RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 ELOVL1Q9BW60 279 aa5.83□□□□□ -1.48
MSH6-211ENST00000606499 ZNF471Q9BX82 626 aaPredicted RBP5.83□□□□□ -1.48
MSH6-211ENST00000606499 SLC39A9Q9NUM3 307 aa5.83□□□□□ -1.48
MSH6-211ENST00000606499 MLXQ9UH92 298 aa5.83□□□□□ -1.48
MSH6-211ENST00000606499 RABAC1Q9UI14 185 aa5.83□□□□□ -1.48
MSH6-211ENST00000606499 DNAH3Q8TD57 4116 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 NOTCH1P46531 2555 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 IGHV7-4-1A0A0J9YVY3 117 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 C17orf112F2Z3M2 114 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 K7EMT4 169 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 COX7A2P2O60397 106 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 HYPMO75409 117 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 JTBO76095 146 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 CFDP00746 253 aaPredicted RBP5.82□□□□□ -1.48
MSH6-211ENST00000606499 HNRNPCP07910 306 aaKnown RBP eCLIP5.82□□□□□ -1.48
MSH6-211ENST00000606499 NPPCP23582 126 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 CRYBB3P26998 211 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 PLP1P60201 277 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 FFAR4Q5NUL3 377 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 MORN5Q5VZ52 161 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 LEMD1Q68G75 181 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 WFDC9Q8NEX5 89 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 TMEM37Q8WXS4 190 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 ST8SIA2Q92186 375 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 METTL26Q96S19 204 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 SCRT1Q9BWW7 348 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 ARV1Q9H2C2 271 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 KCNIP2Q9NS61 270 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 PLA2G2EQ9NZK7 142 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 MRPL27Q9P0M9 148 aaKnown RBP5.82□□□□□ -1.48
MSH6-211ENST00000606499 SMPXQ9UHP9 88 aa5.82□□□□□ -1.48
MSH6-211ENST00000606499 MGAM2Q2M2H8 2515 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 H3BRN7 92 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 CHEK1O14757 476 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 C8orf88P0DMB2 117 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 RAB2AP61019 212 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 OXLD1Q5BKU9 147 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 PXDC1Q5TGL8 231 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 C10orf113Q5VZT2 155 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 Q6ZRG5 221 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 DYNLRB2Q8TF09 96 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 MARC2Q969Z3 335 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 PPP1R14BQ96C90 147 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 GNPNAT1Q96EK6 184 aaPredicted RBP5.81□□□□□ -1.48
MSH6-211ENST00000606499 RNF2Q99496 336 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 PSMG3Q9BT73 122 aaPredicted RBP5.81□□□□□ -1.48
MSH6-211ENST00000606499 RHPN1-AS1Q9BWJ2 59 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 SLC25A32Q9H2D1 315 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 VSIRQ9H7M9 311 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 SLC25A22Q9H936 323 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 SIGLEC8Q9NYZ4 499 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 HIGD1AQ9Y241 93 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 TIMM9Q9Y5J7 89 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 U3KQE9 123 aa5.81□□□□□ -1.48
MSH6-211ENST00000606499 ELOA3CA0A087WX78 387 aaPredicted RBP5.8□□□□□ -1.48
MSH6-211ENST00000606499 IZUMO1RA6ND01 250 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 ZNF98A6NK75 572 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 G3V4G9 280 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 BUB3O43684 328 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 EIF3GO75821 320 aaKnown RBP eCLIP5.8□□□□□ -1.48
MSH6-211ENST00000606499 IGLV1-51P01701 117 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 SPP1P10451 314 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 TPT1P13693 172 aaKnown RBP5.8□□□□□ -1.48
MSH6-211ENST00000606499 C9orf66Q5T8R8 295 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 SPATA31B1PQ5VZV4 182 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 LINC00305Q7Z4B0 112 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 BAP18Q8IXM2 172 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 TMEM61Q8N0U2 210 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 OR1L4Q8NGR5 311 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 OR2G3Q8NGZ4 309 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 STOML3Q8TAV4 291 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 TMED6Q8WW62 240 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 GLMPQ8WWB7 406 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 NARS2Q96I59 477 aaKnown RBP5.8□□□□□ -1.48
MSH6-211ENST00000606499 PFDN5Q99471 154 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 SHANK2-AS3Q9BTD1 123 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 MCRIP2Q9BUT9 160 aaKnown RBP5.8□□□□□ -1.48
MSH6-211ENST00000606499 SLC25A39Q9BZJ4 359 aaPredicted RBP5.8□□□□□ -1.48
MSH6-211ENST00000606499 SEPSECSQ9HD40 501 aaKnown RBP5.8□□□□□ -1.48
MSH6-211ENST00000606499 DNAJC4Q9NNZ3 241 aa5.8□□□□□ -1.48
MSH6-211ENST00000606499 IGKV3-7A0A075B6H7 116 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 TRAV5A0A0B4J249 113 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 M6PRP20645 277 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 DEFB114Q30KQ6 69 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 ACOT6Q3I5F7 207 aaPredicted RBP5.79□□□□□ -1.48
MSH6-211ENST00000606499 CD300EQ496F6 205 aaPredicted RBP5.79□□□□□ -1.48
MSH6-211ENST00000606499 FAM78BQ5VT40 261 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 FAM122CQ6P4D5 195 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 C16orf54Q6UWD8 224 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 MIR17HGQ75NE6 70 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 TCF24Q7RTU0 167 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 SLC51BQ86UW2 128 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 OR10G4Q8NGN3 311 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 OR10G9Q8NGN4 311 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 OR10G7Q8NGN6 311 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 GATAD1Q8WUU5 269 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 GRAMD2BQ96HH9 432 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 TMEM231Q9H6L2 316 aa5.79□□□□□ -1.48
MSH6-211ENST00000606499 A0A1W2PS18 150 aa5.78□□□□□ -1.48
MSH6-211ENST00000606499 HMGB3O15347 200 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms