RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 FAM90A2PQ658T7 463 aa6.29□□□□□ -1.4
VRK3-211ENST00000596445 C16orf54Q6UWD8 224 aa6.29□□□□□ -1.4
VRK3-211ENST00000596445 TCF24Q7RTU0 167 aa6.29□□□□□ -1.4
VRK3-211ENST00000596445 S100A7AQ86SG5 101 aa6.29□□□□□ -1.4
VRK3-211ENST00000596445 OR1B1Q8NGR6 318 aa6.29□□□□□ -1.4
VRK3-211ENST00000596445 ST6GAL2Q96JF0 529 aa6.29□□□□□ -1.4
VRK3-211ENST00000596445 GGTLC1Q9BX51 225 aa6.29□□□□□ -1.4
VRK3-211ENST00000596445 NPCDR1Q9BY65 106 aa6.29□□□□□ -1.4
VRK3-211ENST00000596445 SMIM3Q9BZL3 60 aa6.29□□□□□ -1.4
VRK3-211ENST00000596445 WDR61Q9GZS3 305 aaKnown RBP6.29□□□□□ -1.4
VRK3-211ENST00000596445 ARL6Q9H0F7 186 aa6.29□□□□□ -1.4
VRK3-211ENST00000596445 AURKAIP1Q9NWT8 199 aaPredicted RBP6.29□□□□□ -1.4
VRK3-211ENST00000596445 RNF222A6NCQ9 220 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 HMSDA8MTL9 139 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 PRB2P02812 416 aaPredicted RBP6.28□□□□□ -1.4
VRK3-211ENST00000596445 PRR20EP86478 221 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 PRR20CP86479 221 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 PRR20DP86480 221 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 PRR20BP86481 221 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 PRR20AP86496 221 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 DEFA6Q01524 100 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 GUCA2BQ16661 112 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 C1orf194Q5T5A4 169 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 MIC13Q5XKP0 118 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 Q6ZRG5 221 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 GTSCR1Q86UQ5 136 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 TCTE3Q8IZS6 198 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 STPG3Q8N7X2 389 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 ZNF709Q8N972 641 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 SCGB1C1Q8TD33 95 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 GLMPQ8WWB7 406 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 PPP1R14BQ96C90 147 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 PRR25Q96S07 402 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 SPAG8Q99932 426 aaPredicted RBP6.28□□□□□ -1.4
VRK3-211ENST00000596445 NEURL2Q9BR09 285 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 PARD6GQ9BYG4 376 aaPredicted RBP6.28□□□□□ -1.4
VRK3-211ENST00000596445 WFDC1Q9HC57 220 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 DOK5Q9P104 306 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 FBXL17Q9UF56 701 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 HIGD1AQ9Y241 93 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 PXMP4Q9Y6I8 212 aa6.28□□□□□ -1.4
VRK3-211ENST00000596445 ELOA3CA0A087WX78 387 aaPredicted RBP6.27□□□□□ -1.41
VRK3-211ENST00000596445 A0A1B0GVG6 124 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 HELTA6NFD8 242 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 ZNF98A6NK75 572 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 C17orf112F2Z3M2 114 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 ARPC5O15511 151 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 COX7A2P2O60397 106 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 OR5G3P0C626 314 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 AP2S1P53680 142 aaPredicted RBP6.27□□□□□ -1.41
VRK3-211ENST00000596445 B2MP61769 119 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 RPL11P62913 178 aaKnown RBP6.27□□□□□ -1.41
VRK3-211ENST00000596445 PAFAH1B2P68402 229 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 ZNF266Q14584 549 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 PATE2Q6UY27 113 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 SIGLEC15Q6ZMC9 328 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 AKAP14Q86UN6 197 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 OR11H4Q8NGC9 324 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 SHANK2-AS3Q9BTD1 123 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 SLC25A39Q9BZJ4 359 aaPredicted RBP6.27□□□□□ -1.41
VRK3-211ENST00000596445 MFFQ9GZY8 342 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 DNAJC4Q9NNZ3 241 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 KCNIP2Q9NS61 270 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 SLC39A9Q9NUM3 307 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 RNF24Q9Y225 148 aa6.27□□□□□ -1.41
VRK3-211ENST00000596445 IGKV3-7A0A075B6H7 116 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 TRAV2A0A0B4J234 112 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 OR4C46A6NHA9 309 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 H3BRN7 92 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 K7EIL1 84 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 DNASE2O00115 360 aaPredicted RBP6.26□□□□□ -1.41
VRK3-211ENST00000596445 ZNF345Q14585 488 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 C10orf113Q5VZT2 155 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 LINC00305Q7Z4B0 112 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 OR8I2Q8N0Y5 310 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 Q8N1Y9 231 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 GBGT1Q8N5D6 347 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 OR1L4Q8NGR5 311 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 TMEM37Q8WXS4 190 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 GPR82Q96P67 336 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 UHRF2Q96PU4 802 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 PFDN5Q99471 154 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 RSG1Q9BU20 258 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 ARV1Q9H2C2 271 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 MS4A6AQ9H2W1 248 aa6.26□□□□□ -1.41
VRK3-211ENST00000596445 PRKDCP78527 4128 aaKnown RBP6.25□□□□□ -1.41
VRK3-211ENST00000596445 BORCS7-ASMTA0A0B4J1R7 106 aa6.25□□□□□ -1.41
VRK3-211ENST00000596445 A0A0D9SG52 128 aa6.25□□□□□ -1.41
VRK3-211ENST00000596445 TAAR5O14804 337 aa6.25□□□□□ -1.41
VRK3-211ENST00000596445 C1QBP02746 253 aa6.25□□□□□ -1.41
VRK3-211ENST00000596445 CD7P09564 240 aa6.25□□□□□ -1.41
VRK3-211ENST00000596445 GALR1P47211 349 aa6.25□□□□□ -1.41
VRK3-211ENST00000596445 CD81P60033 236 aa6.25□□□□□ -1.41
VRK3-211ENST00000596445 LEMD1Q68G75 181 aa6.25□□□□□ -1.41
VRK3-211ENST00000596445 KCNRGQ8N5I3 272 aa6.25□□□□□ -1.41
VRK3-211ENST00000596445 STXBP6Q8NFX7 210 aa6.25□□□□□ -1.41
VRK3-211ENST00000596445 GATAD1Q8WUU5 269 aa6.25□□□□□ -1.41
VRK3-211ENST00000596445 FAM110AQ9BQ89 295 aa6.25□□□□□ -1.41
VRK3-211ENST00000596445 SCRT1Q9BWW7 348 aa6.25□□□□□ -1.41
VRK3-211ENST00000596445 SLC25A22Q9H936 323 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms