RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 NKX2-1P43699 371 aaPredicted RBP12.24□□□□□ -0.45
PNKP-210ENST00000597965 DHODHQ02127 395 aa12.24□□□□□ -0.45
PNKP-210ENST00000597965 TMED4Q7Z7H5 227 aa12.24□□□□□ -0.45
PNKP-210ENST00000597965 SCGB3A2Q96PL1 93 aa12.24□□□□□ -0.45
PNKP-210ENST00000597965 XCL2Q9UBD3 114 aa12.24□□□□□ -0.45
PNKP-210ENST00000597965 DNAH6Q9C0G6 4158 aa12.24□□□□□ -0.45
PNKP-210ENST00000597965 TEX13DA0A0J9YY54 714 aaPredicted RBP12.23□□□□□ -0.45
PNKP-210ENST00000597965 PRSS29PA6NIE9 313 aa12.23□□□□□ -0.45
PNKP-210ENST00000597965 CEBPZOSA8MTT3 80 aa12.23□□□□□ -0.45
PNKP-210ENST00000597965 H3BMM0 161 aa12.23□□□□□ -0.45
PNKP-210ENST00000597965 BUB3O43684 328 aa12.23□□□□□ -0.45
PNKP-210ENST00000597965 TOMM40O96008 361 aa12.23□□□□□ -0.45
PNKP-210ENST00000597965 IFNA10P01566 189 aa12.23□□□□□ -0.45
PNKP-210ENST00000597965 HLA-DRB4P13762 266 aa12.23□□□□□ -0.45
PNKP-210ENST00000597965 SURF2Q15527 256 aaPredicted RBP12.23□□□□□ -0.45
PNKP-210ENST00000597965 LGALS9BQ3B8N2 356 aa12.23□□□□□ -0.45
PNKP-210ENST00000597965 C4orf46Q504U0 113 aa12.23□□□□□ -0.45
PNKP-210ENST00000597965 RTBDNQ9BSG5 229 aaPredicted RBP12.23□□□□□ -0.45
PNKP-210ENST00000597965 CELA1Q9UNI1 258 aa12.23□□□□□ -0.45
PNKP-210ENST00000597965 HLA-DRB4X5D2U9 266 aa12.23□□□□□ -0.45
PNKP-210ENST00000597965 A0A0G2JRQ6 117 aa12.22□□□□□ -0.45
PNKP-210ENST00000597965 OR5AC1P0C628 307 aa12.22□□□□□ -0.45
PNKP-210ENST00000597965 ID1P41134 155 aa12.22□□□□□ -0.45
PNKP-210ENST00000597965 USF2Q15853 346 aaPredicted RBP12.22□□□□□ -0.45
PNKP-210ENST00000597965 ZFP69Q49AA0 526 aa12.22□□□□□ -0.45
PNKP-210ENST00000597965 SOHLH1Q5JUK2 328 aa12.22□□□□□ -0.45
PNKP-210ENST00000597965 Q6ZRM9 215 aa12.22□□□□□ -0.45
PNKP-210ENST00000597965 A0A1B0GVY2 172 aa12.21□□□□□ -0.45
PNKP-210ENST00000597965 C9orf170A2RU37 121 aa12.21□□□□□ -0.45
PNKP-210ENST00000597965 ANXA3P12429 323 aa12.21□□□□□ -0.45
PNKP-210ENST00000597965 UBE2MP61081 183 aaKnown RBP12.21□□□□□ -0.45
PNKP-210ENST00000597965 PPP1R1AQ13522 171 aa12.21□□□□□ -0.45
PNKP-210ENST00000597965 SAMD13Q5VXD3 122 aa12.21□□□□□ -0.45
PNKP-210ENST00000597965 SPATA31B1PQ5VZV4 182 aa12.21□□□□□ -0.45
PNKP-210ENST00000597965 ZNF705AQ6ZN79 300 aaPredicted RBP12.21□□□□□ -0.45
PNKP-210ENST00000597965 ZNF767PQ75MW2 155 aa12.21□□□□□ -0.45
PNKP-210ENST00000597965 UBE2DNLQ8IWF7 75 aa12.21□□□□□ -0.45
PNKP-210ENST00000597965 C12orf45Q8N5I9 185 aaPredicted RBP12.21□□□□□ -0.45
PNKP-210ENST00000597965 OR51G1Q8NGK1 321 aa12.21□□□□□ -0.45
PNKP-210ENST00000597965 GLYATL2Q8WU03 294 aa12.21□□□□□ -0.45
PNKP-210ENST00000597965 NAA60Q9H7X0 242 aa12.21□□□□□ -0.45
PNKP-210ENST00000597965 MGAT4CQ9UBM8 478 aa12.21□□□□□ -0.45
PNKP-210ENST00000597965 CACNG5Q9UF02 275 aa12.21□□□□□ -0.45
PNKP-210ENST00000597965 U3KQ87 197 aa12.21□□□□□ -0.45
PNKP-210ENST00000597965 C1QBP02746 253 aa12.2□□□□□ -0.46
PNKP-210ENST00000597965 FABP1P07148 127 aa12.2□□□□□ -0.46
PNKP-210ENST00000597965 NKX2-5P52952 324 aaPredicted RBP12.2□□□□□ -0.46
PNKP-210ENST00000597965 ATP5IP56385 69 aaPredicted RBP12.2□□□□□ -0.46
PNKP-210ENST00000597965 OR8G2PQ6IF36 304 aa12.2□□□□□ -0.46
PNKP-210ENST00000597965 NPIPB3Q92617 1050 aa12.2□□□□□ -0.46
PNKP-210ENST00000597965 ACY3Q96HD9 319 aa12.2□□□□□ -0.46
PNKP-210ENST00000597965 CLUHP3Q96NS8 147 aa12.2□□□□□ -0.46
PNKP-210ENST00000597965 KCNIP3Q9Y2W7 256 aa12.2□□□□□ -0.46
PNKP-210ENST00000597965 RFNGQ9Y644 331 aa12.2□□□□□ -0.46
PNKP-210ENST00000597965 PIGBOS1A0A0B4J2F0 54 aa12.19□□□□□ -0.46
PNKP-210ENST00000597965 ZNF705FA8MVS1 300 aaPredicted RBP12.19□□□□□ -0.46
PNKP-210ENST00000597965 SMLR1H3BR10 107 aa12.19□□□□□ -0.46
PNKP-210ENST00000597965 ZNF705DP0CH99 300 aaPredicted RBP12.19□□□□□ -0.46
PNKP-210ENST00000597965 ZNF705BP0CI00 300 aaPredicted RBP12.19□□□□□ -0.46
PNKP-210ENST00000597965 AKR1C4P17516 323 aa12.19□□□□□ -0.46
PNKP-210ENST00000597965 TMEM128Q5BJH2 165 aa12.19□□□□□ -0.46
PNKP-210ENST00000597965 TMEM268Q5VZI3 342 aa12.19□□□□□ -0.46
PNKP-210ENST00000597965 FOXI2Q6ZQN5 318 aa12.19□□□□□ -0.46
PNKP-210ENST00000597965 SELENOHQ8IZQ5 122 aaKnown RBP12.19□□□□□ -0.46
PNKP-210ENST00000597965 MITD1Q8WV92 249 aa12.19□□□□□ -0.46
PNKP-210ENST00000597965 RNF125Q96EQ8 232 aa12.19□□□□□ -0.46
PNKP-210ENST00000597965 KIAA1109Q2LD37 5005 aa12.18□□□□□ -0.46
PNKP-210ENST00000597965 SFT2D2O95562 160 aa12.18□□□□□ -0.46
PNKP-210ENST00000597965 GIPP09681 153 aaPredicted RBP12.18□□□□□ -0.46
PNKP-210ENST00000597965 PSG1P11464 419 aa12.18□□□□□ -0.46
PNKP-210ENST00000597965 PSMB3P49720 205 aa12.18□□□□□ -0.46
PNKP-210ENST00000597965 RNF212Q495C1 297 aa12.18□□□□□ -0.46
PNKP-210ENST00000597965 C1orf194Q5T5A4 169 aa12.18□□□□□ -0.46
PNKP-210ENST00000597965 COQ8AQ8NI60 647 aa12.18□□□□□ -0.46
PNKP-210ENST00000597965 IL22RA2Q969J5 263 aa12.18□□□□□ -0.46
PNKP-210ENST00000597965 SAV1Q9H4B6 383 aaPredicted RBP12.18□□□□□ -0.46
PNKP-210ENST00000597965 TMEM56-RWDD3S4R434 201 aa12.18□□□□□ -0.46
PNKP-210ENST00000597965 A0A0B4J2A0 478 aa12.17□□□□□ -0.46
PNKP-210ENST00000597965 M0R2N4 97 aa12.17□□□□□ -0.46
PNKP-210ENST00000597965 EMP1P54849 157 aa12.17□□□□□ -0.46
PNKP-210ENST00000597965 SUPT4H1P63272 117 aaKnown RBP12.17□□□□□ -0.46
PNKP-210ENST00000597965 NMSQ5H8A3 153 aa12.17□□□□□ -0.46
PNKP-210ENST00000597965 GPR146Q96CH1 333 aa12.17□□□□□ -0.46
PNKP-210ENST00000597965 NIPSNAP3BQ9BS92 247 aa12.17□□□□□ -0.46
PNKP-210ENST00000597965 SHPKQ9UHJ6 478 aa12.17□□□□□ -0.46
PNKP-210ENST00000597965 GOLT1BQ9Y3E0 138 aa12.17□□□□□ -0.46
PNKP-210ENST00000597965 IGHV3OR16-12A0A075B7B8 117 aa12.16□□□□□ -0.46
PNKP-210ENST00000597965 CRYM-AS1A6NIL9 109 aa12.16□□□□□ -0.46
PNKP-210ENST00000597965 ZFP92A6NM28 416 aa12.16□□□□□ -0.46
PNKP-210ENST00000597965 GOSR2O14653 212 aa12.16□□□□□ -0.46
PNKP-210ENST00000597965 RTL8CO15255 209 aa12.16□□□□□ -0.46
PNKP-210ENST00000597965 SIX6O95475 246 aa12.16□□□□□ -0.46
PNKP-210ENST00000597965 RAP2BP61225 183 aa12.16□□□□□ -0.46
PNKP-210ENST00000597965 EBLN2Q6P2I7 272 aa12.16□□□□□ -0.46
PNKP-210ENST00000597965 LGI3Q8N145 548 aa12.16□□□□□ -0.46
PNKP-210ENST00000597965 LHFPL5Q8TAF8 219 aa12.16□□□□□ -0.46
PNKP-210ENST00000597965 LINC00052Q96N35 136 aa12.16□□□□□ -0.46
PNKP-210ENST00000597965 PBDC1Q9BVG4 233 aa12.16□□□□□ -0.46
PNKP-210ENST00000597965 PCLOQ9Y6V0 5065 aa12.16□□□□□ -0.46
PNKP-210ENST00000597965 G3V3Q6 166 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms