RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 SHPKQ9UHJ6 478 aa15.03■□□□□ -0
PNKP-212ENST00000599454 RABL2BQ9UNT1 228 aa15.03■□□□□ -0
PNKP-212ENST00000599454 IGKV1D-37A0A075B6S9 117 aa15.02■□□□□ -0
PNKP-212ENST00000599454 SNRPGP15A8MWD9 76 aa15.02■□□□□ -0
PNKP-212ENST00000599454 MEOX2P50222 304 aa15.02■□□□□ -0
PNKP-212ENST00000599454 FAM3BP58499 235 aaPredicted RBP15.02■□□□□ -0
PNKP-212ENST00000599454 LYZP61626 148 aa15.02■□□□□ -0
PNKP-212ENST00000599454 ZNF90Q03938 601 aa15.02■□□□□ -0
PNKP-212ENST00000599454 GAMTQ14353 236 aa15.02■□□□□ -0
PNKP-212ENST00000599454 RRN3P1Q2M238 152 aa15.02■□□□□ -0
PNKP-212ENST00000599454 OR8I2Q8N0Y5 310 aa15.02■□□□□ -0
PNKP-212ENST00000599454 YTHDF2Q9Y5A9 579 aaKnown RBP15.02■□□□□ -0
PNKP-212ENST00000599454 PIGBOS1A0A0B4J2F0 54 aa15.01□□□□□ -0.01
PNKP-212ENST00000599454 A0A0J9YX75 114 aa15.01□□□□□ -0.01
PNKP-212ENST00000599454 CTDSPLO15194 276 aa15.01□□□□□ -0.01
PNKP-212ENST00000599454 RGS5O15539 181 aa15.01□□□□□ -0.01
PNKP-212ENST00000599454 HTN3P15516 51 aa15.01□□□□□ -0.01
PNKP-212ENST00000599454 C1orf134Q5TEV5 83 aa15.01□□□□□ -0.01
PNKP-212ENST00000599454 FAM78BQ5VT40 261 aa15.01□□□□□ -0.01
PNKP-212ENST00000599454 C1orf158Q8N1D5 194 aa15.01□□□□□ -0.01
PNKP-212ENST00000599454 PPP1R14BQ96C90 147 aa15.01□□□□□ -0.01
PNKP-212ENST00000599454 RPRMQ9NS64 109 aa15.01□□□□□ -0.01
PNKP-212ENST00000599454 DAD1P61803 113 aa15□□□□□ -0.01
PNKP-212ENST00000599454 SRPXP78539 464 aa15□□□□□ -0.01
PNKP-212ENST00000599454 CLVS1Q8IUQ0 354 aaPredicted RBP15□□□□□ -0.01
PNKP-212ENST00000599454 C15orf53Q8NAA6 179 aa15□□□□□ -0.01
PNKP-212ENST00000599454 OR51S1Q8NGJ8 323 aa15□□□□□ -0.01
PNKP-212ENST00000599454 TRGV9Q99603 122 aa15□□□□□ -0.01
PNKP-212ENST00000599454 MAGT1Q9H0U3 335 aa15□□□□□ -0.01
PNKP-212ENST00000599454 SCP2D1Q9UJQ7 156 aa15□□□□□ -0.01
PNKP-212ENST00000599454 A8MTW9 85 aa14.99□□□□□ -0.01
PNKP-212ENST00000599454 CFDP00746 253 aaPredicted RBP14.99□□□□□ -0.01
PNKP-212ENST00000599454 ANXA3P12429 323 aa14.99□□□□□ -0.01
PNKP-212ENST00000599454 ALDH3B2P48448 385 aa14.99□□□□□ -0.01
PNKP-212ENST00000599454 TMEM88Q6PEY1 159 aa14.99□□□□□ -0.01
PNKP-212ENST00000599454 PLA2G2EQ9NZK7 142 aa14.99□□□□□ -0.01
PNKP-212ENST00000599454 DOK5Q9P104 306 aa14.99□□□□□ -0.01
PNKP-212ENST00000599454 F6UB75 175 aa14.98□□□□□ -0.01
PNKP-212ENST00000599454 AKR1C4P17516 323 aa14.98□□□□□ -0.01
PNKP-212ENST00000599454 GALR1P47211 349 aa14.98□□□□□ -0.01
PNKP-212ENST00000599454 RAB11AP62491 216 aa14.98□□□□□ -0.01
PNKP-212ENST00000599454 LYZL2Q7Z4W2 148 aa14.98□□□□□ -0.01
PNKP-212ENST00000599454 ZNF575Q86XF7 245 aa14.98□□□□□ -0.01
PNKP-212ENST00000599454 OR1S1Q8NH92 325 aa14.98□□□□□ -0.01
PNKP-212ENST00000599454 IGF2BP2-AS1Q96M15 143 aa14.98□□□□□ -0.01
PNKP-212ENST00000599454 PRR13Q9NZ81 148 aa14.98□□□□□ -0.01
PNKP-212ENST00000599454 SLC45A2Q9UMX9 530 aa14.98□□□□□ -0.01
PNKP-212ENST00000599454 TMED3Q9Y3Q3 217 aa14.98□□□□□ -0.01
PNKP-212ENST00000599454 CTDSP2O14595 271 aa14.97□□□□□ -0.01
PNKP-212ENST00000599454 OR2F1Q13607 317 aa14.97□□□□□ -0.01
PNKP-212ENST00000599454 IL18Q14116 193 aa14.97□□□□□ -0.01
PNKP-212ENST00000599454 GGNBP1Q5YKI7 109 aa14.97□□□□□ -0.01
PNKP-212ENST00000599454 C16orf92Q96LL3 132 aa14.97□□□□□ -0.01
PNKP-212ENST00000599454 TMEM208Q9BTX3 173 aa14.97□□□□□ -0.01
PNKP-212ENST00000599454 ANKRD20A5PA0PJZ0 165 aa14.96□□□□□ -0.01
PNKP-212ENST00000599454 GSG1LQ6UXU4 331 aa14.96□□□□□ -0.01
PNKP-212ENST00000599454 THAP8Q8NA92 274 aa14.96□□□□□ -0.01
PNKP-212ENST00000599454 DUXBA0A1W2PPF3 345 aa14.95□□□□□ -0.02
PNKP-212ENST00000599454 LYRM9A8MSI8 78 aa14.95□□□□□ -0.02
PNKP-212ENST00000599454 S100A7P31151 101 aa14.95□□□□□ -0.02
PNKP-212ENST00000599454 AMTNQ6UX39 209 aa14.95□□□□□ -0.02
PNKP-212ENST00000599454 OR4D5Q8NGN0 318 aa14.95□□□□□ -0.02
PNKP-212ENST00000599454 DIRAS2Q96HU8 199 aa14.95□□□□□ -0.02
PNKP-212ENST00000599454 C20orf173Q96LM9 149 aa14.95□□□□□ -0.02
PNKP-212ENST00000599454 B2MP61769 119 aa14.94□□□□□ -0.02
PNKP-212ENST00000599454 GPR82Q96P67 336 aa14.94□□□□□ -0.02
PNKP-212ENST00000599454 ATG101Q9BSB4 218 aa14.94□□□□□ -0.02
PNKP-212ENST00000599454 SLC25A32Q9H2D1 315 aa14.94□□□□□ -0.02
PNKP-212ENST00000599454 IGKV1OR2-108A0A075B7D4 117 aa14.93□□□□□ -0.02
PNKP-212ENST00000599454 PITX3O75364 302 aa14.93□□□□□ -0.02
PNKP-212ENST00000599454 DUSP14O95147 198 aaKnown RBP14.93□□□□□ -0.02
PNKP-212ENST00000599454 SMIM18P0DKX4 95 aa14.93□□□□□ -0.02
PNKP-212ENST00000599454 OR1B1Q8NGR6 318 aa14.93□□□□□ -0.02
PNKP-212ENST00000599454 RSG1Q9BU20 258 aa14.93□□□□□ -0.02
PNKP-212ENST00000599454 MCUBQ9NWR8 336 aa14.93□□□□□ -0.02
PNKP-212ENST00000599454 ABCA13Q86UQ4 5058 aa14.92□□□□□ -0.02
PNKP-212ENST00000599454 ZNF98A6NK75 572 aa14.92□□□□□ -0.02
PNKP-212ENST00000599454 MED6O75586 246 aa14.92□□□□□ -0.02
PNKP-212ENST00000599454 INSP01308 110 aa14.92□□□□□ -0.02
PNKP-212ENST00000599454 SLC25A6P12236 298 aa14.92□□□□□ -0.02
PNKP-212ENST00000599454 RPP30P78346 268 aaKnown RBP14.92□□□□□ -0.02
PNKP-212ENST00000599454 CIB3Q96Q77 187 aaPredicted RBP14.92□□□□□ -0.02
PNKP-212ENST00000599454 SLC25A22Q9H936 323 aa14.92□□□□□ -0.02
PNKP-212ENST00000599454 RSL24D1Q9UHA3 163 aaKnown RBP14.92□□□□□ -0.02
PNKP-212ENST00000599454 TSPOP30536 169 aa14.91□□□□□ -0.02
PNKP-212ENST00000599454 IAPPP10997 89 aa14.9□□□□□ -0.02
PNKP-212ENST00000599454 CNN1P51911 297 aaKnown RBP14.9□□□□□ -0.02
PNKP-212ENST00000599454 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.9□□□□□ -0.02
PNKP-212ENST00000599454 GPR141Q7Z602 305 aa14.9□□□□□ -0.02
PNKP-212ENST00000599454 BPIFCQ8NFQ6 507 aa14.9□□□□□ -0.02
PNKP-212ENST00000599454 OR11H7Q8NGC8 314 aa14.9□□□□□ -0.02
PNKP-212ENST00000599454 PAIP2BQ9ULR5 123 aaKnown RBP14.9□□□□□ -0.02
PNKP-212ENST00000599454 CRXO43186 299 aaPredicted RBP14.89□□□□□ -0.03
PNKP-212ENST00000599454 CDK2AP2O75956 126 aa14.89□□□□□ -0.03
PNKP-212ENST00000599454 SPCS2Q15005 226 aa14.89□□□□□ -0.03
PNKP-212ENST00000599454 SPINK13Q1W4C9 94 aa14.89□□□□□ -0.03
PNKP-212ENST00000599454 LRTM2Q8N967 370 aa14.89□□□□□ -0.03
PNKP-212ENST00000599454 C17orf77Q96MU5 243 aa14.89□□□□□ -0.03
PNKP-212ENST00000599454 TMEM147Q9BVK8 224 aa14.89□□□□□ -0.03
PNKP-212ENST00000599454 KRTAP4-5Q9BYR2 181 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms