RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 CORTO00230 105 aa9.25□□□□□ -0.93
VRK3-223ENST00000601341 ISLRO14498 428 aa9.25□□□□□ -0.93
VRK3-223ENST00000601341 MT-ND6P03923 174 aa9.25□□□□□ -0.93
VRK3-223ENST00000601341 TNXAQ16473 311 aa9.25□□□□□ -0.93
VRK3-223ENST00000601341 TIGITQ495A1 244 aa9.25□□□□□ -0.93
VRK3-223ENST00000601341 FBLN7Q53RD9 439 aa9.25□□□□□ -0.93
VRK3-223ENST00000601341 GBGT1Q8N5D6 347 aa9.25□□□□□ -0.93
VRK3-223ENST00000601341 OR5T1Q8NG75 326 aa9.25□□□□□ -0.93
VRK3-223ENST00000601341 PIFOQ8TCI5 191 aa9.25□□□□□ -0.93
VRK3-223ENST00000601341 ZNF503Q96F45 646 aa9.25□□□□□ -0.93
VRK3-223ENST00000601341 TEX15Q9BXT5 2789 aa9.25□□□□□ -0.93
VRK3-223ENST00000601341 TCRBV4S1A1TA0A5B7 111 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 FCN1O00602 326 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 OR7C2O60412 319 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 GZMBP10144 247 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 ESDP10768 282 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 RPL27AP46776 148 aaKnown RBP9.24□□□□□ -0.93
VRK3-223ENST00000601341 RPEL1Q2QD12 228 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 OR10W1Q8NGF6 305 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 SMIM12Q96EX1 92 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 FAM167A-AS1Q96KT0 104 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 GNB1LQ9BYB4 327 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 CDC42EP3Q9UKI2 254 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 MAST4O15021 2626 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 ZNF469Q96JG9 3925 aaPredicted RBP9.24□□□□□ -0.93
VRK3-223ENST00000601341 CNIH1O95406 144 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 CRYGCP07315 174 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 ZNF90Q03938 601 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 WT1-ASQ06250 92 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 KRTAP1-1Q07627 177 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 DEFB112Q30KQ8 113 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 C10orf55Q5SWW7 151 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 WDR73Q6P4I2 378 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 BCL6BQ8N143 479 aaPredicted RBP9.24□□□□□ -0.93
VRK3-223ENST00000601341 C22orf15Q8WYQ4 148 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 RBM14Q96PK6 669 aaKnown RBP9.24□□□□□ -0.93
VRK3-223ENST00000601341 RASL11BQ9BPW5 248 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 SRSF8Q9BRL6 282 aaKnown RBP9.24□□□□□ -0.93
VRK3-223ENST00000601341 V9GYV3 84 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 CELSR1Q9NYQ6 3014 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 AKAP9Q99996 3911 aa9.24□□□□□ -0.93
VRK3-223ENST00000601341 PGPEP1LA6NFU8 196 aa9.23□□□□□ -0.93
VRK3-223ENST00000601341 CGB1A6NKQ9 187 aa9.23□□□□□ -0.93
VRK3-223ENST00000601341 GGTLC3B5MD39 225 aa9.23□□□□□ -0.93
VRK3-223ENST00000601341 E7EUB6 86 aa9.23□□□□□ -0.93
VRK3-223ENST00000601341 H3BUX3 64 aa9.23□□□□□ -0.93
VRK3-223ENST00000601341 ERVFC1-1P60608 527 aa9.23□□□□□ -0.93
VRK3-223ENST00000601341 DEFA6Q01524 100 aa9.23□□□□□ -0.93
VRK3-223ENST00000601341 CENPWQ5EE01 88 aa9.23□□□□□ -0.93
VRK3-223ENST00000601341 RASL11AQ6T310 242 aa9.23□□□□□ -0.93
VRK3-223ENST00000601341 ZNF562Q6V9R5 426 aa9.23□□□□□ -0.93
VRK3-223ENST00000601341 Q8N9W7 124 aa9.23□□□□□ -0.93
VRK3-223ENST00000601341 NOL4LQ96MY1 436 aaPredicted RBP9.23□□□□□ -0.93
VRK3-223ENST00000601341 YAE1D1Q9NRH1 226 aa9.23□□□□□ -0.93
VRK3-223ENST00000601341 COX7A2P2O60397 106 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 PAFAH1B2P68402 229 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 CX3CL1P78423 397 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 FXYD3Q14802 87 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 IQCJQ1A5X6 159 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 LBHQ53QV2 105 aaPredicted RBP9.22□□□□□ -0.93
VRK3-223ENST00000601341 FAM209BQ5JX69 171 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 C10orf113Q5VZT2 155 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 TMEM116Q8NCL8 245 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 SRSF12Q8WXF0 261 aaKnown RBP9.22□□□□□ -0.93
VRK3-223ENST00000601341 TRGV9Q99603 122 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 SLC25A2Q9BXI2 301 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 AURKAIP1Q9NWT8 199 aaPredicted RBP9.22□□□□□ -0.93
VRK3-223ENST00000601341 MOB4Q9Y3A3 225 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 TLN2Q9Y4G6 2542 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 A6NDX4 124 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 HLA-DRB1P01911 266 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 HNF1AP20823 631 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 CRYBB3P26998 211 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 PLP1P60201 277 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 RANP62826 216 aaKnown RBP9.22□□□□□ -0.93
VRK3-223ENST00000601341 SSBP2P81877 361 aaPredicted RBP9.22□□□□□ -0.93
VRK3-223ENST00000601341 Q0VG73 95 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 FAM231DQ6ZW35 169 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 TMEM219Q86XT9 240 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 IGF2BP2-AS1Q96M15 143 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 CHRDL1Q9BU40 450 aa9.22□□□□□ -0.93
VRK3-223ENST00000601341 FNDC4Q9H6D8 234 aaPredicted RBP9.22□□□□□ -0.93
VRK3-223ENST00000601341 IGKV1D-37A0A075B6S9 117 aa9.21□□□□□ -0.94
VRK3-223ENST00000601341 IGLC7A0M8Q6 106 aa9.21□□□□□ -0.94
VRK3-223ENST00000601341 M0QZK8 103 aa9.21□□□□□ -0.94
VRK3-223ENST00000601341 IER3P46695 156 aa9.21□□□□□ -0.94
VRK3-223ENST00000601341 SUMO1P63165 101 aaKnown RBP9.21□□□□□ -0.94
VRK3-223ENST00000601341 UBE2L3P68036 154 aaKnown RBP9.21□□□□□ -0.94
VRK3-223ENST00000601341 LY6EQ16553 131 aa9.21□□□□□ -0.94
VRK3-223ENST00000601341 CDPF1Q6NVV7 123 aa9.21□□□□□ -0.94
VRK3-223ENST00000601341 C5orf56Q8N8D9 126 aa9.21□□□□□ -0.94
VRK3-223ENST00000601341 ACANP16112 2415 aa9.21□□□□□ -0.94
VRK3-223ENST00000601341 NAV3Q8IVL0 2385 aa9.2□□□□□ -0.94
VRK3-223ENST00000601341 SMIM27A0A1W2PRY6 76 aa9.2□□□□□ -0.94
VRK3-223ENST00000601341 TEX22C9J3V5 150 aa9.2□□□□□ -0.94
VRK3-223ENST00000601341 DDTP30046 118 aa9.2□□□□□ -0.94
VRK3-223ENST00000601341 Q6YL49 198 aa9.2□□□□□ -0.94
VRK3-223ENST00000601341 OR5AU1Q8NGC0 362 aa9.2□□□□□ -0.94
VRK3-223ENST00000601341 OR2T6Q8NHC8 308 aa9.2□□□□□ -0.94
VRK3-223ENST00000601341 NPIPB3Q92617 1050 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms