RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 VAMP1P23763 118 aa5.46□□□□□ -1.54
CUX1-219ENST00000606749 PSMB3P49720 205 aa5.46□□□□□ -1.54
CUX1-219ENST00000606749 RPP30P78346 268 aaKnown RBP5.46□□□□□ -1.54
CUX1-219ENST00000606749 ZNF79Q15937 498 aa5.46□□□□□ -1.54
CUX1-219ENST00000606749 SPATA31B1PQ5VZV4 182 aa5.46□□□□□ -1.54
CUX1-219ENST00000606749 GSG1LQ6UXU4 331 aa5.46□□□□□ -1.54
CUX1-219ENST00000606749 FOXI2Q6ZQN5 318 aa5.46□□□□□ -1.54
CUX1-219ENST00000606749 OR8I2Q8N0Y5 310 aa5.46□□□□□ -1.54
CUX1-219ENST00000606749 ZNF709Q8N972 641 aa5.46□□□□□ -1.54
CUX1-219ENST00000606749 THAP8Q8NA92 274 aa5.46□□□□□ -1.54
CUX1-219ENST00000606749 SLC25A21Q9BQT8 299 aaPredicted RBP5.46□□□□□ -1.54
CUX1-219ENST00000606749 SCRT1Q9BWW7 348 aa5.46□□□□□ -1.54
CUX1-219ENST00000606749 PAIP2BQ9ULR5 123 aaKnown RBP5.46□□□□□ -1.54
CUX1-219ENST00000606749 TMED3Q9Y3Q3 217 aa5.46□□□□□ -1.54
CUX1-219ENST00000606749 V9GYH0 126 aa5.46□□□□□ -1.54
CUX1-219ENST00000606749 IGHV3OR16-12A0A075B7B8 117 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 TMEM189A5PLL7 270 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 PRSS46E5RG02 174 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 WRBO00258 174 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 ISLRO14498 428 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 SYNGR2O43760 224 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 CFDP00746 253 aaPredicted RBP5.45□□□□□ -1.54
CUX1-219ENST00000606749 HOXB5P09067 269 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 EMP1P54849 157 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 PAX9P55771 341 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 PSG9Q00887 426 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 PPP1R1AQ13522 171 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 GGNBP1Q5YKI7 109 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 EBLN2Q6P2I7 272 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 TMEM182Q6ZP80 229 aaPredicted RBP5.45□□□□□ -1.54
CUX1-219ENST00000606749 POM121L12Q8N7R1 296 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 OR4B1Q8NGF8 309 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 COQ8AQ8NI60 647 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 DEDD2Q8WXF8 326 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 PPP1R14BQ96C90 147 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 C20orf173Q96LM9 149 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 C17orf77Q96MU5 243 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 CIB3Q96Q77 187 aaPredicted RBP5.45□□□□□ -1.54
CUX1-219ENST00000606749 NDUFAF3Q9BU61 184 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 KRTAP17-1Q9BYP8 105 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 MAGT1Q9H0U3 335 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 SLC35B3Q9H1N7 401 aa5.45□□□□□ -1.54
CUX1-219ENST00000606749 A0A0J9YX75 114 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 ZNF98A6NK75 572 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 F6UB75 175 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 AMBPP02760 352 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 P0DMU3 169 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 FAM231AP0DMU4 169 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 FAM231CP0DMU5 169 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 GATA2P23769 480 aaPredicted RBP5.44□□□□□ -1.54
CUX1-219ENST00000606749 GALR1P47211 349 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 ID3Q02535 119 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 SPANXN5Q5MJ07 72 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 FAM78BQ5VT40 261 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 CCDC190Q86UF4 302 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 C1orf158Q8N1D5 194 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 OR4D5Q8NGN0 318 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 C16orf92Q96LL3 132 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 RSG1Q9BU20 258 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 SLC25A32Q9H2D1 315 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 RPRMQ9NS64 109 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 PLA2G2EQ9NZK7 142 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 DKK2Q9UBU2 259 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 SLC45A2Q9UMX9 530 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 RFNGQ9Y644 331 aa5.44□□□□□ -1.54
CUX1-219ENST00000606749 C9orf170A2RU37 121 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 A8MTW9 85 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 ORM2P19652 201 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 S100A5P33763 92 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 MEOX2P50222 304 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 FAM222AQ5U5X8 452 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 SAMD13Q5VXD3 122 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 LINC00336Q6ZUF6 198 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 TMEM144Q7Z5S9 345 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 BPIFCQ8NFQ6 507 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 OR1B1Q8NGR6 318 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 NIPSNAP3BQ9BS92 247 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 SLC25A22Q9H936 323 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 DOK5Q9P104 306 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 GOLT1BQ9Y3E0 138 aa5.43□□□□□ -1.54
CUX1-219ENST00000606749 STRAPQ9Y3F4 350 aaKnown RBP5.43□□□□□ -1.54
CUX1-219ENST00000606749 VPS13DQ5THJ4 4388 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 CCDC160A6NGH7 325 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 PMS2P5A8MQ11 134 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 H3BP45 60 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 ADAP1O75689 374 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 HBE1P02100 147 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 S100A7P31151 101 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 UBE2MP61081 183 aaKnown RBP5.42□□□□□ -1.54
CUX1-219ENST00000606749 POLR2GP62487 172 aaKnown RBP eCLIP5.42□□□□□ -1.54
CUX1-219ENST00000606749 AKR1C1Q04828 323 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 OXA1LQ15070 435 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 BAK1Q16611 211 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 IGFL4Q6B9Z1 124 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 AMTNQ6UX39 209 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 FAM210BQ96KR6 192 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 GPR82Q96P67 336 aa5.42□□□□□ -1.54
CUX1-219ENST00000606749 C7orf50Q9BRJ6 194 aaKnown RBP5.42□□□□□ -1.54
CUX1-219ENST00000606749 TMEM147Q9BVK8 224 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms