RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 C16orf54Q6UWD8 224 aa11.2□□□□□ -0.62
DDX39A-221ENST00000593026 CHAC2Q8WUX2 184 aa11.2□□□□□ -0.62
DDX39A-221ENST00000593026 GLMPQ8WWB7 406 aa11.2□□□□□ -0.62
DDX39A-221ENST00000593026 NEURL2Q9BR09 285 aa11.2□□□□□ -0.62
DDX39A-221ENST00000593026 GGTLC1Q9BX51 225 aa11.2□□□□□ -0.62
DDX39A-221ENST00000593026 DOK5Q9P104 306 aa11.2□□□□□ -0.62
DDX39A-221ENST00000593026 SLC45A2Q9UMX9 530 aa11.2□□□□□ -0.62
DDX39A-221ENST00000593026 SMAD5-AS1Q9Y6J3 95 aa11.2□□□□□ -0.62
DDX39A-221ENST00000593026 HELTA6NFD8 242 aa11.19□□□□□ -0.62
DDX39A-221ENST00000593026 MPDU1O75352 247 aa11.19□□□□□ -0.62
DDX39A-221ENST00000593026 CD7P09564 240 aa11.19□□□□□ -0.62
DDX39A-221ENST00000593026 S100A7P31151 101 aa11.19□□□□□ -0.62
DDX39A-221ENST00000593026 Q6ZNX1 250 aa11.19□□□□□ -0.62
DDX39A-221ENST00000593026 Q8N1Y9 231 aa11.19□□□□□ -0.62
DDX39A-221ENST00000593026 GBGT1Q8N5D6 347 aa11.19□□□□□ -0.62
DDX39A-221ENST00000593026 ATP5SQ99766 215 aa11.19□□□□□ -0.62
DDX39A-221ENST00000593026 FXYD6-FXYD2A0A087WZ82 144 aa11.18□□□□□ -0.62
DDX39A-221ENST00000593026 HYPMO75409 117 aa11.18□□□□□ -0.62
DDX39A-221ENST00000593026 OR5G3P0C626 314 aa11.18□□□□□ -0.62
DDX39A-221ENST00000593026 TFPI2P48307 235 aa11.18□□□□□ -0.62
DDX39A-221ENST00000593026 PLP1P60201 277 aa11.18□□□□□ -0.62
DDX39A-221ENST00000593026 C1orf194Q5T5A4 169 aa11.18□□□□□ -0.62
DDX39A-221ENST00000593026 PXDC1Q5TGL8 231 aa11.18□□□□□ -0.62
DDX39A-221ENST00000593026 STPG3Q8N7X2 389 aa11.18□□□□□ -0.62
DDX39A-221ENST00000593026 SMIM3Q9BZL3 60 aa11.18□□□□□ -0.62
DDX39A-221ENST00000593026 ARL6Q9H0F7 186 aa11.18□□□□□ -0.62
DDX39A-221ENST00000593026 MS4A6AQ9H2W1 248 aa11.18□□□□□ -0.62
DDX39A-221ENST00000593026 HIGD1AQ9Y241 93 aa11.18□□□□□ -0.62
DDX39A-221ENST00000593026 DNASE2O00115 360 aaPredicted RBP11.17□□□□□ -0.62
DDX39A-221ENST00000593026 RPL29P47914 159 aaKnown RBP11.17□□□□□ -0.62
DDX39A-221ENST00000593026 AP2S1P53680 142 aaPredicted RBP11.17□□□□□ -0.62
DDX39A-221ENST00000593026 OPCMLQ14982 345 aa11.17□□□□□ -0.62
DDX39A-221ENST00000593026 MIC13Q5XKP0 118 aa11.17□□□□□ -0.62
DDX39A-221ENST00000593026 SIGLEC15Q6ZMC9 328 aa11.17□□□□□ -0.62
DDX39A-221ENST00000593026 S100A7AQ86SG5 101 aa11.17□□□□□ -0.62
DDX39A-221ENST00000593026 WFDC3Q8IUB2 231 aa11.17□□□□□ -0.62
DDX39A-221ENST00000593026 STXBP6Q8NFX7 210 aa11.17□□□□□ -0.62
DDX39A-221ENST00000593026 AQP10Q96PS8 301 aa11.17□□□□□ -0.62
DDX39A-221ENST00000593026 NPCDR1Q9BY65 106 aa11.17□□□□□ -0.62
DDX39A-221ENST00000593026 FBXL17Q9UF56 701 aa11.17□□□□□ -0.62
DDX39A-221ENST00000593026 TRAV2A0A0B4J234 112 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 ZNF98A6NK75 572 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 COX7A2P2O60397 106 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 IFNA5P01569 189 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 IGHV4-30-4P0DP06 118 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 B2MP61769 119 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 PRR20EP86478 221 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 PRR20CP86479 221 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 PRR20DP86480 221 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 PRR20BP86481 221 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 PRR20AP86496 221 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 Q6ZRG5 221 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 OR8I2Q8N0Y5 310 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 INO80EQ8NBZ0 244 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-221ENST00000593026 UHRF2Q96PU4 802 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 SLC25A39Q9BZJ4 359 aaPredicted RBP11.16□□□□□ -0.62
DDX39A-221ENST00000593026 WDR61Q9GZS3 305 aaKnown RBP11.16□□□□□ -0.62
DDX39A-221ENST00000593026 ARV1Q9H2C2 271 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 SLC25A22Q9H936 323 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 SLC39A9Q9NUM3 307 aa11.16□□□□□ -0.62
DDX39A-221ENST00000593026 ELOA3CA0A087WX78 387 aaPredicted RBP11.15□□□□□ -0.62
DDX39A-221ENST00000593026 OR11H12B2RN74 326 aa11.15□□□□□ -0.62
DDX39A-221ENST00000593026 G3V3Q6 166 aa11.15□□□□□ -0.62
DDX39A-221ENST00000593026 H3BRN7 92 aa11.15□□□□□ -0.62
DDX39A-221ENST00000593026 LEMD1Q68G75 181 aa11.15□□□□□ -0.62
DDX39A-221ENST00000593026 PATE2Q6UY27 113 aa11.15□□□□□ -0.62
DDX39A-221ENST00000593026 ZNF709Q8N972 641 aa11.15□□□□□ -0.62
DDX39A-221ENST00000593026 SHANK2-AS3Q9BTD1 123 aa11.15□□□□□ -0.62
DDX39A-221ENST00000593026 SCRT1Q9BWW7 348 aa11.15□□□□□ -0.62
DDX39A-221ENST00000593026 WFDC10AQ9H1F0 79 aa11.15□□□□□ -0.62
DDX39A-221ENST00000593026 KCNIP2Q9NS61 270 aa11.15□□□□□ -0.62
DDX39A-221ENST00000593026 UBQLN2Q9UHD9 624 aa11.15□□□□□ -0.62
DDX39A-221ENST00000593026 TNFSF18Q9UNG2 199 aa11.15□□□□□ -0.62
DDX39A-221ENST00000593026 PXMP4Q9Y6I8 212 aa11.15□□□□□ -0.62
DDX39A-221ENST00000593026 C17orf112F2Z3M2 114 aa11.14□□□□□ -0.63
DDX39A-221ENST00000593026 SMLR1H3BR10 107 aa11.14□□□□□ -0.63
DDX39A-221ENST00000593026 ODF3L2Q3SX64 289 aa11.14□□□□□ -0.63
DDX39A-221ENST00000593026 DEFB125Q8N687 156 aa11.14□□□□□ -0.63
DDX39A-221ENST00000593026 SCGB1C1Q8TD33 95 aa11.14□□□□□ -0.63
DDX39A-221ENST00000593026 SLC25A32Q9H2D1 315 aa11.14□□□□□ -0.63
DDX39A-221ENST00000593026 TUBA4BQ9H853 241 aa11.14□□□□□ -0.63
DDX39A-221ENST00000593026 WFDC1Q9HC57 220 aa11.14□□□□□ -0.63
DDX39A-221ENST00000593026 NRN1Q9NPD7 142 aa11.14□□□□□ -0.63
DDX39A-221ENST00000593026 C19orf73Q9NVV2 129 aa11.14□□□□□ -0.63
DDX39A-221ENST00000593026 RNF24Q9Y225 148 aa11.14□□□□□ -0.63
DDX39A-221ENST00000593026 hCG_2014768A0A024R1R8 64 aa11.13□□□□□ -0.63
DDX39A-221ENST00000593026 RNF222A6NCQ9 220 aa11.13□□□□□ -0.63
DDX39A-221ENST00000593026 K7EQG2 157 aa11.13□□□□□ -0.63
DDX39A-221ENST00000593026 GALR1P47211 349 aa11.13□□□□□ -0.63
DDX39A-221ENST00000593026 CMC4P56277 68 aaPredicted RBP11.13□□□□□ -0.63
DDX39A-221ENST00000593026 C10orf113Q5VZT2 155 aa11.13□□□□□ -0.63
DDX39A-221ENST00000593026 LINC00305Q7Z4B0 112 aa11.13□□□□□ -0.63
DDX39A-221ENST00000593026 OR1L4Q8NGR5 311 aa11.13□□□□□ -0.63
DDX39A-221ENST00000593026 DCANP1Q8TF63 244 aa11.13□□□□□ -0.63
DDX39A-221ENST00000593026 GPR82Q96P67 336 aa11.13□□□□□ -0.63
DDX39A-221ENST00000593026 PFDN5Q99471 154 aa11.13□□□□□ -0.63
DDX39A-221ENST00000593026 FAM110AQ9BQ89 295 aa11.13□□□□□ -0.63
DDX39A-221ENST00000593026 PARD6GQ9BYG4 376 aaPredicted RBP11.13□□□□□ -0.63
DDX39A-221ENST00000593026 SRD5A3Q9H8P0 318 aa11.13□□□□□ -0.63
DDX39A-221ENST00000593026 DNAJC4Q9NNZ3 241 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms