RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 RBMY1EA6NEQ0 496 aaKnown RBP15.02■□□□□ -0
DDX39A-207ENST00000588542 RBMY1DP0C7P1 496 aaKnown RBP15.02■□□□□ -0
DDX39A-207ENST00000588542 EWSR1Q01844 656 aaKnown RBP eCLIP15.02■□□□□ -08e-7■□□□□ 11.3
DDX39A-207ENST00000588542 FAM24BQ8N5W8 94 aa15.02■□□□□ -0
DDX39A-207ENST00000588542 UQCC1Q9NVA1 299 aa15.02■□□□□ -0
DDX39A-207ENST00000588542 SLC45A2Q9UMX9 530 aa15.02■□□□□ -0
DDX39A-207ENST00000588542 TENM3Q9P273 2699 aa15.02□□□□□ -0.01
DDX39A-207ENST00000588542 HELTA6NFD8 242 aa15.01□□□□□ -0.01
DDX39A-207ENST00000588542 K7EQG2 157 aa15.01□□□□□ -0.01
DDX39A-207ENST00000588542 DNASE2O00115 360 aaPredicted RBP15.01□□□□□ -0.01
DDX39A-207ENST00000588542 AGPAT2O15120 278 aa15.01□□□□□ -0.01
DDX39A-207ENST00000588542 NHLRC4P0CG21 123 aaPredicted RBP15.01□□□□□ -0.01
DDX39A-207ENST00000588542 ORM2P19652 201 aa15.01□□□□□ -0.01
DDX39A-207ENST00000588542 NUP62P37198 522 aaPredicted RBP15.01□□□□□ -0.01
DDX39A-207ENST00000588542 PLP1P60201 277 aa15.01□□□□□ -0.01
DDX39A-207ENST00000588542 HBG1P69891 147 aa15.01□□□□□ -0.01
DDX39A-207ENST00000588542 HBG2P69892 147 aa15.01□□□□□ -0.01
DDX39A-207ENST00000588542 STXBP6Q8NFX7 210 aa15.01□□□□□ -0.01
DDX39A-207ENST00000588542 DCANP1Q8TF63 244 aa15.01□□□□□ -0.01
DDX39A-207ENST00000588542 TMEM147Q9BVK8 224 aa15.01□□□□□ -0.01
DDX39A-207ENST00000588542 SLC25A31Q9H0C2 315 aa15.01□□□□□ -0.01
DDX39A-207ENST00000588542 WDR83OSQ9Y284 106 aa15.01□□□□□ -0.01
DDX39A-207ENST00000588542 NBEAL2Q6ZNJ1 2754 aa15□□□□□ -0.01
DDX39A-207ENST00000588542 LINC00869P0C866 280 aa15□□□□□ -0.01
DDX39A-207ENST00000588542 PET100P0DJ07 73 aa15□□□□□ -0.01
DDX39A-207ENST00000588542 LYL1P12980 280 aa15□□□□□ -0.01
DDX39A-207ENST00000588542 ATP6V1FQ16864 119 aa15□□□□□ -0.01
DDX39A-207ENST00000588542 C1orf194Q5T5A4 169 aa15□□□□□ -0.01
DDX39A-207ENST00000588542 SIGLEC15Q6ZMC9 328 aa15□□□□□ -0.01
DDX39A-207ENST00000588542 OR1B1Q8NGR6 318 aa15□□□□□ -0.01
DDX39A-207ENST00000588542 MAP6D1Q9H9H5 199 aa15□□□□□ -0.01
DDX39A-207ENST00000588542 PFDN2Q9UHV9 154 aa15□□□□□ -0.01
DDX39A-207ENST00000588542 AP2S1P53680 142 aaPredicted RBP14.99□□□□□ -0.01
DDX39A-207ENST00000588542 HAGHQ16775 308 aa14.99□□□□□ -0.01
DDX39A-207ENST00000588542 ZNF546Q86UE3 836 aa14.99□□□□□ -0.01
DDX39A-207ENST00000588542 OR5C1Q8NGR4 320 aa14.99□□□□□ -0.01
DDX39A-207ENST00000588542 DOK5Q9P104 306 aa14.99□□□□□ -0.01
DDX39A-207ENST00000588542 MBD2Q9UBB5 411 aa14.99□□□□□ -0.01
DDX39A-207ENST00000588542 UBE2L5PA0A1B0GUS4 154 aa14.98□□□□□ -0.01
DDX39A-207ENST00000588542 ZNF98A6NK75 572 aa14.98□□□□□ -0.01
DDX39A-207ENST00000588542 BAXQ07812 192 aa14.98□□□□□ -0.01
DDX39A-207ENST00000588542 ZNF124Q15973 351 aa14.98□□□□□ -0.01
DDX39A-207ENST00000588542 PATE2Q6UY27 113 aa14.98□□□□□ -0.01
DDX39A-207ENST00000588542 APRG1Q8IVJ8 170 aa14.98□□□□□ -0.01
DDX39A-207ENST00000588542 PPP1R14BQ96C90 147 aa14.98□□□□□ -0.01
DDX39A-207ENST00000588542 TM2D3Q9BRN9 247 aa14.98□□□□□ -0.01
DDX39A-207ENST00000588542 H3BRN7 92 aa14.97□□□□□ -0.01
DDX39A-207ENST00000588542 HYPMO75409 117 aa14.97□□□□□ -0.01
DDX39A-207ENST00000588542 CAMLGP49069 296 aa14.97□□□□□ -0.01
DDX39A-207ENST00000588542 CMC4P56277 68 aaPredicted RBP14.97□□□□□ -0.01
DDX39A-207ENST00000588542 GGTLC1Q9BX51 225 aa14.97□□□□□ -0.01
DDX39A-207ENST00000588542 ARL6Q9H0F7 186 aa14.97□□□□□ -0.01
DDX39A-207ENST00000588542 NRN1Q9NPD7 142 aa14.97□□□□□ -0.01
DDX39A-207ENST00000588542 FBXL17Q9UF56 701 aa14.97□□□□□ -0.01
DDX39A-207ENST00000588542 AGRNO00468 2067 aa14.97□□□□□ -0.01
DDX39A-207ENST00000588542 PRR20EP86478 221 aa14.96□□□□□ -0.01
DDX39A-207ENST00000588542 PRR20CP86479 221 aa14.96□□□□□ -0.01
DDX39A-207ENST00000588542 PRR20DP86480 221 aa14.96□□□□□ -0.01
DDX39A-207ENST00000588542 PRR20BP86481 221 aa14.96□□□□□ -0.01
DDX39A-207ENST00000588542 PRR20AP86496 221 aa14.96□□□□□ -0.01
DDX39A-207ENST00000588542 OR8I2Q8N0Y5 310 aa14.96□□□□□ -0.01
DDX39A-207ENST00000588542 CHAC2Q8WUX2 184 aa14.96□□□□□ -0.01
DDX39A-207ENST00000588542 SHANK2-AS3Q9BTD1 123 aa14.96□□□□□ -0.01
DDX39A-207ENST00000588542 SCRT1Q9BWW7 348 aa14.96□□□□□ -0.01
DDX39A-207ENST00000588542 SLC25A39Q9BZJ4 359 aaPredicted RBP14.96□□□□□ -0.01
DDX39A-207ENST00000588542 SLC25A32Q9H2D1 315 aa14.96□□□□□ -0.01
DDX39A-207ENST00000588542 HIGD1AQ9Y241 93 aa14.96□□□□□ -0.01
DDX39A-207ENST00000588542 HSPB11Q9Y547 144 aa14.96□□□□□ -0.01
DDX39A-207ENST00000588542 GIPP09681 153 aaPredicted RBP14.95□□□□□ -0.02
DDX39A-207ENST00000588542 OR5G3P0C626 314 aa14.95□□□□□ -0.02
DDX39A-207ENST00000588542 RPL12P30050 165 aaKnown RBP14.95□□□□□ -0.02
DDX39A-207ENST00000588542 DEFB131AP59861 70 aa14.95□□□□□ -0.02
DDX39A-207ENST00000588542 RAB31Q13636 194 aa14.95□□□□□ -0.02
DDX39A-207ENST00000588542 OPCMLQ14982 345 aa14.95□□□□□ -0.02
DDX39A-207ENST00000588542 Q5BKY6 102 aa14.95□□□□□ -0.02
DDX39A-207ENST00000588542 PXDC1Q5TGL8 231 aa14.95□□□□□ -0.02
DDX39A-207ENST00000588542 MIC13Q5XKP0 118 aa14.95□□□□□ -0.02
DDX39A-207ENST00000588542 LEMD1Q68G75 181 aa14.95□□□□□ -0.02
DDX39A-207ENST00000588542 C17orf77Q96MU5 243 aa14.95□□□□□ -0.02
DDX39A-207ENST00000588542 UHRF2Q96PU4 802 aa14.95□□□□□ -0.02
DDX39A-207ENST00000588542 SLC25A22Q9H936 323 aa14.95□□□□□ -0.02
DDX39A-207ENST00000588542 STAB2Q8WWQ8 2551 aa14.95□□□□□ -0.02
DDX39A-207ENST00000588542 LOC102724200A0A096LPH7 203 aaPredicted RBP14.94□□□□□ -0.02
DDX39A-207ENST00000588542 ZNF688P0C7X2 276 aa14.94□□□□□ -0.02
DDX39A-207ENST00000588542 FGF7P21781 194 aa14.94□□□□□ -0.02
DDX39A-207ENST00000588542 RPL29P47914 159 aaKnown RBP14.94□□□□□ -0.02
DDX39A-207ENST00000588542 RAP2BP61225 183 aa14.94□□□□□ -0.02
DDX39A-207ENST00000588542 CLINT1Q14677 625 aa14.94□□□□□ -0.02
DDX39A-207ENST00000588542 THAP6Q8TBB0 222 aa14.94□□□□□ -0.02
DDX39A-207ENST00000588542 ASB13Q8WXK3 278 aa14.94□□□□□ -0.02
DDX39A-207ENST00000588542 ARV1Q9H2C2 271 aa14.94□□□□□ -0.02
DDX39A-207ENST00000588542 MPDU1O75352 247 aa14.93□□□□□ -0.02
DDX39A-207ENST00000588542 TMEM37Q8WXS4 190 aa14.93□□□□□ -0.02
DDX39A-207ENST00000588542 SOCS3O14543 225 aa14.92□□□□□ -0.02
DDX39A-207ENST00000588542 S100A7P31151 101 aa14.92□□□□□ -0.02
DDX39A-207ENST00000588542 NPCDR1Q9BY65 106 aa14.92□□□□□ -0.02
DDX39A-207ENST00000588542 SEPSECSQ9HD40 501 aaKnown RBP14.92□□□□□ -0.02
DDX39A-207ENST00000588542 U3KQK5 164 aa14.92□□□□□ -0.02
DDX39A-207ENST00000588542 GPR82Q96P67 336 aa14.91□□□□□ -0.02
DDX39A-207ENST00000588542 ATP5SQ99766 215 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms