RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 OR1B1Q8NGR6 318 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 THAP6Q8TBB0 222 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 GLMPQ8WWB7 406 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 WFDC10AQ9H1F0 79 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 UBQLN2Q9UHD9 624 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 S100A7P31151 101 aa14.69□□□□□ -0.06
SHKBP1-214ENST00000597396 DEFB125Q8N687 156 aa14.69□□□□□ -0.06
SHKBP1-214ENST00000597396 OR5C1Q8NGR4 320 aa14.69□□□□□ -0.06
SHKBP1-214ENST00000597396 MS4A6AQ9H2W1 248 aa14.69□□□□□ -0.06
SHKBP1-214ENST00000597396 DOK5Q9P104 306 aa14.69□□□□□ -0.06
SHKBP1-214ENST00000597396 A8MZ25 164 aa14.68□□□□□ -0.06
SHKBP1-214ENST00000597396 GIPP09681 153 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-214ENST00000597396 AP2S1P53680 142 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-214ENST00000597396 RAP2BP61225 183 aa14.68□□□□□ -0.06
SHKBP1-214ENST00000597396 VWC2Q2TAL6 325 aa14.68□□□□□ -0.06
SHKBP1-214ENST00000597396 SIGLEC15Q6ZMC9 328 aa14.68□□□□□ -0.06
SHKBP1-214ENST00000597396 MGST2Q99735 147 aa14.68□□□□□ -0.06
SHKBP1-214ENST00000597396 SRD5A3Q9H8P0 318 aa14.68□□□□□ -0.06
SHKBP1-214ENST00000597396 C19orf73Q9NVV2 129 aa14.68□□□□□ -0.06
SHKBP1-214ENST00000597396 SLC45A2Q9UMX9 530 aa14.68□□□□□ -0.06
SHKBP1-214ENST00000597396 WDR83OSQ9Y284 106 aa14.68□□□□□ -0.06
SHKBP1-214ENST00000597396 TRAV2A0A0B4J234 112 aa14.67□□□□□ -0.06
SHKBP1-214ENST00000597396 OR5G3P0C626 314 aa14.67□□□□□ -0.06
SHKBP1-214ENST00000597396 CAMLGP49069 296 aa14.67□□□□□ -0.06
SHKBP1-214ENST00000597396 CMC4P56277 68 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-214ENST00000597396 CLINT1Q14677 625 aa14.67□□□□□ -0.06
SHKBP1-214ENST00000597396 ASB13Q8WXK3 278 aa14.67□□□□□ -0.06
SHKBP1-214ENST00000597396 ASCL2Q99929 193 aa14.67□□□□□ -0.06
SHKBP1-214ENST00000597396 ARL6Q9H0F7 186 aa14.67□□□□□ -0.06
SHKBP1-214ENST00000597396 FBXL17Q9UF56 701 aa14.67□□□□□ -0.06
SHKBP1-214ENST00000597396 HIGD1AQ9Y241 93 aa14.67□□□□□ -0.06
SHKBP1-214ENST00000597396 HYPMO75409 117 aa14.66□□□□□ -0.06
SHKBP1-214ENST00000597396 FGF7P21781 194 aa14.66□□□□□ -0.06
SHKBP1-214ENST00000597396 RPL12P30050 165 aaKnown RBP14.66□□□□□ -0.06
SHKBP1-214ENST00000597396 PLP1P60201 277 aa14.66□□□□□ -0.06
SHKBP1-214ENST00000597396 FGL1Q08830 312 aa14.66□□□□□ -0.06
SHKBP1-214ENST00000597396 ODF3L2Q3SX64 289 aa14.66□□□□□ -0.06
SHKBP1-214ENST00000597396 C1orf194Q5T5A4 169 aa14.66□□□□□ -0.06
SHKBP1-214ENST00000597396 OR8I2Q8N0Y5 310 aa14.66□□□□□ -0.06
SHKBP1-214ENST00000597396 STPG3Q8N7X2 389 aa14.66□□□□□ -0.06
SHKBP1-214ENST00000597396 HSPB11Q9Y547 144 aa14.66□□□□□ -0.06
SHKBP1-214ENST00000597396 LYL1P12980 280 aa14.65□□□□□ -0.06
SHKBP1-214ENST00000597396 S100A7AQ86SG5 101 aa14.65□□□□□ -0.06
SHKBP1-214ENST00000597396 FAM110AQ9BQ89 295 aa14.65□□□□□ -0.06
SHKBP1-214ENST00000597396 GGTLC1Q9BX51 225 aa14.65□□□□□ -0.06
SHKBP1-214ENST00000597396 SLC25A22Q9H936 323 aa14.65□□□□□ -0.06
SHKBP1-214ENST00000597396 ZNF98A6NK75 572 aa14.64□□□□□ -0.07
SHKBP1-214ENST00000597396 K7EQG2 157 aa14.64□□□□□ -0.07
SHKBP1-214ENST00000597396 MPDU1O75352 247 aa14.64□□□□□ -0.07
SHKBP1-214ENST00000597396 PXDC1Q5TGL8 231 aa14.64□□□□□ -0.07
SHKBP1-214ENST00000597396 MAP6D1Q9H9H5 199 aa14.64□□□□□ -0.07
SHKBP1-214ENST00000597396 H3BRN7 92 aa14.63□□□□□ -0.07
SHKBP1-214ENST00000597396 COX7A2P2O60397 106 aa14.63□□□□□ -0.07
SHKBP1-214ENST00000597396 OPCMLQ14982 345 aa14.63□□□□□ -0.07
SHKBP1-214ENST00000597396 MIC13Q5XKP0 118 aa14.63□□□□□ -0.07
SHKBP1-214ENST00000597396 Q6ZRG5 221 aa14.63□□□□□ -0.07
SHKBP1-214ENST00000597396 SBSPONQ8IVN8 264 aa14.63□□□□□ -0.07
SHKBP1-214ENST00000597396 SCRT1Q9BWW7 348 aa14.63□□□□□ -0.07
SHKBP1-214ENST00000597396 SLC25A39Q9BZJ4 359 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-214ENST00000597396 SMIM3Q9BZL3 60 aa14.63□□□□□ -0.07
SHKBP1-214ENST00000597396 ARV1Q9H2C2 271 aa14.63□□□□□ -0.07
SHKBP1-214ENST00000597396 NRN1Q9NPD7 142 aa14.63□□□□□ -0.07
SHKBP1-214ENST00000597396 GALR1P47211 349 aa14.62□□□□□ -0.07
SHKBP1-214ENST00000597396 DCANP1Q8TF63 244 aa14.62□□□□□ -0.07
SHKBP1-214ENST00000597396 UHRF2Q96PU4 802 aa14.62□□□□□ -0.07
SHKBP1-214ENST00000597396 ATP5SQ99766 215 aa14.62□□□□□ -0.07
SHKBP1-214ENST00000597396 SHANK2-AS3Q9BTD1 123 aa14.62□□□□□ -0.07
SHKBP1-214ENST00000597396 SLC25A32Q9H2D1 315 aa14.62□□□□□ -0.07
SHKBP1-214ENST00000597396 RBMY1BA6NDE4 496 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 RBMY1EA6NEQ0 496 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 RBMY1DP0C7P1 496 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 ZNF688P0C7X2 276 aa14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 NHLRC4P0CG21 123 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 RPL29P47914 159 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 DEFB131AP59861 70 aa14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 B2MP61769 119 aa14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 LEMD1Q68G75 181 aa14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 APRG1Q8IVJ8 170 aa14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 FAM24BQ8N5W8 94 aa14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 OR2T35Q8NGX2 323 aa14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 GPR82Q96P67 336 aa14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 CITED4Q96RK1 184 aa14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 NPCDR1Q9BY65 106 aa14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 RNF24Q9Y225 148 aa14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 PXMP4Q9Y6I8 212 aa14.61□□□□□ -0.07
SHKBP1-214ENST00000597396 IFNA5P01569 189 aa14.6□□□□□ -0.07
SHKBP1-214ENST00000597396 PRR20EP86478 221 aa14.6□□□□□ -0.07
SHKBP1-214ENST00000597396 PRR20CP86479 221 aa14.6□□□□□ -0.07
SHKBP1-214ENST00000597396 PRR20DP86480 221 aa14.6□□□□□ -0.07
SHKBP1-214ENST00000597396 PRR20BP86481 221 aa14.6□□□□□ -0.07
SHKBP1-214ENST00000597396 PRR20AP86496 221 aa14.6□□□□□ -0.07
SHKBP1-214ENST00000597396 Q5BKY6 102 aa14.6□□□□□ -0.07
SHKBP1-214ENST00000597396 PATE2Q6UY27 113 aa14.6□□□□□ -0.07
SHKBP1-214ENST00000597396 ZNF709Q8N972 641 aa14.6□□□□□ -0.07
SHKBP1-214ENST00000597396 OR1L4Q8NGR5 311 aa14.6□□□□□ -0.07
SHKBP1-214ENST00000597396 CHAC2Q8WUX2 184 aa14.6□□□□□ -0.07
SHKBP1-214ENST00000597396 WDR61Q9GZS3 305 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-214ENST00000597396 SLC39A9Q9NUM3 307 aa14.6□□□□□ -0.07
SHKBP1-214ENST00000597396 AGRNO00468 2067 aa14.59□□□□□ -0.07
SHKBP1-214ENST00000597396 ELOA3CA0A087WX78 387 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms