RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 THAP8Q8NA92 274 aa12.8□□□□□ -0.36
CHMP2A-208ENST00000601220 SLC35E1Q96K37 410 aa12.8□□□□□ -0.36
CHMP2A-208ENST00000601220 TRGV9Q99603 122 aa12.8□□□□□ -0.36
CHMP2A-208ENST00000601220 RSL24D1Q9UHA3 163 aaKnown RBP12.8□□□□□ -0.36
CHMP2A-208ENST00000601220 PFDN2Q9UHV9 154 aa12.8□□□□□ -0.36
CHMP2A-208ENST00000601220 IGHV3OR16-12A0A075B7B8 117 aa12.79□□□□□ -0.36
CHMP2A-208ENST00000601220 PRSS29PA6NIE9 313 aa12.79□□□□□ -0.36
CHMP2A-208ENST00000601220 F6UB75 175 aa12.79□□□□□ -0.36
CHMP2A-208ENST00000601220 M0R2N4 97 aa12.79□□□□□ -0.36
CHMP2A-208ENST00000601220 SRPXP78539 464 aa12.79□□□□□ -0.36
CHMP2A-208ENST00000601220 OR2F1Q13607 317 aa12.79□□□□□ -0.36
CHMP2A-208ENST00000601220 FAM222AQ5U5X8 452 aa12.79□□□□□ -0.36
CHMP2A-208ENST00000601220 SPATA31B1PQ5VZV4 182 aa12.79□□□□□ -0.36
CHMP2A-208ENST00000601220 Q6ZR54 194 aa12.79□□□□□ -0.36
CHMP2A-208ENST00000601220 OR1S1Q8NH92 325 aa12.79□□□□□ -0.36
CHMP2A-208ENST00000601220 FAM210BQ96KR6 192 aa12.79□□□□□ -0.36
CHMP2A-208ENST00000601220 C20orf173Q96LM9 149 aa12.79□□□□□ -0.36
CHMP2A-208ENST00000601220 SLIRPQ9GZT3 109 aaKnown RBP12.79□□□□□ -0.36
CHMP2A-208ENST00000601220 MCUBQ9NWR8 336 aa12.79□□□□□ -0.36
CHMP2A-208ENST00000601220 A0A0J9YX75 114 aa12.78□□□□□ -0.36
CHMP2A-208ENST00000601220 A8MTW9 85 aa12.78□□□□□ -0.36
CHMP2A-208ENST00000601220 PRSS46E5RG02 174 aa12.78□□□□□ -0.36
CHMP2A-208ENST00000601220 ISLRO14498 428 aa12.78□□□□□ -0.36
CHMP2A-208ENST00000601220 TNFSF8P32971 234 aa12.78□□□□□ -0.36
CHMP2A-208ENST00000601220 PSG9Q00887 426 aa12.78□□□□□ -0.36
CHMP2A-208ENST00000601220 OXA1LQ15070 435 aa12.78□□□□□ -0.36
CHMP2A-208ENST00000601220 FAM78BQ5VT40 261 aa12.78□□□□□ -0.36
CHMP2A-208ENST00000601220 OR4B1Q8NGF8 309 aa12.78□□□□□ -0.36
CHMP2A-208ENST00000601220 RAB2BQ8WUD1 216 aa12.78□□□□□ -0.36
CHMP2A-208ENST00000601220 RYR1P21817 5038 aa12.78□□□□□ -0.36
CHMP2A-208ENST00000601220 DUXBA0A1W2PPF3 345 aa12.77□□□□□ -0.37
CHMP2A-208ENST00000601220 ANXA3P12429 323 aa12.77□□□□□ -0.37
CHMP2A-208ENST00000601220 TMBIM6P55061 237 aa12.77□□□□□ -0.37
CHMP2A-208ENST00000601220 AMTNQ6UX39 209 aa12.77□□□□□ -0.37
CHMP2A-208ENST00000601220 OR8I2Q8N0Y5 310 aa12.77□□□□□ -0.37
CHMP2A-208ENST00000601220 LRTM2Q8N967 370 aa12.77□□□□□ -0.37
CHMP2A-208ENST00000601220 COQ8AQ8NI60 647 aa12.77□□□□□ -0.37
CHMP2A-208ENST00000601220 NIPSNAP3BQ9BS92 247 aa12.77□□□□□ -0.37
CHMP2A-208ENST00000601220 FABP1P07148 127 aa12.76□□□□□ -0.37
CHMP2A-208ENST00000601220 MED14OSP0DP75 135 aa12.76□□□□□ -0.37
CHMP2A-208ENST00000601220 IAPPP10997 89 aa12.76□□□□□ -0.37
CHMP2A-208ENST00000601220 SLC25A6P12236 298 aa12.76□□□□□ -0.37
CHMP2A-208ENST00000601220 TMEM182Q6ZP80 229 aaPredicted RBP12.76□□□□□ -0.37
CHMP2A-208ENST00000601220 BCL7BQ9BQE9 202 aa12.76□□□□□ -0.37
CHMP2A-208ENST00000601220 TEX48A0A1B0GUV7 120 aa12.75□□□□□ -0.37
CHMP2A-208ENST00000601220 FABP12A6NFH5 140 aa12.75□□□□□ -0.37
CHMP2A-208ENST00000601220 TMEM128Q5BJH2 165 aa12.75□□□□□ -0.37
CHMP2A-208ENST00000601220 EBLN2Q6P2I7 272 aa12.75□□□□□ -0.37
CHMP2A-208ENST00000601220 TRIM63Q969Q1 353 aa12.75□□□□□ -0.37
CHMP2A-208ENST00000601220 SLC25A32Q9H2D1 315 aa12.75□□□□□ -0.37
CHMP2A-208ENST00000601220 GOLT1BQ9Y3E0 138 aa12.75□□□□□ -0.37
CHMP2A-208ENST00000601220 YTHDF2Q9Y5A9 579 aaKnown RBP12.75□□□□□ -0.37
CHMP2A-208ENST00000601220 ZNF98A6NK75 572 aa12.74□□□□□ -0.37
CHMP2A-208ENST00000601220 RAB11AP62491 216 aa12.74□□□□□ -0.37
CHMP2A-208ENST00000601220 SAMD13Q5VXD3 122 aa12.74□□□□□ -0.37
CHMP2A-208ENST00000601220 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.74□□□□□ -0.37
CHMP2A-208ENST00000601220 PPP1R14BQ96C90 147 aa12.74□□□□□ -0.37
CHMP2A-208ENST00000601220 RSG1Q9BU20 258 aa12.74□□□□□ -0.37
CHMP2A-208ENST00000601220 RPRMQ9NS64 109 aa12.74□□□□□ -0.37
CHMP2A-208ENST00000601220 DOK5Q9P104 306 aa12.74□□□□□ -0.37
CHMP2A-208ENST00000601220 SLC45A2Q9UMX9 530 aa12.74□□□□□ -0.37
CHMP2A-208ENST00000601220 LOC102723971A0A1B0GUV8 181 aa12.73□□□□□ -0.37
CHMP2A-208ENST00000601220 CFDP00746 253 aaPredicted RBP12.73□□□□□ -0.37
CHMP2A-208ENST00000601220 IFNA21P01568 189 aa12.73□□□□□ -0.37
CHMP2A-208ENST00000601220 HBE1P02100 147 aa12.73□□□□□ -0.37
CHMP2A-208ENST00000601220 GATA2P23769 480 aaPredicted RBP12.73□□□□□ -0.37
CHMP2A-208ENST00000601220 MEOX2P50222 304 aa12.73□□□□□ -0.37
CHMP2A-208ENST00000601220 RNF212Q495C1 297 aa12.73□□□□□ -0.37
CHMP2A-208ENST00000601220 GGNBP1Q5YKI7 109 aa12.73□□□□□ -0.37
CHMP2A-208ENST00000601220 TMED4Q7Z7H5 227 aa12.73□□□□□ -0.37
CHMP2A-208ENST00000601220 C16orf92Q96LL3 132 aa12.73□□□□□ -0.37
CHMP2A-208ENST00000601220 IGLV2-18A0A075B6J9 118 aa12.72□□□□□ -0.37
CHMP2A-208ENST00000601220 TRAV8-2A0A0B4J237 113 aa12.72□□□□□ -0.37
CHMP2A-208ENST00000601220 PIGBOS1A0A0B4J2F0 54 aa12.72□□□□□ -0.37
CHMP2A-208ENST00000601220 H3BMQ9 156 aa12.72□□□□□ -0.37
CHMP2A-208ENST00000601220 CRXO43186 299 aaPredicted RBP12.72□□□□□ -0.37
CHMP2A-208ENST00000601220 PRM2P04554 102 aa12.72□□□□□ -0.37
CHMP2A-208ENST00000601220 RRN3P1Q2M238 152 aa12.72□□□□□ -0.37
CHMP2A-208ENST00000601220 OR4D5Q8NGN0 318 aa12.72□□□□□ -0.37
CHMP2A-208ENST00000601220 IGF2BP2-AS1Q96M15 143 aa12.72□□□□□ -0.37
CHMP2A-208ENST00000601220 C7orf50Q9BRJ6 194 aaKnown RBP12.72□□□□□ -0.37
CHMP2A-208ENST00000601220 MAGT1Q9H0U3 335 aa12.72□□□□□ -0.37
CHMP2A-208ENST00000601220 SYNGR2O43760 224 aa12.71□□□□□ -0.37
CHMP2A-208ENST00000601220 MED6O75586 246 aa12.71□□□□□ -0.37
CHMP2A-208ENST00000601220 GALR1P47211 349 aa12.71□□□□□ -0.37
CHMP2A-208ENST00000601220 TMEM88Q6PEY1 159 aa12.71□□□□□ -0.37
CHMP2A-208ENST00000601220 SLC25A22Q9H936 323 aa12.71□□□□□ -0.37
CHMP2A-208ENST00000601220 PAIP2BQ9ULR5 123 aaKnown RBP12.71□□□□□ -0.37
CHMP2A-208ENST00000601220 TMED3Q9Y3Q3 217 aa12.71□□□□□ -0.37
CHMP2A-208ENST00000601220 V9GYH0 126 aa12.71□□□□□ -0.37
CHMP2A-208ENST00000601220 ABCA13Q86UQ4 5058 aa12.71□□□□□ -0.37
CHMP2A-208ENST00000601220 SFT2D2O95562 160 aa12.7□□□□□ -0.38
CHMP2A-208ENST00000601220 HTN3P15516 51 aa12.7□□□□□ -0.38
CHMP2A-208ENST00000601220 PPP1R1AQ13522 171 aa12.7□□□□□ -0.38
CHMP2A-208ENST00000601220 IGFL4Q6B9Z1 124 aa12.7□□□□□ -0.38
CHMP2A-208ENST00000601220 UBE2DNLQ8IWF7 75 aa12.7□□□□□ -0.38
CHMP2A-208ENST00000601220 OR11H7Q8NGC8 314 aa12.7□□□□□ -0.38
CHMP2A-208ENST00000601220 MCFD2Q8NI22 146 aa12.7□□□□□ -0.38
CHMP2A-208ENST00000601220 CIB3Q96Q77 187 aaPredicted RBP12.7□□□□□ -0.38
CHMP2A-208ENST00000601220 WRBO00258 174 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms