RNA–Protein interactions for RNA: ENST00000593549.5

SOX2-OT-220, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 756 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-220ENST00000593549 NUP62P37198 522 aaPredicted RBP10.07□□□□□ -0.8
SOX2-OT-220ENST00000593549 VWC2Q2TAL6 325 aa10.07□□□□□ -0.8
SOX2-OT-220ENST00000593549 SIGLEC15Q6ZMC9 328 aa10.07□□□□□ -0.8
SOX2-OT-220ENST00000593549 STX12Q86Y82 276 aa10.07□□□□□ -0.8
SOX2-OT-220ENST00000593549 APRG1Q8IVJ8 170 aa10.07□□□□□ -0.8
SOX2-OT-220ENST00000593549 MGST2Q99735 147 aa10.07□□□□□ -0.8
SOX2-OT-220ENST00000593549 COL7A1Q02388 2944 aa10.06□□□□□ -0.8
SOX2-OT-220ENST00000593549 LINC00869P0C866 280 aa10.06□□□□□ -0.8
SOX2-OT-220ENST00000593549 SELENOTP62341 195 aa10.06□□□□□ -0.8
SOX2-OT-220ENST00000593549 EWSR1Q01844 656 aaKnown RBP eCLIP10.06□□□□□ -0.8
SOX2-OT-220ENST00000593549 OXA1LQ15070 435 aa10.06□□□□□ -0.8
SOX2-OT-220ENST00000593549 FCN2Q15485 313 aa10.06□□□□□ -0.8
SOX2-OT-220ENST00000593549 OR1B1Q8NGR6 318 aa10.06□□□□□ -0.8
SOX2-OT-220ENST00000593549 PPP1R14BQ96C90 147 aa10.06□□□□□ -0.8
SOX2-OT-220ENST00000593549 RNF126Q9BV68 326 aa10.06□□□□□ -0.8
SOX2-OT-220ENST00000593549 UQCC1Q9NVA1 299 aa10.06□□□□□ -0.8
SOX2-OT-220ENST00000593549 DOK5Q9P104 306 aa10.06□□□□□ -0.8
SOX2-OT-220ENST00000593549 PFDN2Q9UHV9 154 aa10.06□□□□□ -0.8
SOX2-OT-220ENST00000593549 SLC45A2Q9UMX9 530 aa10.06□□□□□ -0.8
SOX2-OT-220ENST00000593549 U3KQK5 164 aa10.06□□□□□ -0.8
SOX2-OT-220ENST00000593549 AGPAT2O15120 278 aa10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 MPC2O95563 127 aa10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 S100A11P31949 105 aa10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 AP2S1P53680 142 aaPredicted RBP10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 PLP1P60201 277 aa10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 HBG1P69891 147 aa10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 HBG2P69892 147 aa10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 NHLH2Q02577 135 aa10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 C1orf194Q5T5A4 169 aa10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 OR11H7Q8NGC8 314 aa10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 RCHY1Q96PM5 261 aa10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 TMEM147Q9BVK8 224 aa10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 GGTLC1Q9BX51 225 aa10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 MED28Q9H204 178 aa10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 NRN1Q9NPD7 142 aa10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 WDR83OSQ9Y284 106 aa10.05□□□□□ -0.8
SOX2-OT-220ENST00000593549 LOC102724200A0A096LPH7 203 aaPredicted RBP10.04□□□□□ -0.8
SOX2-OT-220ENST00000593549 UBE2L5PA0A1B0GUS4 154 aa10.04□□□□□ -0.8
SOX2-OT-220ENST00000593549 ZNF98A6NK75 572 aa10.04□□□□□ -0.8
SOX2-OT-220ENST00000593549 ZNF688P0C7X2 276 aa10.04□□□□□ -0.8
SOX2-OT-220ENST00000593549 CMC4P56277 68 aaPredicted RBP10.04□□□□□ -0.8
SOX2-OT-220ENST00000593549 DEFB131AP59861 70 aa10.04□□□□□ -0.8
SOX2-OT-220ENST00000593549 LEMD1Q68G75 181 aa10.04□□□□□ -0.8
SOX2-OT-220ENST00000593549 ZNF546Q86UE3 836 aa10.04□□□□□ -0.8
SOX2-OT-220ENST00000593549 SCRT1Q9BWW7 348 aa10.04□□□□□ -0.8
SOX2-OT-220ENST00000593549 SLC25A39Q9BZJ4 359 aaPredicted RBP10.04□□□□□ -0.8
SOX2-OT-220ENST00000593549 SLC25A31Q9H0C2 315 aa10.04□□□□□ -0.8
SOX2-OT-220ENST00000593549 SLC25A32Q9H2D1 315 aa10.04□□□□□ -0.8
SOX2-OT-220ENST00000593549 ZMAT4Q9H898 229 aa10.04□□□□□ -0.8
SOX2-OT-220ENST00000593549 RETNQ9HD89 108 aa10.04□□□□□ -0.8
SOX2-OT-220ENST00000593549 MBD2Q9UBB5 411 aa10.04□□□□□ -0.8
SOX2-OT-220ENST00000593549 H3BRN7 92 aa10.03□□□□□ -0.8
SOX2-OT-220ENST00000593549 HYPMO75409 117 aa10.03□□□□□ -0.8
SOX2-OT-220ENST00000593549 PET100P0DJ07 73 aa10.03□□□□□ -0.8
SOX2-OT-220ENST00000593549 CAMLGP49069 296 aa10.03□□□□□ -0.8
SOX2-OT-220ENST00000593549 ATP6V1FQ16864 119 aa10.03□□□□□ -0.8
SOX2-OT-220ENST00000593549 PATE2Q6UY27 113 aa10.03□□□□□ -0.8
SOX2-OT-220ENST00000593549 OR8I2Q8N0Y5 310 aa10.03□□□□□ -0.8
SOX2-OT-220ENST00000593549 OR5C1Q8NGR4 320 aa10.03□□□□□ -0.8
SOX2-OT-220ENST00000593549 UHRF2Q96PU4 802 aa10.03□□□□□ -0.8
SOX2-OT-220ENST00000593549 SPATA25Q9BR10 227 aa10.03□□□□□ -0.8
SOX2-OT-220ENST00000593549 SHANK2-AS3Q9BTD1 123 aa10.03□□□□□ -0.8
SOX2-OT-220ENST00000593549 ARL6Q9H0F7 186 aa10.03□□□□□ -0.8
SOX2-OT-220ENST00000593549 SLC25A22Q9H936 323 aa10.03□□□□□ -0.8
SOX2-OT-220ENST00000593549 FBXL17Q9UF56 701 aa10.03□□□□□ -0.8
SOX2-OT-220ENST00000593549 HIGD1AQ9Y241 93 aa10.03□□□□□ -0.8
SOX2-OT-220ENST00000593549 OR5G3P0C626 314 aa10.02□□□□□ -0.81
SOX2-OT-220ENST00000593549 RPL35AP18077 110 aaKnown RBP10.02□□□□□ -0.81
SOX2-OT-220ENST00000593549 RAP2BP61225 183 aa10.02□□□□□ -0.81
SOX2-OT-220ENST00000593549 BAXQ07812 192 aa10.02□□□□□ -0.81
SOX2-OT-220ENST00000593549 MIC13Q5XKP0 118 aa10.02□□□□□ -0.81
SOX2-OT-220ENST00000593549 C17orf77Q96MU5 243 aa10.02□□□□□ -0.81
SOX2-OT-220ENST00000593549 ARV1Q9H2C2 271 aa10.02□□□□□ -0.81
SOX2-OT-220ENST00000593549 HUWE1Q7Z6Z7 4374 aaKnown RBP10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 SOCS3O14543 225 aa10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 LYL1P12980 280 aa10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 FGF7P21781 194 aa10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 PRR20EP86478 221 aa10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 PRR20CP86479 221 aa10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 PRR20DP86480 221 aa10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 PRR20BP86481 221 aa10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 PRR20AP86496 221 aa10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 RAB31Q13636 194 aa10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 CLINT1Q14677 625 aa10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 OPCMLQ14982 345 aa10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 PSMG4Q5JS54 123 aa10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 PXDC1Q5TGL8 231 aa10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 THAP6Q8TBB0 222 aa10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 CHAC2Q8WUX2 184 aa10.01□□□□□ -0.81
SOX2-OT-220ENST00000593549 KNCNA6PVL3 124 aa10□□□□□ -0.81
SOX2-OT-220ENST00000593549 RPL12P30050 165 aaKnown RBP10□□□□□ -0.81
SOX2-OT-220ENST00000593549 GALR1P47211 349 aa10□□□□□ -0.81
SOX2-OT-220ENST00000593549 RPL29P47914 159 aaKnown RBP10□□□□□ -0.81
SOX2-OT-220ENST00000593549 APOC4P55056 127 aa10□□□□□ -0.81
SOX2-OT-220ENST00000593549 SNRPD3P62318 126 aaKnown RBP10□□□□□ -0.81
SOX2-OT-220ENST00000593549 TMEM37Q8WXS4 190 aa10□□□□□ -0.81
SOX2-OT-220ENST00000593549 NPCDR1Q9BY65 106 aa10□□□□□ -0.81
SOX2-OT-220ENST00000593549 SEPSECSQ9HD40 501 aaKnown RBP10□□□□□ -0.81
SOX2-OT-220ENST00000593549 HSPB11Q9Y547 144 aa10□□□□□ -0.81
SOX2-OT-220ENST00000593549 KIR2DL5BA0A0G2JN68 375 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms