RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 OR2J3O76001 311 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 OR5G3P0C626 314 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 MYCNOSP40205 109 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 C15orf32Q32M92 178 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 C8orf86Q6ZUL3 223 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 SVBPQ8N300 66 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 OR1L4Q8NGR5 311 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 OR4X1Q8NH49 305 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 DPF1Q92782 380 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 EEF1AKMT3Q96AZ1 226 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 FANCD2OSQ96PS1 177 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 PFDN5Q99471 154 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 RARRES2Q99969 163 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 MRPL32Q9BYC8 188 aaKnown RBP7.8□□□□□ -1.16
UPF1-213ENST00000601981 VAX2Q9UIW0 290 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 FUT9Q9Y231 359 aa7.8□□□□□ -1.16
UPF1-213ENST00000601981 TRBV7-1A0A0A6YYK4 115 aa7.79□□□□□ -1.16
UPF1-213ENST00000601981 ADARB2-AS1A8MUL3 147 aa7.79□□□□□ -1.16
UPF1-213ENST00000601981 HMGB3O15347 200 aaKnown RBP7.79□□□□□ -1.16
UPF1-213ENST00000601981 SCGB2A1O75556 95 aa7.79□□□□□ -1.16
UPF1-213ENST00000601981 CXorf1O96002 111 aa7.79□□□□□ -1.16
UPF1-213ENST00000601981 IGHV3-11P01762 117 aa7.79□□□□□ -1.16
UPF1-213ENST00000601981 IGHV3-48P01763 117 aa7.79□□□□□ -1.16
UPF1-213ENST00000601981 SRP19P09132 144 aaKnown RBP7.79□□□□□ -1.16
UPF1-213ENST00000601981 DEFA5Q01523 94 aa7.79□□□□□ -1.16
UPF1-213ENST00000601981 RXFP4Q8TDU9 374 aa7.79□□□□□ -1.16
UPF1-213ENST00000601981 GATAD1Q8WUU5 269 aa7.79□□□□□ -1.16
UPF1-213ENST00000601981 OR5B12Q96R08 314 aa7.79□□□□□ -1.16
UPF1-213ENST00000601981 GAR1Q9NY12 217 aaKnown RBP7.79□□□□□ -1.16
UPF1-213ENST00000601981 LINC01619G3V211 115 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 CCL24O00175 119 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 COX7A2P2O60397 106 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 CLN5O75503 358 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 EIF3GO75821 320 aaKnown RBP eCLIP7.78□□□□□ -1.16
UPF1-213ENST00000601981 SNAPINO95295 136 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 FABP1P07148 127 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 IGLC1P0CG04 106 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 ARL14EPLP0DKL9 152 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 GATA2P23769 480 aaPredicted RBP7.78□□□□□ -1.16
UPF1-213ENST00000601981 TAS2R45P59539 299 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 PLP1P60201 277 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 ZNF90Q03938 601 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 KIAA0141Q14154 515 aaPredicted RBP7.78□□□□□ -1.16
UPF1-213ENST00000601981 GUCA2BQ16661 112 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 PRR31Q5SQ13 230 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 FAM78BQ5VT40 261 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 SPATA31B1PQ5VZV4 182 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 HIST2H2BDQ6DRA6 164 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 ZNF343Q6P1L6 599 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 OR11H1Q8NG94 326 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 OR1N2Q8NGR9 330 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 VN1R17PQ8TDU5 208 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 TXNDC17Q9BRA2 123 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 TMPRSS5Q9H3S3 457 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 GNB4Q9HAV0 340 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 SEPSECSQ9HD40 501 aaKnown RBP7.78□□□□□ -1.16
UPF1-213ENST00000601981 DNAJC4Q9NNZ3 241 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 TECRQ9NZ01 308 aaKnown RBP7.78□□□□□ -1.16
UPF1-213ENST00000601981 PEF1Q9UBV8 284 aaKnown RBP7.78□□□□□ -1.16
UPF1-213ENST00000601981 ARL2-SNX15V9GYD0 113 aa7.78□□□□□ -1.16
UPF1-213ENST00000601981 TRAV30A0A087WSZ9 112 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 ELOA3CA0A087WX78 387 aaPredicted RBP7.77□□□□□ -1.17
UPF1-213ENST00000601981 IGHV3-21A0A0B4J1V1 117 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 NDUFB8O95169 186 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 C8orf88P0DMB2 117 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 CD33P20138 364 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 GCHFRP30047 84 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 FCGR2BP31994 310 aaPredicted RBP7.77□□□□□ -1.17
UPF1-213ENST00000601981 NPBWR1P48145 328 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 MFAP4P55083 255 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 MEF2BQ02080 365 aaPredicted RBP7.77□□□□□ -1.17
UPF1-213ENST00000601981 DEFB136Q30KP8 78 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 SOHLH1Q5JUK2 328 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 PQLC2Q6ZP29 291 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 MIR17HGQ75NE6 70 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 IQCF2Q8IXL9 164 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 CYB561D1Q8N8Q1 229 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 TMEM37Q8WXS4 190 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 RAX2Q96IS3 184 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 ATP6V0BQ99437 205 aa7.77□□□□□ -1.17
UPF1-213ENST00000601981 NKX6-2Q9C056 277 aaPredicted RBP7.77□□□□□ -1.17
UPF1-213ENST00000601981 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.76□□□□□ -1.17
UPF1-213ENST00000601981 TMEM250H0YL14 139 aa7.76□□□□□ -1.17
UPF1-213ENST00000601981 SCO1O75880 301 aa7.76□□□□□ -1.17
UPF1-213ENST00000601981 IGKV1-17P01599 117 aa7.76□□□□□ -1.17
UPF1-213ENST00000601981 CD81P60033 236 aa7.76□□□□□ -1.17
UPF1-213ENST00000601981 FHL3Q13643 280 aa7.76□□□□□ -1.17
UPF1-213ENST00000601981 RPEL1Q2QD12 228 aa7.76□□□□□ -1.17
UPF1-213ENST00000601981 C10orf113Q5VZT2 155 aa7.76□□□□□ -1.17
UPF1-213ENST00000601981 PATE2Q6UY27 113 aa7.76□□□□□ -1.17
UPF1-213ENST00000601981 C18orf65Q6ZTR6 163 aa7.76□□□□□ -1.17
UPF1-213ENST00000601981 SUN5Q8TC36 379 aa7.76□□□□□ -1.17
UPF1-213ENST00000601981 TXN2Q99757 166 aa7.76□□□□□ -1.17
UPF1-213ENST00000601981 MCRIP2Q9BUT9 160 aaKnown RBP7.76□□□□□ -1.17
UPF1-213ENST00000601981 GPR61Q9BZJ8 451 aa7.76□□□□□ -1.17
UPF1-213ENST00000601981 TMEM167BQ9NRX6 74 aa7.76□□□□□ -1.17
UPF1-213ENST00000601981 C21orf62Q9NYP8 219 aa7.76□□□□□ -1.17
UPF1-213ENST00000601981 IGHV4OR15-8A0A075B7B6 117 aa7.75□□□□□ -1.17
UPF1-213ENST00000601981 A0A087WW49 117 aa7.75□□□□□ -1.17
UPF1-213ENST00000601981 PDE6DO43924 150 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms