RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CACFD1Q9UGQ2 172 aa13□□□□□ -0.33
CCDC43-204ENST00000588687 ZFP92A6NM28 416 aa12.99□□□□□ -0.33
CCDC43-204ENST00000588687 HBE1P02100 147 aa12.99□□□□□ -0.33
CCDC43-204ENST00000588687 HTN3P15516 51 aa12.99□□□□□ -0.33
CCDC43-204ENST00000588687 ID1P41134 155 aa12.99□□□□□ -0.33
CCDC43-204ENST00000588687 MRPS10P82664 201 aaKnown RBP12.99□□□□□ -0.33
CCDC43-204ENST00000588687 C1orf134Q5TEV5 83 aa12.99□□□□□ -0.33
CCDC43-204ENST00000588687 GOLT1BQ9Y3E0 138 aa12.99□□□□□ -0.33
CCDC43-204ENST00000588687 A0A0B4J2A0 478 aa12.98□□□□□ -0.33
CCDC43-204ENST00000588687 DISC1C4P0D8 188 aa12.98□□□□□ -0.33
CCDC43-204ENST00000588687 SMIM18P0DKX4 95 aa12.98□□□□□ -0.33
CCDC43-204ENST00000588687 GPX4P36969 197 aaPredicted RBP12.98□□□□□ -0.33
CCDC43-204ENST00000588687 CCR6P51684 374 aa12.98□□□□□ -0.33
CCDC43-204ENST00000588687 LYZP61626 148 aa12.98□□□□□ -0.33
CCDC43-204ENST00000588687 SMCO1Q147U7 214 aa12.98□□□□□ -0.33
CCDC43-204ENST00000588687 SOHLH1Q5JUK2 328 aa12.98□□□□□ -0.33
CCDC43-204ENST00000588687 LYZL2Q7Z4W2 148 aa12.98□□□□□ -0.33
CCDC43-204ENST00000588687 OR51S1Q8NGJ8 323 aa12.98□□□□□ -0.33
CCDC43-204ENST00000588687 SHPKQ9UHJ6 478 aa12.98□□□□□ -0.33
CCDC43-204ENST00000588687 AKAIN1P0CW23 69 aa12.97□□□□□ -0.33
CCDC43-204ENST00000588687 TNP2Q05952 138 aa12.97□□□□□ -0.33
CCDC43-204ENST00000588687 RRN3P1Q2M238 152 aa12.97□□□□□ -0.33
CCDC43-204ENST00000588687 PRRT1Q99946 306 aa12.97□□□□□ -0.33
CCDC43-204ENST00000588687 PFDN2Q9UHV9 154 aa12.97□□□□□ -0.33
CCDC43-204ENST00000588687 HERC1Q15751 4861 aa12.97□□□□□ -0.33
CCDC43-204ENST00000588687 CTDSP2O14595 271 aa12.96□□□□□ -0.33
CCDC43-204ENST00000588687 CTDSPLO15194 276 aa12.96□□□□□ -0.33
CCDC43-204ENST00000588687 CRXO43186 299 aaPredicted RBP12.96□□□□□ -0.33
CCDC43-204ENST00000588687 ALDH3B2P48448 385 aa12.96□□□□□ -0.33
CCDC43-204ENST00000588687 ATP5IP56385 69 aaPredicted RBP12.96□□□□□ -0.33
CCDC43-204ENST00000588687 FAM3BP58499 235 aaPredicted RBP12.96□□□□□ -0.33
CCDC43-204ENST00000588687 DAD1P61803 113 aa12.96□□□□□ -0.33
CCDC43-204ENST00000588687 THAP8Q8NA92 274 aa12.96□□□□□ -0.33
CCDC43-204ENST00000588687 SLC35E1Q96K37 410 aa12.96□□□□□ -0.33
CCDC43-204ENST00000588687 IGF2BP2-AS1Q96M15 143 aa12.96□□□□□ -0.33
CCDC43-204ENST00000588687 TRGV9Q99603 122 aa12.96□□□□□ -0.33
CCDC43-204ENST00000588687 SLC25A32Q9H2D1 315 aa12.96□□□□□ -0.33
CCDC43-204ENST00000588687 DOK5Q9P104 306 aa12.96□□□□□ -0.33
CCDC43-204ENST00000588687 PLAC8L1A1L4L8 177 aa12.95□□□□□ -0.34
CCDC43-204ENST00000588687 PRSS46E5RG02 174 aa12.95□□□□□ -0.34
CCDC43-204ENST00000588687 PITX3O75364 302 aa12.95□□□□□ -0.34
CCDC43-204ENST00000588687 CDK2AP2O75956 126 aa12.95□□□□□ -0.34
CCDC43-204ENST00000588687 PRM2P04554 102 aa12.95□□□□□ -0.34
CCDC43-204ENST00000588687 OR2F1Q13607 317 aa12.95□□□□□ -0.34
CCDC43-204ENST00000588687 EBLN2Q6P2I7 272 aa12.95□□□□□ -0.34
CCDC43-204ENST00000588687 C15orf53Q8NAA6 179 aa12.95□□□□□ -0.34
CCDC43-204ENST00000588687 C7orf50Q9BRJ6 194 aaKnown RBP12.95□□□□□ -0.34
CCDC43-204ENST00000588687 ANKRD20A5PA0PJZ0 165 aa12.94□□□□□ -0.34
CCDC43-204ENST00000588687 SAMD13Q5VXD3 122 aa12.94□□□□□ -0.34
CCDC43-204ENST00000588687 CLVS1Q8IUQ0 354 aaPredicted RBP12.94□□□□□ -0.34
CCDC43-204ENST00000588687 OR8I2Q8N0Y5 310 aa12.94□□□□□ -0.34
CCDC43-204ENST00000588687 ZNRF2Q8NHG8 242 aa12.94□□□□□ -0.34
CCDC43-204ENST00000588687 RPRMQ9NS64 109 aa12.94□□□□□ -0.34
CCDC43-204ENST00000588687 SNRPGP15A8MWD9 76 aa12.93□□□□□ -0.34
CCDC43-204ENST00000588687 RGS5O15539 181 aa12.93□□□□□ -0.34
CCDC43-204ENST00000588687 MEOX2P50222 304 aa12.93□□□□□ -0.34
CCDC43-204ENST00000588687 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.93□□□□□ -0.34
CCDC43-204ENST00000588687 MAGT1Q9H0U3 335 aa12.93□□□□□ -0.34
CCDC43-204ENST00000588687 KCNIP3Q9Y2W7 256 aa12.93□□□□□ -0.34
CCDC43-204ENST00000588687 LYRM9A8MSI8 78 aa12.92□□□□□ -0.34
CCDC43-204ENST00000588687 FABP1P07148 127 aa12.92□□□□□ -0.34
CCDC43-204ENST00000588687 SPCS2Q15005 226 aa12.92□□□□□ -0.34
CCDC43-204ENST00000588687 OR11H7Q8NGC8 314 aa12.92□□□□□ -0.34
CCDC43-204ENST00000588687 C16orf92Q96LL3 132 aa12.92□□□□□ -0.34
CCDC43-204ENST00000588687 SLC45A2Q9UMX9 530 aa12.92□□□□□ -0.34
CCDC43-204ENST00000588687 TRAV8-2A0A0B4J237 113 aa12.91□□□□□ -0.34
CCDC43-204ENST00000588687 NBDYA0A0U1RRE5 68 aa12.91□□□□□ -0.34
CCDC43-204ENST00000588687 ZNF98A6NK75 572 aa12.91□□□□□ -0.34
CCDC43-204ENST00000588687 ZNF705GA8MUZ8 300 aaPredicted RBP12.91□□□□□ -0.34
CCDC43-204ENST00000588687 C16orf90A8MZG2 172 aa12.91□□□□□ -0.34
CCDC43-204ENST00000588687 M0R2Z0 102 aa12.91□□□□□ -0.34
CCDC43-204ENST00000588687 TSPOP30536 169 aa12.91□□□□□ -0.34
CCDC43-204ENST00000588687 CNN1P51911 297 aaKnown RBP12.91□□□□□ -0.34
CCDC43-204ENST00000588687 SPINK13Q1W4C9 94 aa12.91□□□□□ -0.34
CCDC43-204ENST00000588687 TMEM182Q6ZP80 229 aaPredicted RBP12.91□□□□□ -0.34
CCDC43-204ENST00000588687 PPP1R14BQ96C90 147 aa12.91□□□□□ -0.34
CCDC43-204ENST00000588687 IAPPP10997 89 aa12.9□□□□□ -0.34
CCDC43-204ENST00000588687 AKR1C4P17516 323 aa12.9□□□□□ -0.34
CCDC43-204ENST00000588687 GALR1P47211 349 aa12.9□□□□□ -0.34
CCDC43-204ENST00000588687 SRPXP78539 464 aa12.9□□□□□ -0.34
CCDC43-204ENST00000588687 IL18Q14116 193 aa12.9□□□□□ -0.34
CCDC43-204ENST00000588687 BAP18Q8IXM2 172 aa12.9□□□□□ -0.34
CCDC43-204ENST00000588687 OR1S1Q8NH92 325 aa12.9□□□□□ -0.34
CCDC43-204ENST00000588687 TMED3Q9Y3Q3 217 aa12.9□□□□□ -0.34
CCDC43-204ENST00000588687 INSP01308 110 aa12.89□□□□□ -0.35
CCDC43-204ENST00000588687 C6orf223Q8N319 242 aa12.89□□□□□ -0.35
CCDC43-204ENST00000588687 OR4D5Q8NGN0 318 aa12.89□□□□□ -0.35
CCDC43-204ENST00000588687 TMEM208Q9BTX3 173 aa12.89□□□□□ -0.35
CCDC43-204ENST00000588687 RSG1Q9BU20 258 aa12.89□□□□□ -0.35
CCDC43-204ENST00000588687 SLC25A22Q9H936 323 aa12.89□□□□□ -0.35
CCDC43-204ENST00000588687 SCP2D1Q9UJQ7 156 aa12.89□□□□□ -0.35
CCDC43-204ENST00000588687 DUXBA0A1W2PPF3 345 aa12.88□□□□□ -0.35
CCDC43-204ENST00000588687 CFDP00746 253 aaPredicted RBP12.88□□□□□ -0.35
CCDC43-204ENST00000588687 AZU1P20160 251 aa12.88□□□□□ -0.35
CCDC43-204ENST00000588687 GATA2P23769 480 aaPredicted RBP12.88□□□□□ -0.35
CCDC43-204ENST00000588687 IGFL4Q6B9Z1 124 aa12.88□□□□□ -0.35
CCDC43-204ENST00000588687 RNF182Q8N6D2 247 aa12.88□□□□□ -0.35
CCDC43-204ENST00000588687 RAB11AP62491 216 aa12.87□□□□□ -0.35
CCDC43-204ENST00000588687 GGNBP1Q5YKI7 109 aa12.87□□□□□ -0.35
CCDC43-204ENST00000588687 MAPKAPK5-AS1Q8N8E1 139 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms