RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 CFDP00746 253 aaPredicted RBP16.38■□□□□ 0.21
MBD3-208ENST00000590830 PSMG4Q5JS54 123 aa16.38■□□□□ 0.21
MBD3-208ENST00000590830 C1orf194Q5T5A4 169 aa16.38■□□□□ 0.21
MBD3-208ENST00000590830 CYP2G1PQ6ZSU1 146 aa16.38■□□□□ 0.21
MBD3-208ENST00000590830 OR10P1Q8NGE3 313 aa16.38■□□□□ 0.21
MBD3-208ENST00000590830 PFDN2Q9UHV9 154 aa16.38■□□□□ 0.21
MBD3-208ENST00000590830 GIG44P09565 113 aaPredicted RBP16.37■□□□□ 0.21
MBD3-208ENST00000590830 ORM2P19652 201 aa16.37■□□□□ 0.21
MBD3-208ENST00000590830 NUP62P37198 522 aaPredicted RBP16.37■□□□□ 0.21
MBD3-208ENST00000590830 TRPT1Q86TN4 253 aaKnown RBP16.37■□□□□ 0.21
MBD3-208ENST00000590830 BPIFCQ8NFQ6 507 aa16.37■□□□□ 0.21
MBD3-208ENST00000590830 NPVFQ9HCQ7 196 aa16.37■□□□□ 0.21
MBD3-208ENST00000590830 FNDC10F2Z333 226 aa16.36■□□□□ 0.21
MBD3-208ENST00000590830 EWSR1Q01844 656 aaKnown RBP eCLIP16.36■□□□□ 0.21
MBD3-208ENST00000590830 STHQ8IWL8 128 aa16.36■□□□□ 0.21
MBD3-208ENST00000590830 PPP1R14BQ96C90 147 aa16.36■□□□□ 0.21
MBD3-208ENST00000590830 C17orf77Q96MU5 243 aa16.36■□□□□ 0.21
MBD3-208ENST00000590830 SEPSECSQ9HD40 501 aaKnown RBP16.36■□□□□ 0.21
MBD3-208ENST00000590830 SACSQ9NZJ4 4579 aa16.35■□□□□ 0.21
MBD3-208ENST00000590830 FAM24AA6NFZ4 105 aa16.35■□□□□ 0.21
MBD3-208ENST00000590830 ZNF98A6NK75 572 aa16.35■□□□□ 0.21
MBD3-208ENST00000590830 INMT-MINDY4F8WBC2 141 aa16.35■□□□□ 0.21
MBD3-208ENST00000590830 L7N2F9 121 aa16.35■□□□□ 0.21
MBD3-208ENST00000590830 DEDDO75618 318 aa16.35■□□□□ 0.21
MBD3-208ENST00000590830 VAMP2P63027 116 aa16.35■□□□□ 0.21
MBD3-208ENST00000590830 ACTL10Q5JWF8 245 aa16.35■□□□□ 0.21
MBD3-208ENST00000590830 MARVELD1Q9BSK0 173 aa16.35■□□□□ 0.21
MBD3-208ENST00000590830 SLC45A2Q9UMX9 530 aa16.35■□□□□ 0.21
MBD3-208ENST00000590830 A0A0J9YWU9 116 aa16.34■□□□□ 0.21
MBD3-208ENST00000590830 SOCS3O14543 225 aa16.34■□□□□ 0.21
MBD3-208ENST00000590830 SIX6O95475 246 aa16.34■□□□□ 0.21
MBD3-208ENST00000590830 CA1P00915 261 aaPredicted RBP16.34■□□□□ 0.21
MBD3-208ENST00000590830 RAB32Q13637 225 aa16.34■□□□□ 0.21
MBD3-208ENST00000590830 OR8I2Q8N0Y5 310 aa16.34■□□□□ 0.21
MBD3-208ENST00000590830 OR1B1Q8NGR6 318 aa16.34■□□□□ 0.21
MBD3-208ENST00000590830 GGACTQ9BVM4 153 aa16.34■□□□□ 0.21
MBD3-208ENST00000590830 SLC25A32Q9H2D1 315 aa16.34■□□□□ 0.21
MBD3-208ENST00000590830 GPN1Q9HCN4 374 aaPredicted RBP16.34■□□□□ 0.21
MBD3-208ENST00000590830 DOK5Q9P104 306 aa16.34■□□□□ 0.21
MBD3-208ENST00000590830 FBXL17Q9UF56 701 aa16.34■□□□□ 0.21
MBD3-208ENST00000590830 AGRNO00468 2067 aa16.34■□□□□ 0.21
MBD3-208ENST00000590830 BCAP31P51572 246 aa16.33■□□□□ 0.2
MBD3-208ENST00000590830 DEFB1P60022 68 aa16.33■□□□□ 0.2
MBD3-208ENST00000590830 MGAT4CQ9UBM8 478 aa16.33■□□□□ 0.2
MBD3-208ENST00000590830 CST7O76096 145 aa16.32■□□□□ 0.2
MBD3-208ENST00000590830 PLP1P60201 277 aa16.32■□□□□ 0.2
MBD3-208ENST00000590830 S100A10P60903 97 aa16.32■□□□□ 0.2
MBD3-208ENST00000590830 SNRPD3P62318 126 aaKnown RBP16.32■□□□□ 0.2
MBD3-208ENST00000590830 SLC38A11Q08AI6 406 aa16.32■□□□□ 0.2
MBD3-208ENST00000590830 TEPPQ6URK8 271 aa16.32■□□□□ 0.2
MBD3-208ENST00000590830 TMEM147Q9BVK8 224 aa16.32■□□□□ 0.2
MBD3-208ENST00000590830 SCRT1Q9BWW7 348 aa16.32■□□□□ 0.2
MBD3-208ENST00000590830 SLC25A22Q9H936 323 aa16.32■□□□□ 0.2
MBD3-208ENST00000590830 IGSF23A1L1A6 192 aa16.31■□□□□ 0.2
MBD3-208ENST00000590830 LINC00869P0C866 280 aa16.31■□□□□ 0.2
MBD3-208ENST00000590830 C4BPBP20851 252 aa16.31■□□□□ 0.2
MBD3-208ENST00000590830 CAV2P51636 162 aa16.31■□□□□ 0.2
MBD3-208ENST00000590830 SELENOTP62341 195 aa16.31■□□□□ 0.2
MBD3-208ENST00000590830 PATE2Q6UY27 113 aa16.31■□□□□ 0.2
MBD3-208ENST00000590830 GATAD1Q8WUU5 269 aa16.31■□□□□ 0.2
MBD3-208ENST00000590830 TENM2Q9NT68 2774 aa16.3■□□□□ 0.2
MBD3-208ENST00000590830 GOSR2O14653 212 aa16.3■□□□□ 0.2
MBD3-208ENST00000590830 PRAF2O60831 178 aa16.3■□□□□ 0.2
MBD3-208ENST00000590830 HYPMO75409 117 aa16.3■□□□□ 0.2
MBD3-208ENST00000590830 GDF5OSQ5U4N7 250 aa16.3■□□□□ 0.2
MBD3-208ENST00000590830 IL17DQ8TAD2 202 aa16.3■□□□□ 0.2
MBD3-208ENST00000590830 LINC00052Q96N35 136 aa16.3■□□□□ 0.2
MBD3-208ENST00000590830 MGST2Q99735 147 aa16.3■□□□□ 0.2
MBD3-208ENST00000590830 RARRES2Q99969 163 aa16.3■□□□□ 0.2
MBD3-208ENST00000590830 SHANK2-AS3Q9BTD1 123 aa16.3■□□□□ 0.2
MBD3-208ENST00000590830 RSG1Q9BU20 258 aa16.3■□□□□ 0.2
MBD3-208ENST00000590830 SLC25A39Q9BZJ4 359 aaPredicted RBP16.3■□□□□ 0.2
MBD3-208ENST00000590830 PLECQ15149 4684 aaKnown RBP16.29■□□□□ 0.2
MBD3-208ENST00000590830 H3BMM0 161 aa16.29■□□□□ 0.2
MBD3-208ENST00000590830 H3BRN7 92 aa16.29■□□□□ 0.2
MBD3-208ENST00000590830 AGPAT2O15120 278 aa16.29■□□□□ 0.2
MBD3-208ENST00000590830 DEFA1P59665 94 aa16.29■□□□□ 0.2
MBD3-208ENST00000590830 DEFA3P59666 94 aa16.29■□□□□ 0.2
MBD3-208ENST00000590830 TMEM252Q8N6L7 170 aa16.29■□□□□ 0.2
MBD3-208ENST00000590830 TMEM217Q8N7C4 229 aa16.29■□□□□ 0.2
MBD3-208ENST00000590830 OR11H2Q8NH07 326 aa16.29■□□□□ 0.2
MBD3-208ENST00000590830 LYRM2Q9NU23 88 aaPredicted RBP16.29■□□□□ 0.2
MBD3-208ENST00000590830 HIGD1AQ9Y241 93 aa16.29■□□□□ 0.2
MBD3-208ENST00000590830 RYR2Q92736 4967 aa16.28■□□□□ 0.2
MBD3-208ENST00000590830 SPP1P10451 314 aa16.28■□□□□ 0.2
MBD3-208ENST00000590830 PVALBP20472 110 aaPredicted RBP16.28■□□□□ 0.2
MBD3-208ENST00000590830 PSMB3P49720 205 aa16.28■□□□□ 0.2
MBD3-208ENST00000590830 MORN3Q6PF18 240 aaPredicted RBP16.28■□□□□ 0.2
MBD3-208ENST00000590830 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.28■□□□□ 0.2
MBD3-208ENST00000590830 C20orf173Q96LM9 149 aa16.28■□□□□ 0.2
MBD3-208ENST00000590830 UHRF2Q96PU4 802 aa16.28■□□□□ 0.2
MBD3-208ENST00000590830 ARL6Q9H0F7 186 aa16.28■□□□□ 0.2
MBD3-208ENST00000590830 LYSTQ99698 3801 aa16.28■□□□□ 0.2
MBD3-208ENST00000590830 OR5G3P0C626 314 aa16.27■□□□□ 0.2
MBD3-208ENST00000590830 ID1P41134 155 aa16.27■□□□□ 0.2
MBD3-208ENST00000590830 GALR1P47211 349 aa16.27■□□□□ 0.2
MBD3-208ENST00000590830 CSNK1G2-AS1Q8NCQ2 148 aa16.27■□□□□ 0.2
MBD3-208ENST00000590830 H0YIZ8 118 aa16.26■□□□□ 0.19
MBD3-208ENST00000590830 ISLRO14498 428 aa16.26■□□□□ 0.19
MBD3-208ENST00000590830 HLA-DRB4P13762 266 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms