RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 VMA21Q3ZAQ7 101 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 LIN52Q52LA3 116 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 ACSM3Q53FZ2 586 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 HSP90AA4PQ58FG1 418 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 RNASE13Q5GAN3 156 aaKnown RBP0.14□□□□□ -2.39
CEP290-208ENST00000604024 C1orf194Q5T5A4 169 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 AMMECR1LQ6DCA0 310 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 OR2T2Q6IF00 324 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 ZNF322Q6U7Q0 402 aaPredicted RBP0.14□□□□□ -2.39
CEP290-208ENST00000604024 ATP11AUNQ6ZP68 121 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 PID1Q7Z2X4 250 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 TRAPPC6BQ86SZ2 158 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 ZNF546Q86UE3 836 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 PDPNQ86YL7 162 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 CLVS1Q8IUQ0 354 aaPredicted RBP0.14□□□□□ -2.39
CEP290-208ENST00000604024 PUSL1Q8N0Z8 303 aaKnown RBP0.14□□□□□ -2.39
CEP290-208ENST00000604024 CBR4Q8N4T8 237 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 FBXO36Q8NEA4 188 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 LFNGQ8NES3 379 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 BPIFCQ8NFQ6 507 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 OR9I1Q8NGQ6 314 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 ACTL9Q8TC94 416 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 TCP10LQ8TDR4 215 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 BAALCQ8WXS3 180 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 ACOT12Q8WYK0 555 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 GPR82Q96P67 336 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 OLFM3Q96PB7 478 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 ODF3Q96PU9 254 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 TSPAN32Q96QS1 320 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 OR5B12Q96R08 314 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 SORT1Q99523 831 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 PRADC1Q9BSG0 188 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 SPXQ9BT56 116 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 MRPL13Q9BYD1 178 aaKnown RBP0.14□□□□□ -2.39
CEP290-208ENST00000604024 IMUPQ9GZP8 106 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 EIF5A2Q9GZV4 153 aaKnown RBP0.14□□□□□ -2.39
CEP290-208ENST00000604024 WFDC10AQ9H1F0 79 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 SPACA1Q9HBV2 294 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 SLC35D1Q9NTN3 355 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 COA4Q9NYJ1 87 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 TAS2R1Q9NYW7 299 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 CACFD1Q9UGQ2 172 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 FLVCR2Q9UPI3 526 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 WASHC3Q9Y3C0 194 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 LPAP08519 4548 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 CSMD3Q7Z407 3707 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 FAM236DA0A1B0GTK5 79 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 EXOC1LA0A1B0GW35 172 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 TMEM72A0PK05 275 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 XKRY2A2RUG3 117 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 PRORSD1PA6NEY8 169 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 TRDCB7Z8K6 153 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 C9JVG2 144 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 G3V318 75 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 UPK1AO00322 258 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 DEFB4AO15263 64 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 CCL25O15444 150 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 NUPL2O15504 423 aaKnown RBP0.14□□□□□ -2.39
CEP290-208ENST00000604024 ZNF73O43830 326 aaPredicted RBP0.14□□□□□ -2.39
CEP290-208ENST00000604024 ENTPD6O75354 484 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 SLC22A5O76082 557 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 CFDP00746 253 aaPredicted RBP0.14□□□□□ -2.39
CEP290-208ENST00000604024 FABP1P07148 127 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 TPM2P07951 284 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 ZNF688P0C7X2 276 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 ZNF735P0CB33 412 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 FAM236CP0DP71 79 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 DEFB130BP0DP73 79 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 DEFB130AP0DP74 79 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 MLNP12872 115 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 NPPCP23582 126 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 CDK2P24941 298 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 PSMB9P28065 219 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 MIPP30301 263 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 ZNF93P35789 620 aaPredicted RBP0.14□□□□□ -2.39
CEP290-208ENST00000604024 SLC1A2P43004 574 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 IDH2P48735 452 aaKnown RBP0.14□□□□□ -2.39
CEP290-208ENST00000604024 INPP1P49441 399 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 POLR2JP52435 117 aaKnown RBP0.14□□□□□ -2.39
CEP290-208ENST00000604024 ZNF138P52744 262 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 CRYBA4P53673 196 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 HCCSP53701 268 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 EDDM3BP56851 147 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 ERVS71-1P61550 626 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 HAMPP81172 84 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 QRFPP83859 136 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 TSPAN31Q12999 210 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 KRR1Q13601 381 aaKnown RBP0.14□□□□□ -2.39
CEP290-208ENST00000604024 DIAPH2-AS1Q14236 149 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 RHOHQ15669 191 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 TOMM34Q15785 309 aaPredicted RBP0.14□□□□□ -2.39
CEP290-208ENST00000604024 GRK1Q15835 563 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 MAJINQ3KP22 176 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 OR10J3Q5JRS4 329 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 C1orf137Q5JT78 98 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 TEX30Q5JUR7 227 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 IDNKQ5T6J7 187 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 PRAMEF6Q5VXH4 476 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 METTL21CQ5VZV1 264 aa0.14□□□□□ -2.39
CEP290-208ENST00000604024 NCBP2-AS2Q69YL0 99 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms