa10.56□□□□□ -0.72
HDDC2-209ENST00000609477 ZNF98A6NK75 572 aa10.56□□□□□ -0.72
HDDC2-209ENST00000609477 HYPMO75409 117 aa10.56□□□□□ -0.72
HDDC2-209ENST00000609477 CST7O76096 145 aa10.56□□□□□ -0.72
HDDC2-209ENST00000609477 SIX6O95475 246 aa10.56□□□□□ -0.72
HDDC2-209ENST00000609477 GALR1P47211 349 aa10.56□□□□□ -0.72
HDDC2-209ENST00000609477 MEOX2P50222 304 aa10.56□□□□□ -0.72
HDDC2-209ENST00000609477 DEFB131AP59861 70 aa10.56□□□□□ -0.72
HDDC2-209ENST00000609477 BAXQ07812 192 aa10.56□□□□□ -0.72
HDDC2-209ENST00000609477 TMEM182Q6ZP80 229 aaPredicted RBP10.56□□□□□ -0.72
HDDC2-209ENST00000609477 APRG1Q8IVJ8 170 aa10.56□□□□□ -0.72
HDDC2-209ENST00000609477 OR1B1Q8NGR6 318 aa10.56□□□□□ -0.72
HDDC2-209ENST00000609477 CHAC2Q8WUX2 184 aa10.56□□□□□ -0.72
HDDC2-209ENST00000609477 STAB2Q8WWQ8 2551 aa10.55□□□□□ -0.72
HDDC2-209ENST00000609477 ELOA3CA0A087WX78 387 aaPredicted RBP10.55□□□□□ -0.72
HDDC2-209ENST00000609477 AGPAT2O15120 278 aa10.55□□□□□ -0.72
HDDC2-209ENST00000609477 MPDU1O75352 247 aa10.55□□□□□ -0.72
HDDC2-209ENST00000609477 LINC00869P0C866 280 aa10.55□□□□□ -0.72
HDDC2-209ENST00000609477 GATA2P23769 480 aaPredicted RBP10.55□□□□□ -0.72
HDDC2-209ENST00000609477 ID1P41134 155 aa10.55□□□□□ -0.72
HDDC2-209ENST00000609477 TMEM217Q8N7C4 229 aa10.55□□□□□ -0.72
HDDC2-209ENST00000609477 PPP1R1CQ8WVI7 109 aa10.55□□□□□ -0.72
HDDC2-209ENST00000609477 CSTL1Q9H114 145 aa10.55□□□□□ -0.72
HDDC2-209ENST00000609477 HIGD1AQ9Y241 93 aa10.55□□□□□ -0.72
HDDC2-209ENST00000609477 WDR83OSQ9Y284 106 aa10.55□□□□□ -0.72
HDDC2-209ENST00000609477 IGSF23A1L1A6 192 aa10.54□□□□□ -0.72
HDDC2-209ENST00000609477 ZNF688P0C7X2 276 aa10.54□□□□□ -0.72
HDDC2-209ENST00000609477 CAMLGP49069 296 aa10.54□□□□□ -0.72
HDDC2-209ENST00000609477 TMEM41BQ5BJD5 291 aa10.54□□□□□ -0.72
HDDC2-209ENST00000609477 Q6ZRG5 221 aa10.54□□□□□ -0.72
HDDC2-209ENST00000609477 STHQ8IWL8 128 aa10.54□□□□□ -0.72
HDDC2-209ENST00000609477 FAM24BQ8N5W8 94 aa10.54□□□□□ -0.72
HDDC2-209ENST00000609477 ASB13Q8WXK3 278 aa10.54□□□□□ -0.72
HDDC2-209ENST00000609477 SHANK2-AS3Q9BTD1 123 aa10.54□□□□□ -0.72
HDDC2-209ENST00000609477 SLC25A39Q9BZJ4 359 aaPredicted RBP10.54□□□□□ -0.72
HDDC2-209ENST00000609477 ALG5Q9Y673 324 aa10.54□□□□□ -0.72
HDDC2-209ENST00000609477 H3BRN7 92 aa10.53□□□□□ -0.72
HDDC2-209ENST00000609477 ISLRO14498 428 aa10.53□□□□□ -0.72
HDDC2-209ENST00000609477 MPC2O95563 127 aa10.53□□□□□ -0.72
HDDC2-209ENST00000609477 OR5G3P0C626 314 aa10.53□□□□□ -0.72
HDDC2-209ENST00000609477 RPL7P18124 248 aaKnown RBP10.53□□□□□ -0.72
HDDC2-209ENST00000609477 PSMB3P49720 205 aa10.53□□□□□ -0.72
HDDC2-209ENST00000609477 RGS21Q2M5E4 152 aa10.53□□□□□ -0.72
HDDC2-209ENST00000609477 LRRC37A5PQ49AS3 106 aa10.53□□□□□ -0.72
HDDC2-209ENST00000609477 MGST2Q99735 147 aa10.53□□□□□ -0.72
HDDC2-209ENST00000609477 ARL6Q9H0F7 186 aa10.53□□□□□ -0.72
HDDC2-209ENST00000609477 TENM3Q9P273 2699 aa10.53□□□□□ -0.72
HDDC2-209ENST00000609477 H0YIZ8 118 aa10.52□□□□□ -0.73
HDDC2-209ENST00000609477 SPP1P10451 314 aa10.52□□□□□ -0.73
HDDC2-209ENST00000609477 RPL35AP18077 110 aaKnown RBP10.52□□□□□ -0.73
HDDC2-209ENST00000609477 RPL29P47914 159 aaKnown RBP10.52□□□□□ -0.73
HDDC2-209ENST00000609477 EWSR1Q01844 656 aaKnown RBP eCLIP10.52□□□□□ -0.73
HDDC2-209ENST00000609477 ZNF124Q15973 351 aa10.52□□□□□ -0.73
HDDC2-209ENST00000609477 PSMG4Q5JS54 123 aa10.52□□□□□ -0.73
HDDC2-209ENST00000609477 SPATA31B1PQ5VZV4 182 aa10.52□□□□□ -0.73
HDDC2-209ENST00000609477 LEMD1Q68G75 181 aa10.52□□□□□ -0.73
HDDC2-209ENST00000609477 MORN3Q6PF18 240 aaPredicted RBP10.52□□□□□ -0.73
HDDC2-209ENST00000609477 GATAD1Q8WUU5 269 aa10.52□□□□□ -0.73
HDDC2-209ENST00000609477 RNF183Q96D59 192 aa10.52□□□□□ -0.73
HDDC2-209ENST00000609477 OVOL2Q9BRP0 275 aa10.52□□□□□ -0.73
HDDC2-209ENST00000609477 MED28Q9H204 178 aa10.52□□□□□ -0.73
HDDC2-209ENST00000609477 ARV1Q9H2C2 271 aa10.52□□□□□ -0.73
HDDC2-209ENST00000609477 SLC25A22Q9H936 323 aa10.52□□□□□ -0.73
HDDC2-209ENST00000609477 EDA2RQ9HAV5 297 aa10.52□□□□□ -0.73
HDDC2-209ENST00000609477 OR5AC2Q9NZP5 309 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms