RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 IAPPP10997 89 aa12.17□□□□□ -0.46
SCAF1-204ENST00000601038 FXYD7P58549 80 aa12.17□□□□□ -0.46
SCAF1-204ENST00000601038 TOMM5Q8N4H5 51 aa12.17□□□□□ -0.46
SCAF1-204ENST00000601038 ZNF709Q8N972 641 aa12.17□□□□□ -0.46
SCAF1-204ENST00000601038 THAP8Q8NA92 274 aa12.17□□□□□ -0.46
SCAF1-204ENST00000601038 COQ8AQ8NI60 647 aa12.17□□□□□ -0.46
SCAF1-204ENST00000601038 TRIM63Q969Q1 353 aa12.17□□□□□ -0.46
SCAF1-204ENST00000601038 PPP1R14BQ96C90 147 aa12.17□□□□□ -0.46
SCAF1-204ENST00000601038 CIB3Q96Q77 187 aaPredicted RBP12.17□□□□□ -0.46
SCAF1-204ENST00000601038 CFDP00746 253 aaPredicted RBP12.16□□□□□ -0.46
SCAF1-204ENST00000601038 VAMP1P23763 118 aa12.16□□□□□ -0.46
SCAF1-204ENST00000601038 PAX9P55771 341 aa12.16□□□□□ -0.46
SCAF1-204ENST00000601038 RPP30P78346 268 aaKnown RBP12.16□□□□□ -0.46
SCAF1-204ENST00000601038 ZNF79Q15937 498 aa12.16□□□□□ -0.46
SCAF1-204ENST00000601038 PYDC2Q56P42 97 aa12.16□□□□□ -0.46
SCAF1-204ENST00000601038 SAMD13Q5VXD3 122 aa12.16□□□□□ -0.46
SCAF1-204ENST00000601038 GGNBP1Q5YKI7 109 aa12.16□□□□□ -0.46
SCAF1-204ENST00000601038 POM121L12Q8N7R1 296 aa12.16□□□□□ -0.46
SCAF1-204ENST00000601038 OR4B1Q8NGF8 309 aa12.16□□□□□ -0.46
SCAF1-204ENST00000601038 DEDD2Q8WXF8 326 aa12.16□□□□□ -0.46
SCAF1-204ENST00000601038 SLC25A21Q9BQT8 299 aaPredicted RBP12.16□□□□□ -0.46
SCAF1-204ENST00000601038 SCRT1Q9BWW7 348 aa12.16□□□□□ -0.46
SCAF1-204ENST00000601038 PAIP2BQ9ULR5 123 aaKnown RBP12.16□□□□□ -0.46
SCAF1-204ENST00000601038 TMED3Q9Y3Q3 217 aa12.16□□□□□ -0.46
SCAF1-204ENST00000601038 IGHV3OR16-12A0A075B7B8 117 aa12.15□□□□□ -0.46
SCAF1-204ENST00000601038 EMP1P54849 157 aa12.15□□□□□ -0.46
SCAF1-204ENST00000601038 PSG9Q00887 426 aa12.15□□□□□ -0.46
SCAF1-204ENST00000601038 EBLN2Q6P2I7 272 aa12.15□□□□□ -0.46
SCAF1-204ENST00000601038 LINC00336Q6ZUF6 198 aa12.15□□□□□ -0.46
SCAF1-204ENST00000601038 KRTAP17-1Q9BYP8 105 aa12.15□□□□□ -0.46
SCAF1-204ENST00000601038 RFNGQ9Y644 331 aa12.15□□□□□ -0.46
SCAF1-204ENST00000601038 TEX48A0A1B0GUV7 120 aa12.14□□□□□ -0.47
SCAF1-204ENST00000601038 PRSS46E5RG02 174 aa12.14□□□□□ -0.47
SCAF1-204ENST00000601038 SYNGR2O43760 224 aa12.14□□□□□ -0.47
SCAF1-204ENST00000601038 SFT2D2O95562 160 aa12.14□□□□□ -0.47
SCAF1-204ENST00000601038 MEOX2P50222 304 aa12.14□□□□□ -0.47
SCAF1-204ENST00000601038 FAM78BQ5VT40 261 aa12.14□□□□□ -0.47
SCAF1-204ENST00000601038 SLC35B3Q9H1N7 401 aa12.14□□□□□ -0.47
SCAF1-204ENST00000601038 RPRMQ9NS64 109 aa12.14□□□□□ -0.47
SCAF1-204ENST00000601038 DKK2Q9UBU2 259 aa12.14□□□□□ -0.47
SCAF1-204ENST00000601038 SLC45A2Q9UMX9 530 aa12.14□□□□□ -0.47
SCAF1-204ENST00000601038 A0A0J9YX75 114 aa12.13□□□□□ -0.47
SCAF1-204ENST00000601038 F6UB75 175 aa12.13□□□□□ -0.47
SCAF1-204ENST00000601038 GALR1P47211 349 aa12.13□□□□□ -0.47
SCAF1-204ENST00000601038 PPP1R1AQ13522 171 aa12.13□□□□□ -0.47
SCAF1-204ENST00000601038 GSG1LQ6UXU4 331 aa12.13□□□□□ -0.47
SCAF1-204ENST00000601038 FAM210BQ96KR6 192 aa12.13□□□□□ -0.47
SCAF1-204ENST00000601038 MAGT1Q9H0U3 335 aa12.13□□□□□ -0.47
SCAF1-204ENST00000601038 GOLT1BQ9Y3E0 138 aa12.13□□□□□ -0.47
SCAF1-204ENST00000601038 V9GYH0 126 aa12.13□□□□□ -0.47
SCAF1-204ENST00000601038 ZNF98A6NK75 572 aa12.12□□□□□ -0.47
SCAF1-204ENST00000601038 WRBO00258 174 aa12.12□□□□□ -0.47
SCAF1-204ENST00000601038 FAM222AQ5U5X8 452 aa12.12□□□□□ -0.47
SCAF1-204ENST00000601038 C1orf158Q8N1D5 194 aa12.12□□□□□ -0.47
SCAF1-204ENST00000601038 OR4D5Q8NGN0 318 aa12.12□□□□□ -0.47
SCAF1-204ENST00000601038 C16orf92Q96LL3 132 aa12.12□□□□□ -0.47
SCAF1-204ENST00000601038 C20orf173Q96LM9 149 aa12.12□□□□□ -0.47
SCAF1-204ENST00000601038 NIPSNAP3BQ9BS92 247 aa12.12□□□□□ -0.47
SCAF1-204ENST00000601038 RSG1Q9BU20 258 aa12.12□□□□□ -0.47
SCAF1-204ENST00000601038 SLC25A32Q9H2D1 315 aa12.12□□□□□ -0.47
SCAF1-204ENST00000601038 VPS13DQ5THJ4 4388 aa12.11□□□□□ -0.47
SCAF1-204ENST00000601038 A8MTW9 85 aa12.11□□□□□ -0.47
SCAF1-204ENST00000601038 HBE1P02100 147 aa12.11□□□□□ -0.47
SCAF1-204ENST00000601038 HOXB5P09067 269 aa12.11□□□□□ -0.47
SCAF1-204ENST00000601038 S100A7P31151 101 aa12.11□□□□□ -0.47
SCAF1-204ENST00000601038 S100A5P33763 92 aa12.11□□□□□ -0.47
SCAF1-204ENST00000601038 OXA1LQ15070 435 aa12.11□□□□□ -0.47
SCAF1-204ENST00000601038 SPANXN5Q5MJ07 72 aa12.11□□□□□ -0.47
SCAF1-204ENST00000601038 BPIFCQ8NFQ6 507 aa12.11□□□□□ -0.47
SCAF1-204ENST00000601038 C17orf77Q96MU5 243 aa12.11□□□□□ -0.47
SCAF1-204ENST00000601038 C7orf50Q9BRJ6 194 aaKnown RBP12.11□□□□□ -0.47
SCAF1-204ENST00000601038 SLC25A22Q9H936 323 aa12.11□□□□□ -0.47
SCAF1-204ENST00000601038 DOK5Q9P104 306 aa12.11□□□□□ -0.47
SCAF1-204ENST00000601038 DNAH10Q8IVF4 4471 aa12.1□□□□□ -0.47
SCAF1-204ENST00000601038 ORM2P19652 201 aa12.1□□□□□ -0.47
SCAF1-204ENST00000601038 TMEM182Q6ZP80 229 aaPredicted RBP12.1□□□□□ -0.47
SCAF1-204ENST00000601038 OR1B1Q8NGR6 318 aa12.1□□□□□ -0.47
SCAF1-204ENST00000601038 GPR82Q96P67 336 aa12.1□□□□□ -0.47
SCAF1-204ENST00000601038 STRAPQ9Y3F4 350 aaKnown RBP12.1□□□□□ -0.47
SCAF1-204ENST00000601038 LOC102723971A0A1B0GUV8 181 aa12.09□□□□□ -0.47
SCAF1-204ENST00000601038 IFNA21P01568 189 aa12.09□□□□□ -0.47
SCAF1-204ENST00000601038 GATA2P23769 480 aaPredicted RBP12.09□□□□□ -0.47
SCAF1-204ENST00000601038 UBE2MP61081 183 aaKnown RBP12.09□□□□□ -0.47
SCAF1-204ENST00000601038 ID3Q02535 119 aa12.09□□□□□ -0.47
SCAF1-204ENST00000601038 AKR1C1Q04828 323 aa12.09□□□□□ -0.47
SCAF1-204ENST00000601038 RRN3P1Q2M238 152 aa12.09□□□□□ -0.47
SCAF1-204ENST00000601038 AMTNQ6UX39 209 aa12.09□□□□□ -0.47
SCAF1-204ENST00000601038 TMEM144Q7Z5S9 345 aa12.09□□□□□ -0.47
SCAF1-204ENST00000601038 TMEM147Q9BVK8 224 aa12.09□□□□□ -0.47
SCAF1-204ENST00000601038 PLA2G2EQ9NZK7 142 aa12.09□□□□□ -0.47
SCAF1-204ENST00000601038 YTHDF2Q9Y5A9 579 aaKnown RBP12.09□□□□□ -0.47
SCAF1-204ENST00000601038 A0A1B0GVY2 172 aa12.08□□□□□ -0.48
SCAF1-204ENST00000601038 LGALS9BQ3B8N2 356 aa12.08□□□□□ -0.48
SCAF1-204ENST00000601038 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.08□□□□□ -0.48
SCAF1-204ENST00000601038 ACOT7LQ6ZUV0 252 aa12.08□□□□□ -0.48
SCAF1-204ENST00000601038 CCDC190Q86UF4 302 aa12.08□□□□□ -0.48
SCAF1-204ENST00000601038 IGF2BP2-AS1Q96M15 143 aa12.08□□□□□ -0.48
SCAF1-204ENST00000601038 H3BP45 60 aa12.07□□□□□ -0.48
SCAF1-204ENST00000601038 M0R2N4 97 aa12.07□□□□□ -0.48
SCAF1-204ENST00000601038 DNAH6Q9C0G6 4158 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms