RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 CD5P06127 495 aa13.42□□□□□ -0.26
VAT1-208ENST00000590924 ZNF546Q86UE3 836 aa13.42□□□□□ -0.26
VAT1-208ENST00000590924 BPIFCQ8NFQ6 507 aa13.42□□□□□ -0.26
VAT1-208ENST00000590924 METTL26Q96S19 204 aa13.42□□□□□ -0.26
VAT1-208ENST00000590924 PFDN2Q9UHV9 154 aa13.42□□□□□ -0.26
VAT1-208ENST00000590924 A0A1W2PS18 150 aa13.41□□□□□ -0.26
VAT1-208ENST00000590924 DFFBO76075 338 aa13.41□□□□□ -0.26
VAT1-208ENST00000590924 TMEM61Q8N0U2 210 aa13.41□□□□□ -0.26
VAT1-208ENST00000590924 INO80EQ8NBZ0 244 aaPredicted RBP13.41□□□□□ -0.26
VAT1-208ENST00000590924 IL17DQ8TAD2 202 aa13.41□□□□□ -0.26
VAT1-208ENST00000590924 RNF125Q96EQ8 232 aa13.41□□□□□ -0.26
VAT1-208ENST00000590924 NARS2Q96I59 477 aaKnown RBP13.41□□□□□ -0.26
VAT1-208ENST00000590924 FAM110AQ9BQ89 295 aa13.41□□□□□ -0.26
VAT1-208ENST00000590924 VSIRQ9H7M9 311 aa13.41□□□□□ -0.26
VAT1-208ENST00000590924 SLC45A2Q9UMX9 530 aa13.41□□□□□ -0.26
VAT1-208ENST00000590924 U3KQE9 123 aa13.41□□□□□ -0.26
VAT1-208ENST00000590924 IGHV3OR16-8A0A075B7F1 116 aa13.4□□□□□ -0.26
VAT1-208ENST00000590924 TRAV25A0A0B4J276 109 aa13.4□□□□□ -0.26
VAT1-208ENST00000590924 G3V3Q6 166 aa13.4□□□□□ -0.26
VAT1-208ENST00000590924 CHEK1O14757 476 aa13.4□□□□□ -0.26
VAT1-208ENST00000590924 AGPAT2O15120 278 aa13.4□□□□□ -0.26
VAT1-208ENST00000590924 ZNF207O43670 478 aaKnown RBP13.4□□□□□ -0.26
VAT1-208ENST00000590924 HNRNPCP07910 306 aaKnown RBP eCLIP13.4□□□□□ -0.26
VAT1-208ENST00000590924 S100A7P31151 101 aa13.4□□□□□ -0.26
VAT1-208ENST00000590924 PLP1P60201 277 aa13.4□□□□□ -0.26
VAT1-208ENST00000590924 PXDC1Q5TGL8 231 aa13.4□□□□□ -0.26
VAT1-208ENST00000590924 BTNL8Q6UX41 500 aa13.4□□□□□ -0.26
VAT1-208ENST00000590924 ATP5SQ99766 215 aa13.4□□□□□ -0.26
VAT1-208ENST00000590924 RHPN1-AS1Q9BWJ2 59 aa13.4□□□□□ -0.26
VAT1-208ENST00000590924 TMEM231Q9H6L2 316 aa13.4□□□□□ -0.26
VAT1-208ENST00000590924 MLXQ9UH92 298 aa13.4□□□□□ -0.26
VAT1-208ENST00000590924 RABAC1Q9UI14 185 aa13.4□□□□□ -0.26
VAT1-208ENST00000590924 TNFSF18Q9UNG2 199 aa13.4□□□□□ -0.26
VAT1-208ENST00000590924 CAMLGP49069 296 aa13.39□□□□□ -0.27
VAT1-208ENST00000590924 EIF2B2P49770 351 aaKnown RBP13.39□□□□□ -0.27
VAT1-208ENST00000590924 OR2F1Q13607 317 aa13.39□□□□□ -0.27
VAT1-208ENST00000590924 USF2Q15853 346 aaPredicted RBP13.39□□□□□ -0.27
VAT1-208ENST00000590924 LAMTOR1Q6IAA8 161 aa13.39□□□□□ -0.27
VAT1-208ENST00000590924 ST6GAL2Q96JF0 529 aa13.39□□□□□ -0.27
VAT1-208ENST00000590924 MGST2Q99735 147 aa13.39□□□□□ -0.27
VAT1-208ENST00000590924 PARD6GQ9BYG4 376 aaPredicted RBP13.39□□□□□ -0.27
VAT1-208ENST00000590924 FXYD6-FXYD2A0A087WZ82 144 aa13.38□□□□□ -0.27
VAT1-208ENST00000590924 HMSDA8MTL9 139 aa13.38□□□□□ -0.27
VAT1-208ENST00000590924 RPL29P47914 159 aaKnown RBP13.38□□□□□ -0.27
VAT1-208ENST00000590924 CLINT1Q14677 625 aa13.38□□□□□ -0.27
VAT1-208ENST00000590924 TMEM182Q6ZP80 229 aaPredicted RBP13.38□□□□□ -0.27
VAT1-208ENST00000590924 S100A7AQ86SG5 101 aa13.38□□□□□ -0.27
VAT1-208ENST00000590924 GRAMD2BQ96HH9 432 aa13.38□□□□□ -0.27
VAT1-208ENST00000590924 UBE2L5PA0A1B0GUS4 154 aa13.37□□□□□ -0.27
VAT1-208ENST00000590924 IFNA5P01569 189 aa13.37□□□□□ -0.27
VAT1-208ENST00000590924 FGF7P21781 194 aa13.37□□□□□ -0.27
VAT1-208ENST00000590924 LYZP61626 148 aa13.37□□□□□ -0.27
VAT1-208ENST00000590924 TCTE3Q8IZS6 198 aa13.37□□□□□ -0.27
VAT1-208ENST00000590924 PBDC1Q9BVG4 233 aa13.37□□□□□ -0.27
VAT1-208ENST00000590924 WDR61Q9GZS3 305 aaKnown RBP13.37□□□□□ -0.27
VAT1-208ENST00000590924 RNF222A6NCQ9 220 aa13.36□□□□□ -0.27
VAT1-208ENST00000590924 BUB3O43684 328 aa13.36□□□□□ -0.27
VAT1-208ENST00000590924 LINC00869P0C866 280 aa13.36□□□□□ -0.27
VAT1-208ENST00000590924 GATA2P23769 480 aaPredicted RBP13.36□□□□□ -0.27
VAT1-208ENST00000590924 AP2S1P53680 142 aaPredicted RBP13.36□□□□□ -0.27
VAT1-208ENST00000590924 PRR20EP86478 221 aa13.36□□□□□ -0.27
VAT1-208ENST00000590924 PRR20CP86479 221 aa13.36□□□□□ -0.27
VAT1-208ENST00000590924 PRR20DP86480 221 aa13.36□□□□□ -0.27
VAT1-208ENST00000590924 PRR20BP86481 221 aa13.36□□□□□ -0.27
VAT1-208ENST00000590924 PRR20AP86496 221 aa13.36□□□□□ -0.27
VAT1-208ENST00000590924 OPCMLQ14982 345 aa13.36□□□□□ -0.27
VAT1-208ENST00000590924 C1orf194Q5T5A4 169 aa13.36□□□□□ -0.27
VAT1-208ENST00000590924 RBPMS2Q6ZRY4 209 aaKnown RBP13.36□□□□□ -0.27
VAT1-208ENST00000590924 ST8SIA2Q92186 375 aa13.36□□□□□ -0.27
VAT1-208ENST00000590924 GGTLC1Q9BX51 225 aa13.36□□□□□ -0.27
VAT1-208ENST00000590924 RNF24Q9Y225 148 aa13.36□□□□□ -0.27
VAT1-208ENST00000590924 SELENOKQ9Y6D0 94 aa13.36□□□□□ -0.27
VAT1-208ENST00000590924 hCG_2014768A0A024R1R8 64 aa13.35□□□□□ -0.27
VAT1-208ENST00000590924 TSPAN4O14817 238 aa13.35□□□□□ -0.27
VAT1-208ENST00000590924 HYPMO75409 117 aa13.35□□□□□ -0.27
VAT1-208ENST00000590924 JTBO76095 146 aa13.35□□□□□ -0.27
VAT1-208ENST00000590924 APOHP02749 345 aaPredicted RBP13.35□□□□□ -0.27
VAT1-208ENST00000590924 ZNF266Q14584 549 aa13.35□□□□□ -0.27
VAT1-208ENST00000590924 FAM90A2PQ658T7 463 aa13.35□□□□□ -0.27
VAT1-208ENST00000590924 C16orf54Q6UWD8 224 aa13.35□□□□□ -0.27
VAT1-208ENST00000590924 Q6ZRG5 221 aa13.35□□□□□ -0.27
VAT1-208ENST00000590924 SCGB1C1Q8TD33 95 aa13.35□□□□□ -0.27
VAT1-208ENST00000590924 RNF2Q99496 336 aa13.35□□□□□ -0.27
VAT1-208ENST00000590924 NPCDR1Q9BY65 106 aa13.35□□□□□ -0.27
VAT1-208ENST00000590924 KCNIP2Q9NS61 270 aa13.35□□□□□ -0.27
VAT1-208ENST00000590924 FBXL17Q9UF56 701 aa13.35□□□□□ -0.27
VAT1-208ENST00000590924 ELOA3CA0A087WX78 387 aaPredicted RBP13.34□□□□□ -0.27
VAT1-208ENST00000590924 IGHV3-49A0A0A0MS15 119 aa13.34□□□□□ -0.27
VAT1-208ENST00000590924 C17orf112F2Z3M2 114 aa13.34□□□□□ -0.27
VAT1-208ENST00000590924 SMLR1H3BR10 107 aa13.34□□□□□ -0.27
VAT1-208ENST00000590924 ORM2P19652 201 aa13.34□□□□□ -0.27
VAT1-208ENST00000590924 AKAP14Q86UN6 197 aa13.34□□□□□ -0.27
VAT1-208ENST00000590924 ZNF709Q8N972 641 aa13.34□□□□□ -0.27
VAT1-208ENST00000590924 SPAG8Q99932 426 aaPredicted RBP13.34□□□□□ -0.27
VAT1-208ENST00000590924 SMIM3Q9BZL3 60 aa13.34□□□□□ -0.27
VAT1-208ENST00000590924 MFFQ9GZY8 342 aa13.34□□□□□ -0.27
VAT1-208ENST00000590924 WFDC1Q9HC57 220 aa13.34□□□□□ -0.27
VAT1-208ENST00000590924 HYDINQ4G0P3 5121 aa13.34□□□□□ -0.27
VAT1-208ENST00000590924 LOC102724200A0A096LPH7 203 aaPredicted RBP13.33□□□□□ -0.28
VAT1-208ENST00000590924 HELTA6NFD8 242 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms