RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 S100A11P31949 105 aa13.22□□□□□ -0.29
HOMER3-208ENST00000595756 CMC4P56277 68 aaPredicted RBP13.22□□□□□ -0.29
HOMER3-208ENST00000595756 FCN2Q15485 313 aa13.22□□□□□ -0.29
HOMER3-208ENST00000595756 TMEM252Q8N6L7 170 aa13.22□□□□□ -0.29
HOMER3-208ENST00000595756 OR51G1Q8NGK1 321 aa13.22□□□□□ -0.29
HOMER3-208ENST00000595756 METTL26Q96S19 204 aa13.22□□□□□ -0.29
HOMER3-208ENST00000595756 TMEM231Q9H6L2 316 aa13.22□□□□□ -0.29
HOMER3-208ENST00000595756 MAP6D1Q9H9H5 199 aa13.22□□□□□ -0.29
HOMER3-208ENST00000595756 FRAS1Q86XX4 4008 aa13.21□□□□□ -0.29
HOMER3-208ENST00000595756 CXorf65A6NEN9 183 aa13.21□□□□□ -0.29
HOMER3-208ENST00000595756 CXCL3P19876 107 aa13.21□□□□□ -0.29
HOMER3-208ENST00000595756 ATP6V1FQ16864 119 aa13.21□□□□□ -0.29
HOMER3-208ENST00000595756 FAM90A2PQ658T7 463 aa13.21□□□□□ -0.29
HOMER3-208ENST00000595756 LINC00476Q8WZB0 136 aa13.21□□□□□ -0.29
HOMER3-208ENST00000595756 IGKV1D-37A0A075B6S9 117 aa13.2□□□□□ -0.3
HOMER3-208ENST00000595756 IL4P05112 153 aa13.2□□□□□ -0.3
HOMER3-208ENST00000595756 PSG1P11464 419 aa13.2□□□□□ -0.3
HOMER3-208ENST00000595756 RPL35AP18077 110 aaKnown RBP13.2□□□□□ -0.3
HOMER3-208ENST00000595756 S100A7P31151 101 aa13.2□□□□□ -0.3
HOMER3-208ENST00000595756 NUP62P37198 522 aaPredicted RBP13.2□□□□□ -0.3
HOMER3-208ENST00000595756 EWSR1Q01844 656 aaKnown RBP eCLIP13.2□□□□□ -0.3
HOMER3-208ENST00000595756 BAXQ07812 192 aa13.2□□□□□ -0.3
HOMER3-208ENST00000595756 FGL1Q08830 312 aa13.2□□□□□ -0.3
HOMER3-208ENST00000595756 SLC38A11Q08AI6 406 aa13.2□□□□□ -0.3
HOMER3-208ENST00000595756 PMS2P11Q13670 270 aa13.2□□□□□ -0.3
HOMER3-208ENST00000595756 TEPPQ6URK8 271 aa13.2□□□□□ -0.3
HOMER3-208ENST00000595756 OR11H7Q8NGC8 314 aa13.2□□□□□ -0.3
HOMER3-208ENST00000595756 THAP6Q8TBB0 222 aa13.2□□□□□ -0.3
HOMER3-208ENST00000595756 GRAMD2BQ96HH9 432 aa13.2□□□□□ -0.3
HOMER3-208ENST00000595756 IGHV3-49A0A0A0MS15 119 aa13.19□□□□□ -0.3
HOMER3-208ENST00000595756 CCNKO75909 580 aa13.19□□□□□ -0.3
HOMER3-208ENST00000595756 CST7O76096 145 aa13.19□□□□□ -0.3
HOMER3-208ENST00000595756 GIPP09681 153 aaPredicted RBP13.19□□□□□ -0.3
HOMER3-208ENST00000595756 CRYBB3P26998 211 aa13.19□□□□□ -0.3
HOMER3-208ENST00000595756 SELENOTP62341 195 aa13.19□□□□□ -0.3
HOMER3-208ENST00000595756 APRG1Q8IVJ8 170 aa13.19□□□□□ -0.3
HOMER3-208ENST00000595756 LILRB2Q8N423 598 aa13.19□□□□□ -0.3
HOMER3-208ENST00000595756 TMEM217Q8N7C4 229 aa13.19□□□□□ -0.3
HOMER3-208ENST00000595756 BPIFCQ8NFQ6 507 aa13.19□□□□□ -0.3
HOMER3-208ENST00000595756 RNF125Q96EQ8 232 aa13.19□□□□□ -0.3
HOMER3-208ENST00000595756 VSIRQ9H7M9 311 aa13.19□□□□□ -0.3
HOMER3-208ENST00000595756 OR5AC2Q9NZP5 309 aa13.19□□□□□ -0.3
HOMER3-208ENST00000595756 IGKV1OR2-108A0A075B7D4 117 aa13.18□□□□□ -0.3
HOMER3-208ENST00000595756 IGSF23A1L1A6 192 aa13.18□□□□□ -0.3
HOMER3-208ENST00000595756 H0YIZ8 118 aa13.18□□□□□ -0.3
HOMER3-208ENST00000595756 HNRNPCP07910 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
HOMER3-208ENST00000595756 RAP2BP61225 183 aa13.18□□□□□ -0.3
HOMER3-208ENST00000595756 PAFAH1B2P68402 229 aa13.18□□□□□ -0.3
HOMER3-208ENST00000595756 ZNF90Q03938 601 aa13.18□□□□□ -0.3
HOMER3-208ENST00000595756 ARL16Q0P5N6 197 aa13.18□□□□□ -0.3
HOMER3-208ENST00000595756 RAB31Q13636 194 aa13.18□□□□□ -0.3
HOMER3-208ENST00000595756 ST8SIA2Q92186 375 aa13.18□□□□□ -0.3
HOMER3-208ENST00000595756 RNF126Q9BV68 326 aa13.18□□□□□ -0.3
HOMER3-208ENST00000595756 UQCC1Q9NVA1 299 aa13.18□□□□□ -0.3
HOMER3-208ENST00000595756 RABAC1Q9UI14 185 aa13.18□□□□□ -0.3
HOMER3-208ENST00000595756 TRAV2A0A0B4J234 112 aa13.17□□□□□ -0.3
HOMER3-208ENST00000595756 TFPI2P48307 235 aa13.17□□□□□ -0.3
HOMER3-208ENST00000595756 EIF2B2P49770 351 aaKnown RBP13.17□□□□□ -0.3
HOMER3-208ENST00000595756 ZNF124Q15973 351 aa13.17□□□□□ -0.3
HOMER3-208ENST00000595756 TCF24Q7RTU0 167 aa13.17□□□□□ -0.3
HOMER3-208ENST00000595756 S100A7AQ86SG5 101 aa13.17□□□□□ -0.3
HOMER3-208ENST00000595756 GATAD1Q8WUU5 269 aa13.17□□□□□ -0.3
HOMER3-208ENST00000595756 TMEM147Q9BVK8 224 aa13.17□□□□□ -0.3
HOMER3-208ENST00000595756 CSTL1Q9H114 145 aa13.17□□□□□ -0.3
HOMER3-208ENST00000595756 IGKV3-7A0A075B6H7 116 aa13.16□□□□□ -0.3
HOMER3-208ENST00000595756 IGHV3OR16-13A0A075B7E8 117 aa13.16□□□□□ -0.3
HOMER3-208ENST00000595756 IGHV3-74A0A0B4J1X5 117 aa13.16□□□□□ -0.3
HOMER3-208ENST00000595756 VWC2Q2TAL6 325 aa13.16□□□□□ -0.3
HOMER3-208ENST00000595756 CEMP1Q6PRD7 247 aaPredicted RBP13.16□□□□□ -0.3
HOMER3-208ENST00000595756 CYP2G1PQ6ZSU1 146 aa13.16□□□□□ -0.3
HOMER3-208ENST00000595756 MBD2Q9UBB5 411 aa13.16□□□□□ -0.3
HOMER3-208ENST00000595756 SLC45A2Q9UMX9 530 aa13.16□□□□□ -0.3
HOMER3-208ENST00000595756 DFFBO76075 338 aa13.15□□□□□ -0.3
HOMER3-208ENST00000595756 AP2S1P53680 142 aaPredicted RBP13.15□□□□□ -0.3
HOMER3-208ENST00000595756 OR2F1Q13607 317 aa13.15□□□□□ -0.3
HOMER3-208ENST00000595756 USF2Q15853 346 aaPredicted RBP13.15□□□□□ -0.3
HOMER3-208ENST00000595756 ZNF546Q86UE3 836 aa13.15□□□□□ -0.3
HOMER3-208ENST00000595756 GBGT1Q8N5D6 347 aa13.15□□□□□ -0.3
HOMER3-208ENST00000595756 PBDC1Q9BVG4 233 aa13.15□□□□□ -0.3
HOMER3-208ENST00000595756 MS4A6AQ9H2W1 248 aa13.15□□□□□ -0.3
HOMER3-208ENST00000595756 U3KQE9 123 aa13.15□□□□□ -0.3
HOMER3-208ENST00000595756 VPS13DQ5THJ4 4388 aa13.15□□□□□ -0.3
HOMER3-208ENST00000595756 DNAH6Q9C0G6 4158 aa13.14□□□□□ -0.31
HOMER3-208ENST00000595756 DNAH10Q8IVF4 4471 aa13.14□□□□□ -0.31
HOMER3-208ENST00000595756 MPDU1O75352 247 aa13.14□□□□□ -0.31
HOMER3-208ENST00000595756 APOHP02749 345 aaPredicted RBP13.14□□□□□ -0.31
HOMER3-208ENST00000595756 RPL12P30050 165 aaKnown RBP13.14□□□□□ -0.31
HOMER3-208ENST00000595756 LYZP61626 148 aa13.14□□□□□ -0.31
HOMER3-208ENST00000595756 NHLH2Q02577 135 aa13.14□□□□□ -0.31
HOMER3-208ENST00000595756 PXDC1Q5TGL8 231 aa13.14□□□□□ -0.31
HOMER3-208ENST00000595756 OR5C1Q8NGR4 320 aa13.14□□□□□ -0.31
HOMER3-208ENST00000595756 C11orf68Q9H3H3 251 aaKnown RBP13.14□□□□□ -0.31
HOMER3-208ENST00000595756 RNF24Q9Y225 148 aa13.14□□□□□ -0.31
HOMER3-208ENST00000595756 WDR83OSQ9Y284 106 aa13.14□□□□□ -0.31
HOMER3-208ENST00000595756 KLK5Q9Y337 293 aaPredicted RBP13.14□□□□□ -0.31
HOMER3-208ENST00000595756 HELTA6NFD8 242 aa13.13□□□□□ -0.31
HOMER3-208ENST00000595756 AGPAT2O15120 278 aa13.13□□□□□ -0.31
HOMER3-208ENST00000595756 PLP1P60201 277 aa13.13□□□□□ -0.31
HOMER3-208ENST00000595756 DNASE2O00115 360 aaPredicted RBP13.12□□□□□ -0.31
HOMER3-208ENST00000595756 BUB3O43684 328 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms