RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 NANOS2P60321 138 aaKnown RBP7.58□□□□□ -1.2
VPS4B-207ENST00000591519 TMEM41BQ5BJD5 291 aa7.58□□□□□ -1.2
VPS4B-207ENST00000591519 NOXA1Q86UR1 476 aa7.58□□□□□ -1.2
VPS4B-207ENST00000591519 C12orf45Q8N5I9 185 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-207ENST00000591519 ZBTB8BQ8NAP8 495 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-207ENST00000591519 RNASEH2CQ8TDP1 164 aaKnown RBP7.58□□□□□ -1.2
VPS4B-207ENST00000591519 NPIPB3Q92617 1050 aa7.58□□□□□ -1.2
VPS4B-207ENST00000591519 GRAMD2BQ96HH9 432 aa7.58□□□□□ -1.2
VPS4B-207ENST00000591519 HRH4Q9H3N8 390 aa7.58□□□□□ -1.2
VPS4B-207ENST00000591519 TMEM231Q9H6L2 316 aa7.58□□□□□ -1.2
VPS4B-207ENST00000591519 TRAV30A0A087WSZ9 112 aa7.57□□□□□ -1.2
VPS4B-207ENST00000591519 CA1P00915 261 aaPredicted RBP7.57□□□□□ -1.2
VPS4B-207ENST00000591519 IGKV1-17P01599 117 aa7.57□□□□□ -1.2
VPS4B-207ENST00000591519 SLC25A4P12235 298 aa7.57□□□□□ -1.2
VPS4B-207ENST00000591519 OR10J1P30954 320 aa7.57□□□□□ -1.2
VPS4B-207ENST00000591519 RAB11AP62491 216 aa7.57□□□□□ -1.2
VPS4B-207ENST00000591519 LEMD1Q68G75 181 aa7.57□□□□□ -1.2
VPS4B-207ENST00000591519 ETFRF1Q6IPR1 90 aa7.57□□□□□ -1.2
VPS4B-207ENST00000591519 FAM24BQ8N5W8 94 aa7.57□□□□□ -1.2
VPS4B-207ENST00000591519 OR4D5Q8NGN0 318 aa7.57□□□□□ -1.2
VPS4B-207ENST00000591519 SLC35E1Q96K37 410 aa7.57□□□□□ -1.2
VPS4B-207ENST00000591519 CIB3Q96Q77 187 aaPredicted RBP7.57□□□□□ -1.2
VPS4B-207ENST00000591519 PSENENQ9NZ42 101 aa7.57□□□□□ -1.2
VPS4B-207ENST00000591519 LSM5Q9Y4Y9 91 aaKnown RBP7.57□□□□□ -1.2
VPS4B-207ENST00000591519 AGRNO00468 2067 aa7.56□□□□□ -1.2
VPS4B-207ENST00000591519 INMT-MINDY4F8WBC2 141 aa7.56□□□□□ -1.2
VPS4B-207ENST00000591519 H3BS24 57 aa7.56□□□□□ -1.2
VPS4B-207ENST00000591519 SCGB2A1O75556 95 aa7.56□□□□□ -1.2
VPS4B-207ENST00000591519 SIX6O95475 246 aa7.56□□□□□ -1.2
VPS4B-207ENST00000591519 SPP1P10451 314 aa7.56□□□□□ -1.2
VPS4B-207ENST00000591519 RPL11P62913 178 aaKnown RBP7.56□□□□□ -1.2
VPS4B-207ENST00000591519 RPP30P78346 268 aaKnown RBP7.56□□□□□ -1.2
VPS4B-207ENST00000591519 MORN3Q6PF18 240 aaPredicted RBP7.56□□□□□ -1.2
VPS4B-207ENST00000591519 TRPT1Q86TN4 253 aaKnown RBP7.56□□□□□ -1.2
VPS4B-207ENST00000591519 STHQ8IWL8 128 aa7.56□□□□□ -1.2
VPS4B-207ENST00000591519 Q8NAQ8 132 aa7.56□□□□□ -1.2
VPS4B-207ENST00000591519 OR1S2Q8NGQ3 325 aa7.56□□□□□ -1.2
VPS4B-207ENST00000591519 C2CD4CQ8TF44 421 aa7.56□□□□□ -1.2
VPS4B-207ENST00000591519 DCANP1Q8TF63 244 aa7.56□□□□□ -1.2
VPS4B-207ENST00000591519 METTL26Q96S19 204 aa7.56□□□□□ -1.2
VPS4B-207ENST00000591519 GPN1Q9HCN4 374 aaPredicted RBP7.56□□□□□ -1.2
VPS4B-207ENST00000591519 RCL1Q9Y2P8 373 aaKnown RBP7.56□□□□□ -1.2
VPS4B-207ENST00000591519 STRAPQ9Y3F4 350 aaKnown RBP7.56□□□□□ -1.2
VPS4B-207ENST00000591519 FRAS1Q86XX4 4008 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 SMCO3A2RU48 225 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 ZFP92A6NM28 416 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 ZNF705EA8MWA4 302 aaPredicted RBP7.55□□□□□ -1.2
VPS4B-207ENST00000591519 C11orf94C9JXX5 98 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 GOSR2O14653 212 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 DEDDO75618 318 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 CCNKO75909 580 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 MBPP02686 304 aaPredicted RBP7.55□□□□□ -1.2
VPS4B-207ENST00000591519 IL5P05113 134 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 IGLC1P0CG04 106 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 P2RY1P47900 373 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 AP2S1P53680 142 aaPredicted RBP7.55□□□□□ -1.2
VPS4B-207ENST00000591519 S100A10P60903 97 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 YPEL3P61236 119 aaPredicted RBP7.55□□□□□ -1.2
VPS4B-207ENST00000591519 OR2F1Q13607 317 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 GAMTQ14353 236 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 OR8G2PQ6IF36 304 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 GSG1LQ6UXU4 331 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 CSNK1G2-AS1Q8NCQ2 148 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 C2orf50Q96LR7 162 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 SEPSECSQ9HD40 501 aaKnown RBP7.55□□□□□ -1.2
VPS4B-207ENST00000591519 FBXL17Q9UF56 701 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 RABAC1Q9UI14 185 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 APLNQ9ULZ1 77 aa7.55□□□□□ -1.2
VPS4B-207ENST00000591519 L7N2F9 121 aa7.54□□□□□ -1.2
VPS4B-207ENST00000591519 DEFB4AO15263 64 aa7.54□□□□□ -1.2
VPS4B-207ENST00000591519 METTL15P1P0C7V9 234 aa7.54□□□□□ -1.2
VPS4B-207ENST00000591519 RBMY1A1P0DJD3 496 aaKnown RBP7.54□□□□□ -1.2
VPS4B-207ENST00000591519 RBMY1CP0DJD4 496 aa7.54□□□□□ -1.2
VPS4B-207ENST00000591519 MIFP14174 115 aa7.54□□□□□ -1.2
VPS4B-207ENST00000591519 GPX4P36969 197 aaPredicted RBP7.54□□□□□ -1.2
VPS4B-207ENST00000591519 BCAP31P51572 246 aa7.54□□□□□ -1.2
VPS4B-207ENST00000591519 PAX9P55771 341 aa7.54□□□□□ -1.2
VPS4B-207ENST00000591519 RRAS2P62070 204 aaPredicted RBP7.54□□□□□ -1.2
VPS4B-207ENST00000591519 VAMP2P63027 116 aa7.54□□□□□ -1.2
VPS4B-207ENST00000591519 AKR1C1Q04828 323 aa7.54□□□□□ -1.2
VPS4B-207ENST00000591519 RBMY1FQ15415 496 aaKnown RBP7.54□□□□□ -1.2
VPS4B-207ENST00000591519 Q8WTZ3 238 aa7.54□□□□□ -1.2
VPS4B-207ENST00000591519 NARS2Q96I59 477 aaKnown RBP7.54□□□□□ -1.2
VPS4B-207ENST00000591519 HELTA6NFD8 242 aa7.53□□□□□ -1.2
VPS4B-207ENST00000591519 K7EPK0 472 aa7.53□□□□□ -1.2
VPS4B-207ENST00000591519 IL4P05112 153 aa7.53□□□□□ -1.2
VPS4B-207ENST00000591519 RD3LP0DJH9 198 aa7.53□□□□□ -1.2
VPS4B-207ENST00000591519 EIF2B2P49770 351 aaKnown RBP7.53□□□□□ -1.2
VPS4B-207ENST00000591519 ATP5IP56385 69 aaPredicted RBP7.53□□□□□ -1.2
VPS4B-207ENST00000591519 ZNF90Q03938 601 aa7.53□□□□□ -1.2
VPS4B-207ENST00000591519 C16orf54Q6UWD8 224 aa7.53□□□□□ -1.2
VPS4B-207ENST00000591519 ACOT7LQ6ZUV0 252 aa7.53□□□□□ -1.2
VPS4B-207ENST00000591519 STXBP6Q8NFX7 210 aa7.53□□□□□ -1.2
VPS4B-207ENST00000591519 OR51G1Q8NGK1 321 aa7.53□□□□□ -1.2
VPS4B-207ENST00000591519 GLMPQ8WWB7 406 aa7.53□□□□□ -1.2
VPS4B-207ENST00000591519 SMIM8Q96KF7 97 aa7.53□□□□□ -1.2
VPS4B-207ENST00000591519 RAB40CQ96S21 281 aa7.53□□□□□ -1.2
VPS4B-207ENST00000591519 PBDC1Q9BVG4 233 aa7.53□□□□□ -1.2
VPS4B-207ENST00000591519 X6R8D5 127 aa7.53□□□□□ -1.2
VPS4B-207ENST00000591519 IGKV1D-37A0A075B6S9 117 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms