RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 A8MZ25 164 aa15.21■□□□□ 0.03
PNKP-211ENST00000598020 CD7P09564 240 aa15.21■□□□□ 0.03
PNKP-211ENST00000598020 LINC00869P0C866 280 aa15.21■□□□□ 0.03
PNKP-211ENST00000598020 S100A7P31151 101 aa15.21■□□□□ 0.03
PNKP-211ENST00000598020 CAMLGP49069 296 aa15.21■□□□□ 0.03
PNKP-211ENST00000598020 CD81P60033 236 aa15.21■□□□□ 0.03
PNKP-211ENST00000598020 Q5BKY6 102 aa15.21■□□□□ 0.03
PNKP-211ENST00000598020 DEFB121Q5J5C9 76 aa15.21■□□□□ 0.03
PNKP-211ENST00000598020 UBE2L5PA0A1B0GUS4 154 aa15.2■□□□□ 0.02
PNKP-211ENST00000598020 ORM2P19652 201 aa15.2■□□□□ 0.02
PNKP-211ENST00000598020 AP2S1P53680 142 aaPredicted RBP15.2■□□□□ 0.02
PNKP-211ENST00000598020 PAFAH1B2P68402 229 aa15.2■□□□□ 0.02
PNKP-211ENST00000598020 OR2T35Q8NGX2 323 aa15.2■□□□□ 0.02
PNKP-211ENST00000598020 FAM110AQ9BQ89 295 aa15.2■□□□□ 0.02
PNKP-211ENST00000598020 GGTLC1Q9BX51 225 aa15.2■□□□□ 0.02
PNKP-211ENST00000598020 C19orf73Q9NVV2 129 aa15.2■□□□□ 0.02
PNKP-211ENST00000598020 HYPMO75409 117 aa15.19■□□□□ 0.02
PNKP-211ENST00000598020 RPL29P47914 159 aaKnown RBP15.19■□□□□ 0.02
PNKP-211ENST00000598020 PRR20EP86478 221 aa15.19■□□□□ 0.02
PNKP-211ENST00000598020 PRR20CP86479 221 aa15.19■□□□□ 0.02
PNKP-211ENST00000598020 PRR20DP86480 221 aa15.19■□□□□ 0.02
PNKP-211ENST00000598020 PRR20BP86481 221 aa15.19■□□□□ 0.02
PNKP-211ENST00000598020 PRR20AP86496 221 aa15.19■□□□□ 0.02
PNKP-211ENST00000598020 CLINT1Q14677 625 aa15.19■□□□□ 0.02
PNKP-211ENST00000598020 OPCMLQ14982 345 aa15.19■□□□□ 0.02
PNKP-211ENST00000598020 OR1B1Q8NGR6 318 aa15.19■□□□□ 0.02
PNKP-211ENST00000598020 AQP10Q96PS8 301 aa15.19■□□□□ 0.02
PNKP-211ENST00000598020 ATP5SQ99766 215 aa15.19■□□□□ 0.02
PNKP-211ENST00000598020 MS4A6AQ9H2W1 248 aa15.19■□□□□ 0.02
PNKP-211ENST00000598020 FBXL17Q9UF56 701 aa15.19■□□□□ 0.02
PNKP-211ENST00000598020 PRKDCP78527 4128 aaKnown RBP15.19■□□□□ 0.02
PNKP-211ENST00000598020 G3V3Q6 166 aa15.18■□□□□ 0.02
PNKP-211ENST00000598020 FGF7P21781 194 aa15.18■□□□□ 0.02
PNKP-211ENST00000598020 S100A7AQ86SG5 101 aa15.18■□□□□ 0.02
PNKP-211ENST00000598020 HIGD1AQ9Y241 93 aa15.18■□□□□ 0.02
PNKP-211ENST00000598020 ZNF98A6NK75 572 aa15.17■□□□□ 0.02
PNKP-211ENST00000598020 CMC4P56277 68 aaPredicted RBP15.17■□□□□ 0.02
PNKP-211ENST00000598020 RPL11P62913 178 aaKnown RBP15.17■□□□□ 0.02
PNKP-211ENST00000598020 PATE2Q6UY27 113 aa15.17■□□□□ 0.02
PNKP-211ENST00000598020 SIGLEC15Q6ZMC9 328 aa15.17■□□□□ 0.02
PNKP-211ENST00000598020 PPP1R14BQ96C90 147 aa15.17■□□□□ 0.02
PNKP-211ENST00000598020 SHANK2-AS3Q9BTD1 123 aa15.17■□□□□ 0.02
PNKP-211ENST00000598020 NPCDR1Q9BY65 106 aa15.17■□□□□ 0.02
PNKP-211ENST00000598020 WDR61Q9GZS3 305 aaKnown RBP15.17■□□□□ 0.02
PNKP-211ENST00000598020 OR11H12B2RN74 326 aa15.16■□□□□ 0.02
PNKP-211ENST00000598020 H3BRN7 92 aa15.16■□□□□ 0.02
PNKP-211ENST00000598020 IGHV4-30-4P0DP06 118 aa15.16■□□□□ 0.02
PNKP-211ENST00000598020 MIC13Q5XKP0 118 aa15.16■□□□□ 0.02
PNKP-211ENST00000598020 GBGT1Q8N5D6 347 aa15.16■□□□□ 0.02
PNKP-211ENST00000598020 PARD6GQ9BYG4 376 aaPredicted RBP15.16■□□□□ 0.02
PNKP-211ENST00000598020 SLC25A39Q9BZJ4 359 aaPredicted RBP15.16■□□□□ 0.02
PNKP-211ENST00000598020 ARL6Q9H0F7 186 aa15.16■□□□□ 0.02
PNKP-211ENST00000598020 DOK5Q9P104 306 aa15.16■□□□□ 0.02
PNKP-211ENST00000598020 IGKV3-7A0A075B6H7 116 aa15.15■□□□□ 0.02
PNKP-211ENST00000598020 ELOA3CA0A087WX78 387 aaPredicted RBP15.15■□□□□ 0.02
PNKP-211ENST00000598020 K7EQG2 157 aa15.15■□□□□ 0.02
PNKP-211ENST00000598020 DNASE2O00115 360 aaPredicted RBP15.15■□□□□ 0.02
PNKP-211ENST00000598020 OR5G3P0C626 314 aa15.15■□□□□ 0.02
PNKP-211ENST00000598020 ODF3L2Q3SX64 289 aa15.15■□□□□ 0.02
PNKP-211ENST00000598020 Q6ZRG5 221 aa15.15■□□□□ 0.02
PNKP-211ENST00000598020 OR8I2Q8N0Y5 310 aa15.15■□□□□ 0.02
PNKP-211ENST00000598020 DCANP1Q8TF63 244 aa15.15■□□□□ 0.02
PNKP-211ENST00000598020 B9D2Q9BPU9 175 aa15.15■□□□□ 0.02
PNKP-211ENST00000598020 ARV1Q9H2C2 271 aa15.15■□□□□ 0.02
PNKP-211ENST00000598020 SLC39A9Q9NUM3 307 aa15.15■□□□□ 0.02
PNKP-211ENST00000598020 TNFSF18Q9UNG2 199 aa15.15■□□□□ 0.02
PNKP-211ENST00000598020 RNF24Q9Y225 148 aa15.15■□□□□ 0.02
PNKP-211ENST00000598020 TFPI2P48307 235 aa15.14■□□□□ 0.01
PNKP-211ENST00000598020 B2MP61769 119 aa15.14■□□□□ 0.01
PNKP-211ENST00000598020 INO80EQ8NBZ0 244 aaPredicted RBP15.14■□□□□ 0.01
PNKP-211ENST00000598020 STXBP6Q8NFX7 210 aa15.14■□□□□ 0.01
PNKP-211ENST00000598020 TMEM37Q8WXS4 190 aa15.14■□□□□ 0.01
PNKP-211ENST00000598020 GPR82Q96P67 336 aa15.14■□□□□ 0.01
PNKP-211ENST00000598020 SMIM3Q9BZL3 60 aa15.14■□□□□ 0.01
PNKP-211ENST00000598020 WFDC1Q9HC57 220 aa15.14■□□□□ 0.01
PNKP-211ENST00000598020 SEPSECSQ9HD40 501 aaKnown RBP15.14■□□□□ 0.01
PNKP-211ENST00000598020 NRN1Q9NPD7 142 aa15.14■□□□□ 0.01
PNKP-211ENST00000598020 PXMP4Q9Y6I8 212 aa15.14■□□□□ 0.01
PNKP-211ENST00000598020 FXYD6-FXYD2A0A087WZ82 144 aa15.13■□□□□ 0.01
PNKP-211ENST00000598020 IFNA5P01569 189 aa15.13■□□□□ 0.01
PNKP-211ENST00000598020 DEFB125Q8N687 156 aa15.13■□□□□ 0.01
PNKP-211ENST00000598020 OR1L4Q8NGR5 311 aa15.13■□□□□ 0.01
PNKP-211ENST00000598020 DNAJC4Q9NNZ3 241 aa15.13■□□□□ 0.01
PNKP-211ENST00000598020 KCNIP2Q9NS61 270 aa15.13■□□□□ 0.01
PNKP-211ENST00000598020 RNF222A6NCQ9 220 aa15.12■□□□□ 0.01
PNKP-211ENST00000598020 COX7A2P2O60397 106 aa15.12■□□□□ 0.01
PNKP-211ENST00000598020 FRMD6-AS1P0C7T7 363 aa15.12■□□□□ 0.01
PNKP-211ENST00000598020 C10orf113Q5VZT2 155 aa15.12■□□□□ 0.01
PNKP-211ENST00000598020 WFDC3Q8IUB2 231 aa15.12■□□□□ 0.01
PNKP-211ENST00000598020 UHRF2Q96PU4 802 aa15.12■□□□□ 0.01
PNKP-211ENST00000598020 PFDN5Q99471 154 aa15.12■□□□□ 0.01
PNKP-211ENST00000598020 SCRT1Q9BWW7 348 aa15.12■□□□□ 0.01
PNKP-211ENST00000598020 WFDC10AQ9H1F0 79 aa15.12■□□□□ 0.01
PNKP-211ENST00000598020 SLC25A32Q9H2D1 315 aa15.12■□□□□ 0.01
PNKP-211ENST00000598020 TUBA4BQ9H853 241 aa15.12■□□□□ 0.01
PNKP-211ENST00000598020 C17orf112F2Z3M2 114 aa15.11■□□□□ 0.01
PNKP-211ENST00000598020 GALR1P47211 349 aa15.11■□□□□ 0.01
PNKP-211ENST00000598020 LINC00322Q6ZN03 302 aaPredicted RBP15.11■□□□□ 0.01
PNKP-211ENST00000598020 LINC00305Q7Z4B0 112 aa15.11■□□□□ 0.01
PNKP-211ENST00000598020 ZNF709Q8N972 641 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms