RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 GGCTO75223 188 aaKnown RBP15.41■□□□□ 0.06
ATG4D-208ENST00000588667 YIF1AO95070 293 aa15.41■□□□□ 0.06
ATG4D-208ENST00000588667 LINC00869P0C866 280 aa15.41■□□□□ 0.06
ATG4D-208ENST00000588667 ARL3P36405 182 aa15.41■□□□□ 0.06
ATG4D-208ENST00000588667 NPBWR1P48145 328 aa15.41■□□□□ 0.06
ATG4D-208ENST00000588667 KLF5Q13887 457 aaPredicted RBP15.41■□□□□ 0.06
ATG4D-208ENST00000588667 KPRPQ5T749 579 aaPredicted RBP15.41■□□□□ 0.06
ATG4D-208ENST00000588667 EIF4E3Q8N5X7 224 aaKnown RBP15.41■□□□□ 0.06
ATG4D-208ENST00000588667 MBD3L1Q8WWY6 194 aa15.41■□□□□ 0.06
ATG4D-208ENST00000588667 CTXND1A0A1B0GTU2 59 aa15.4■□□□□ 0.06
ATG4D-208ENST00000588667 CLN5O75503 358 aa15.4■□□□□ 0.06
ATG4D-208ENST00000588667 CLEC3BP05452 202 aa15.4■□□□□ 0.06
ATG4D-208ENST00000588667 GPR183P32249 361 aa15.4■□□□□ 0.06
ATG4D-208ENST00000588667 MFAP4P55083 255 aa15.4■□□□□ 0.06
ATG4D-208ENST00000588667 ZNF726P1Q15940 193 aa15.4■□□□□ 0.06
ATG4D-208ENST00000588667 BEAN1Q3B7T3 259 aa15.4■□□□□ 0.06
ATG4D-208ENST00000588667 C9orf66Q5T8R8 295 aa15.4■□□□□ 0.06
ATG4D-208ENST00000588667 FAM122CQ6P4D5 195 aa15.4■□□□□ 0.06
ATG4D-208ENST00000588667 A0A1W2PPV4 95 aa15.39■□□□□ 0.05
ATG4D-208ENST00000588667 WIPF1O43516 503 aa15.39■□□□□ 0.05
ATG4D-208ENST00000588667 FABP1P07148 127 aa15.39■□□□□ 0.05
ATG4D-208ENST00000588667 CDC34P49427 236 aaPredicted RBP15.39■□□□□ 0.05
ATG4D-208ENST00000588667 SYNJ2BPP57105 145 aa15.39■□□□□ 0.05
ATG4D-208ENST00000588667 SLC25A22Q9H936 323 aa15.39■□□□□ 0.05
ATG4D-208ENST00000588667 TRAV30A0A087WSZ9 112 aa15.39■□□□□ 0.05
ATG4D-208ENST00000588667 MAP1LC3B2A6NCE7 125 aa15.39■□□□□ 0.05
ATG4D-208ENST00000588667 SCGB2A1O75556 95 aa15.39■□□□□ 0.05
ATG4D-208ENST00000588667 IGLC1P0CG04 106 aa15.39■□□□□ 0.05
ATG4D-208ENST00000588667 S100A1P23297 94 aa15.39■□□□□ 0.05
ATG4D-208ENST00000588667 ZNF90Q03938 601 aa15.39■□□□□ 0.05
ATG4D-208ENST00000588667 GCSAMLQ5JQS6 135 aa15.39■□□□□ 0.05
ATG4D-208ENST00000588667 SPSB3Q6PJ21 355 aa15.39■□□□□ 0.05
ATG4D-208ENST00000588667 LCN15Q6UWW0 184 aa15.39■□□□□ 0.05
ATG4D-208ENST00000588667 MAP1LC3BQ9GZQ8 125 aa15.39■□□□□ 0.05
ATG4D-208ENST00000588667 GAR1Q9NY12 217 aaKnown RBP15.39■□□□□ 0.05
ATG4D-208ENST00000588667 A0A1B0GV50 99 aa15.38■□□□□ 0.05
ATG4D-208ENST00000588667 F8W735 103 aaPredicted RBP15.38■□□□□ 0.05
ATG4D-208ENST00000588667 GATA2P23769 480 aaPredicted RBP15.38■□□□□ 0.05
ATG4D-208ENST00000588667 FCGR2BP31994 310 aaPredicted RBP15.38■□□□□ 0.05
ATG4D-208ENST00000588667 INSL3P51460 131 aa15.38■□□□□ 0.05
ATG4D-208ENST00000588667 RHOBP62745 196 aa15.38■□□□□ 0.05
ATG4D-208ENST00000588667 UQCC3Q6UW78 93 aa15.38■□□□□ 0.05
ATG4D-208ENST00000588667 OR9G4Q8NGQ1 327 aa15.38■□□□□ 0.05
ATG4D-208ENST00000588667 RAB24Q969Q5 203 aa15.38■□□□□ 0.05
ATG4D-208ENST00000588667 TXN2Q99757 166 aa15.38■□□□□ 0.05
ATG4D-208ENST00000588667 MEGF8Q7Z7M0 2845 aa15.38■□□□□ 0.05
ATG4D-208ENST00000588667 SORL1Q92673 2214 aa15.37■□□□□ 0.05
ATG4D-208ENST00000588667 OR2T8A6NH00 312 aa15.37■□□□□ 0.05
ATG4D-208ENST00000588667 TGOLN2O43493 480 aa15.37■□□□□ 0.05
ATG4D-208ENST00000588667 GNG7O60262 68 aa15.37■□□□□ 0.05
ATG4D-208ENST00000588667 Q56UQ5 140 aa15.37■□□□□ 0.05
ATG4D-208ENST00000588667 SSX7Q7RTT5 188 aa15.37■□□□□ 0.05
ATG4D-208ENST00000588667 OR2C1O95371 312 aa15.36■□□□□ 0.05
ATG4D-208ENST00000588667 GPHB5Q86YW7 130 aa15.36■□□□□ 0.05
ATG4D-208ENST00000588667 PFDN5Q99471 154 aa15.36■□□□□ 0.05
ATG4D-208ENST00000588667 PBDC1Q9BVG4 233 aa15.36■□□□□ 0.05
ATG4D-208ENST00000588667 ELOVL1Q9BW60 279 aa15.36■□□□□ 0.05
ATG4D-208ENST00000588667 DNAH3Q8TD57 4116 aa15.36■□□□□ 0.05
ATG4D-208ENST00000588667 SAP30O75446 220 aa15.35■□□□□ 0.05
ATG4D-208ENST00000588667 OR1L4Q8NGR5 311 aa15.35■□□□□ 0.05
ATG4D-208ENST00000588667 GATAD1Q8WUU5 269 aa15.35■□□□□ 0.05
ATG4D-208ENST00000588667 RNF2Q99496 336 aa15.35■□□□□ 0.05
ATG4D-208ENST00000588667 PEMTQ9UBM1 199 aa15.35■□□□□ 0.05
ATG4D-208ENST00000588667 CCL20P78556 96 aa15.35■□□□□ 0.05
ATG4D-208ENST00000588667 EGFEM1PQ0D2K5 195 aa15.35■□□□□ 0.05
ATG4D-208ENST00000588667 TIGITQ495A1 244 aa15.35■□□□□ 0.05
ATG4D-208ENST00000588667 REC114Q7Z4M0 266 aa15.35■□□□□ 0.05
ATG4D-208ENST00000588667 FAM210AQ96ND0 272 aa15.35■□□□□ 0.05
ATG4D-208ENST00000588667 DNAJC4Q9NNZ3 241 aa15.35■□□□□ 0.05
ATG4D-208ENST00000588667 LGALS9O00182 355 aa15.34■□□□□ 0.05
ATG4D-208ENST00000588667 COX7A2P2O60397 106 aa15.34■□□□□ 0.05
ATG4D-208ENST00000588667 IGKV1-17P01599 117 aa15.34■□□□□ 0.05
ATG4D-208ENST00000588667 FGF8P55075 233 aaPredicted RBP15.34■□□□□ 0.05
ATG4D-208ENST00000588667 FAM106AQ4KMX7 169 aa15.34■□□□□ 0.05
ATG4D-208ENST00000588667 FAM78BQ5VT40 261 aa15.34■□□□□ 0.05
ATG4D-208ENST00000588667 SEPSECSQ9HD40 501 aaKnown RBP15.34■□□□□ 0.05
ATG4D-208ENST00000588667 FUT9Q9Y231 359 aa15.34■□□□□ 0.05
ATG4D-208ENST00000588667 ELOA3CA0A087WX78 387 aaPredicted RBP15.33■□□□□ 0.04
ATG4D-208ENST00000588667 HMGB3O15347 200 aaKnown RBP15.33■□□□□ 0.04
ATG4D-208ENST00000588667 OR5G3P0C626 314 aa15.33■□□□□ 0.04
ATG4D-208ENST00000588667 RD3LP0DJH9 198 aa15.33■□□□□ 0.04
ATG4D-208ENST00000588667 YPEL3P61236 119 aaPredicted RBP15.33■□□□□ 0.04
ATG4D-208ENST00000588667 GUK1Q16774 197 aa15.33■□□□□ 0.04
ATG4D-208ENST00000588667 CHRDL1Q9BU40 450 aa15.33■□□□□ 0.04
ATG4D-208ENST00000588667 MRPL32Q9BYC8 188 aaKnown RBP15.33■□□□□ 0.04
ATG4D-208ENST00000588667 ZMAT5Q9UDW3 170 aaKnown RBP15.33■□□□□ 0.04
ATG4D-208ENST00000588667 NUPL2O15504 423 aaKnown RBP15.32■□□□□ 0.04
ATG4D-208ENST00000588667 TOMM40O96008 361 aa15.32■□□□□ 0.04
ATG4D-208ENST00000588667 CTSGP08311 255 aa15.32■□□□□ 0.04
ATG4D-208ENST00000588667 PSG1P11464 419 aa15.32■□□□□ 0.04
ATG4D-208ENST00000588667 ADMP35318 185 aa15.32■□□□□ 0.04
ATG4D-208ENST00000588667 PLP1P60201 277 aa15.32■□□□□ 0.04
ATG4D-208ENST00000588667 DEFA6Q01524 100 aa15.32■□□□□ 0.04
ATG4D-208ENST00000588667 EIF5A2Q9GZV4 153 aaKnown RBP15.32■□□□□ 0.04
ATG4D-208ENST00000588667 SIGLEC8Q9NYZ4 499 aa15.32■□□□□ 0.04
ATG4D-208ENST00000588667 A8MWP6 167 aa15.32■□□□□ 0.04
ATG4D-208ENST00000588667 EIF3GO75821 320 aaKnown RBP eCLIP15.32■□□□□ 0.04
ATG4D-208ENST00000588667 CXorf1O96002 111 aa15.32■□□□□ 0.04
ATG4D-208ENST00000588667 STAG3L2P0CL84 134 aa15.32■□□□□ 0.04
ATG4D-208ENST00000588667 STAG3L3P0CL85 134 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms