RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 TOMM40O96008 361 aa6.87□□□□□ -1.31
SMAD4-206ENST00000588860 TGFAP01135 160 aa6.87□□□□□ -1.31
SMAD4-206ENST00000588860 MT-ND4LP03901 98 aa6.87□□□□□ -1.31
SMAD4-206ENST00000588860 IGHV4-31P0DP07 118 aa6.87□□□□□ -1.31
SMAD4-206ENST00000588860 RNF212Q495C1 297 aa6.87□□□□□ -1.31
SMAD4-206ENST00000588860 C9orf152Q5JTZ5 239 aa6.87□□□□□ -1.31
SMAD4-206ENST00000588860 SAMD5Q5TGI4 173 aa6.87□□□□□ -1.31
SMAD4-206ENST00000588860 C11orf52Q96A22 123 aa6.87□□□□□ -1.31
SMAD4-206ENST00000588860 FXYD5Q96DB9 178 aa6.87□□□□□ -1.31
SMAD4-206ENST00000588860 ZNF48Q96MX3 618 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-206ENST00000588860 C21orf62Q9NYP8 219 aa6.87□□□□□ -1.31
SMAD4-206ENST00000588860 FN1P02751 2386 aaKnown RBP6.87□□□□□ -1.31
SMAD4-206ENST00000588860 LOC105371267A0A1B0GV96 52 aa6.86□□□□□ -1.31
SMAD4-206ENST00000588860 MDFIC2A0A1B0GVS7 189 aa6.86□□□□□ -1.31
SMAD4-206ENST00000588860 CXorf65A6NEN9 183 aa6.86□□□□□ -1.31
SMAD4-206ENST00000588860 OR2T8A6NH00 312 aa6.86□□□□□ -1.31
SMAD4-206ENST00000588860 GGTLC3B5MD39 225 aa6.86□□□□□ -1.31
SMAD4-206ENST00000588860 G3V318 75 aa6.86□□□□□ -1.31
SMAD4-206ENST00000588860 YPEL3P61236 119 aaPredicted RBP6.86□□□□□ -1.31
SMAD4-206ENST00000588860 LEMD1Q68G75 181 aa6.86□□□□□ -1.31
SMAD4-206ENST00000588860 FAM24BQ8N5W8 94 aa6.86□□□□□ -1.31
SMAD4-206ENST00000588860 STXBP6Q8NFX7 210 aa6.86□□□□□ -1.31
SMAD4-206ENST00000588860 VN1R17PQ8TDU5 208 aa6.86□□□□□ -1.31
SMAD4-206ENST00000588860 Q96MF0 132 aa6.86□□□□□ -1.31
SMAD4-206ENST00000588860 TMEM68Q96MH6 324 aa6.86□□□□□ -1.31
SMAD4-206ENST00000588860 YPEL4Q96NS1 127 aa6.86□□□□□ -1.31
SMAD4-206ENST00000588860 CTDSP1Q9GZU7 261 aa6.86□□□□□ -1.31
SMAD4-206ENST00000588860 PRELID1Q9Y255 219 aa6.86□□□□□ -1.31
SMAD4-206ENST00000588860 TRAV41A0A0B4J266 112 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 WI2-2373I1.2A0A1W2PRP0 233 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 PGPEP1LA6NFU8 196 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 F8W735 103 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-206ENST00000588860 H7BYZ3 331 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 CLDN34H7C241 214 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 AMY1AP04745 511 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 IL4P05112 153 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 CRYBA1P05813 215 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 FOLR2P14207 255 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 GP9P14770 177 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 RAB5AP20339 215 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 HNF1AP20823 631 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 CRYBB3P26998 211 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 SUMO1P63165 101 aaKnown RBP6.85□□□□□ -1.31
SMAD4-206ENST00000588860 RHOGP84095 191 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 C15orf32Q32M92 178 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 ZNF343Q6P1L6 599 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 LINC01551Q86U37 167 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 ZNF329Q86UD4 541 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 Q8WTZ3 238 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 BLNKQ8WV28 456 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 MBD6Q96DN6 1003 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 RNF125Q96EQ8 232 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 TXN2Q99757 166 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 SLC25A39Q9BZJ4 359 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-206ENST00000588860 AURKAIP1Q9NWT8 199 aaPredicted RBP6.85□□□□□ -1.31
SMAD4-206ENST00000588860 MRPL27Q9P0M9 148 aaKnown RBP6.85□□□□□ -1.31
SMAD4-206ENST00000588860 MLXQ9UH92 298 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 PITPNC1Q9UKF7 332 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 URGCP-MRPS24S4R325 110 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 CSPG4Q6UVK1 2322 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 COL6A5A8TX70 2615 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 ACANP16112 2415 aa6.85□□□□□ -1.31
SMAD4-206ENST00000588860 TGIF2-C20orf24A0A0A6YYL0 155 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 H3BRN7 92 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 SNRPCP09234 159 aaKnown RBP6.84□□□□□ -1.31
SMAD4-206ENST00000588860 RPL35P42766 123 aaKnown RBP6.84□□□□□ -1.31
SMAD4-206ENST00000588860 CRIP2P52943 208 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-206ENST00000588860 KLK9Q2XQG4 91 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 DEFB112Q30KQ8 113 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 CENPWQ5EE01 88 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 LCE3BQ5TA77 95 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 BCL6BQ8N143 479 aaPredicted RBP6.84□□□□□ -1.31
SMAD4-206ENST00000588860 ZNF491Q8N8L2 437 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 NECAP1Q8NC96 275 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 ZNF502Q8TBZ5 544 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 EEF1AKMT3Q96AZ1 226 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 MS4A10Q96PG2 267 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 KRTAP4-12Q9BQ66 201 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 SHANK2-AS3Q9BTD1 123 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 ELOVL1Q9BW60 279 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 TMEM242Q9NWH2 141 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 TMEM14CQ9P0S9 112 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 LINC00527Q9UJ94 153 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 KLK9Q9UKQ9 250 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 ATRQ13535 2644 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 STAB1Q9NY15 2570 aa6.84□□□□□ -1.31
SMAD4-206ENST00000588860 JMJD1CQ15652 2540 aa6.83□□□□□ -1.32
SMAD4-206ENST00000588860 TRBV20OR9-2A0A075B6H5 130 aa6.83□□□□□ -1.32
SMAD4-206ENST00000588860 TRBV9A0A0B4J1U6 114 aa6.83□□□□□ -1.32
SMAD4-206ENST00000588860 HELTA6NFD8 242 aa6.83□□□□□ -1.32
SMAD4-206ENST00000588860 C1orf196B1AJZ1 125 aa6.83□□□□□ -1.32
SMAD4-206ENST00000588860 C9JCJ5 164 aa6.83□□□□□ -1.32
SMAD4-206ENST00000588860 H3BTX0 84 aa6.83□□□□□ -1.32
SMAD4-206ENST00000588860 M0QZK8 103 aa6.83□□□□□ -1.32
SMAD4-206ENST00000588860 PEX7O00628 323 aa6.83□□□□□ -1.32
SMAD4-206ENST00000588860 CXCL1P09341 107 aa6.83□□□□□ -1.32
SMAD4-206ENST00000588860 NBEAP1P0C6P0 100 aa6.83□□□□□ -1.32
SMAD4-206ENST00000588860 FCGR2BP31994 310 aaPredicted RBP6.83□□□□□ -1.32
SMAD4-206ENST00000588860 GPR183P32249 361 aa6.83□□□□□ -1.32
SMAD4-206ENST00000588860 GNG4P50150 75 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms