RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 GRAMD2BQ96HH9 432 aa11.31□□□□□ -0.6
CALR-204ENST00000586967 SH3BGRL3Q9H299 93 aa11.31□□□□□ -0.6
CALR-204ENST00000586967 ZFAND3Q9H8U3 227 aa11.31□□□□□ -0.6
CALR-204ENST00000586967 IGHV3-35A0A0C4DH35 117 aa11.3□□□□□ -0.6
CALR-204ENST00000586967 ADARB2-AS1A8MUL3 147 aa11.3□□□□□ -0.6
CALR-204ENST00000586967 A8MWP6 167 aa11.3□□□□□ -0.6
CALR-204ENST00000586967 GATA2P23769 480 aaPredicted RBP11.3□□□□□ -0.6
CALR-204ENST00000586967 TAS2R45P59539 299 aa11.3□□□□□ -0.6
CALR-204ENST00000586967 TEX261Q6UWH6 196 aa11.3□□□□□ -0.6
CALR-204ENST00000586967 OR10G4Q8NGN3 311 aa11.3□□□□□ -0.6
CALR-204ENST00000586967 OR10G9Q8NGN4 311 aa11.3□□□□□ -0.6
CALR-204ENST00000586967 OR10G7Q8NGN6 311 aa11.3□□□□□ -0.6
CALR-204ENST00000586967 RNF141Q8WVD5 230 aa11.3□□□□□ -0.6
CALR-204ENST00000586967 ELOVL1Q9BW60 279 aa11.3□□□□□ -0.6
CALR-204ENST00000586967 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
CALR-204ENST00000586967 SETD2Q9BYW2 2564 aaPredicted RBP11.29□□□□□ -0.6
CALR-204ENST00000586967 SYNJ2BPP57105 145 aa11.29□□□□□ -0.6
CALR-204ENST00000586967 MRPL27Q9P0M9 148 aaKnown RBP11.29□□□□□ -0.6
CALR-204ENST00000586967 TEX46H3BTG2 121 aa11.28□□□□□ -0.6
CALR-204ENST00000586967 CD5P06127 495 aa11.28□□□□□ -0.6
CALR-204ENST00000586967 CRYBB3P26998 211 aa11.28□□□□□ -0.6
CALR-204ENST00000586967 SULT1A2P50226 295 aa11.28□□□□□ -0.6
CALR-204ENST00000586967 SLURP1P55000 103 aa11.28□□□□□ -0.6
CALR-204ENST00000586967 RAB2AP61019 212 aa11.28□□□□□ -0.6
CALR-204ENST00000586967 USF2Q15853 346 aaPredicted RBP11.28□□□□□ -0.6
CALR-204ENST00000586967 C1orf194Q5T5A4 169 aa11.28□□□□□ -0.6
CALR-204ENST00000586967 FAM78BQ5VT40 261 aa11.28□□□□□ -0.6
CALR-204ENST00000586967 ALKAL2Q6UX46 152 aa11.28□□□□□ -0.6
CALR-204ENST00000586967 LINC00305Q7Z4B0 112 aa11.28□□□□□ -0.6
CALR-204ENST00000586967 STXBP6Q8NFX7 210 aa11.28□□□□□ -0.6
CALR-204ENST00000586967 OR9G4Q8NGQ1 327 aa11.28□□□□□ -0.6
CALR-204ENST00000586967 RCC1LQ96I51 464 aaKnown RBP11.28□□□□□ -0.6
CALR-204ENST00000586967 GPR82Q96P67 336 aa11.28□□□□□ -0.6
CALR-204ENST00000586967 DOK5Q9P104 306 aa11.28□□□□□ -0.6
CALR-204ENST00000586967 UBQLN2Q9UHD9 624 aa11.28□□□□□ -0.6
CALR-204ENST00000586967 OVOL1O14753 267 aa11.27□□□□□ -0.61
CALR-204ENST00000586967 CDC34P49427 236 aaPredicted RBP11.27□□□□□ -0.61
CALR-204ENST00000586967 KHDC3LQ587J8 217 aa11.27□□□□□ -0.61
CALR-204ENST00000586967 UNQ9165/PRO28630Q6UXU0 137 aa11.27□□□□□ -0.61
CALR-204ENST00000586967 ZNF767PQ75MW2 155 aa11.27□□□□□ -0.61
CALR-204ENST00000586967 DUX3Q96PT4 197 aa11.27□□□□□ -0.61
CALR-204ENST00000586967 SLC25A39Q9BZJ4 359 aaPredicted RBP11.27□□□□□ -0.61
CALR-204ENST00000586967 FUT9Q9Y231 359 aa11.27□□□□□ -0.61
CALR-204ENST00000586967 IGHV7-4-1A0A0J9YVY3 117 aa11.26□□□□□ -0.61
CALR-204ENST00000586967 CTXND1A0A1B0GTU2 59 aa11.26□□□□□ -0.61
CALR-204ENST00000586967 SEC14L6B5MCN3 397 aa11.26□□□□□ -0.61
CALR-204ENST00000586967 BLOC1S1P78537 153 aa11.26□□□□□ -0.61
CALR-204ENST00000586967 KRTAP21-3Q3LHN1 58 aa11.26□□□□□ -0.61
CALR-204ENST00000586967 FAM122CQ6P4D5 195 aa11.26□□□□□ -0.61
CALR-204ENST00000586967 ZNF680Q8NEM1 530 aa11.26□□□□□ -0.61
CALR-204ENST00000586967 TMEM37Q8WXS4 190 aa11.26□□□□□ -0.61
CALR-204ENST00000586967 DLX4Q92988 240 aaPredicted RBP11.26□□□□□ -0.61
CALR-204ENST00000586967 SHANK2-AS3Q9BTD1 123 aa11.26□□□□□ -0.61
CALR-204ENST00000586967 RPRMQ9NS64 109 aa11.26□□□□□ -0.61
CALR-204ENST00000586967 TECRQ9NZ01 308 aaKnown RBP11.26□□□□□ -0.61
CALR-204ENST00000586967 ATRQ13535 2644 aa11.25□□□□□ -0.61
CALR-204ENST00000586967 ZNF98A6NK75 572 aa11.25□□□□□ -0.61
CALR-204ENST00000586967 H3BRN7 92 aa11.25□□□□□ -0.61
CALR-204ENST00000586967 C8orf88P0DMB2 117 aa11.25□□□□□ -0.61
CALR-204ENST00000586967 RPL7P18124 248 aaKnown RBP11.25□□□□□ -0.61
CALR-204ENST00000586967 RAB14P61106 215 aa11.25□□□□□ -0.61
CALR-204ENST00000586967 PATE2Q6UY27 113 aa11.25□□□□□ -0.61
CALR-204ENST00000586967 PQLC2Q6ZP29 291 aa11.25□□□□□ -0.61
CALR-204ENST00000586967 BPIFA4PQ86YQ2 179 aa11.25□□□□□ -0.61
CALR-204ENST00000586967 FAM213BQ8TBF2 198 aa11.25□□□□□ -0.61
CALR-204ENST00000586967 SAT2Q96F10 170 aaPredicted RBP11.25□□□□□ -0.61
CALR-204ENST00000586967 MCRIP2Q9BUT9 160 aaKnown RBP11.25□□□□□ -0.61
CALR-204ENST00000586967 SIGLEC8Q9NYZ4 499 aa11.25□□□□□ -0.61
CALR-204ENST00000586967 SMPXQ9UHP9 88 aa11.25□□□□□ -0.61
CALR-204ENST00000586967 IGHV3OR16-8A0A075B7F1 116 aa11.24□□□□□ -0.61
CALR-204ENST00000586967 HELTA6NFD8 242 aa11.24□□□□□ -0.61
CALR-204ENST00000586967 C2orf70A6NJV1 201 aa11.24□□□□□ -0.61
CALR-204ENST00000586967 ZNF705EA8MWA4 302 aaPredicted RBP11.24□□□□□ -0.61
CALR-204ENST00000586967 HBE1P02100 147 aa11.24□□□□□ -0.61
CALR-204ENST00000586967 GALR1P47211 349 aa11.24□□□□□ -0.61
CALR-204ENST00000586967 TM4SF20Q53R12 229 aa11.24□□□□□ -0.61
CALR-204ENST00000586967 GCSAMLQ5JQS6 135 aa11.24□□□□□ -0.61
CALR-204ENST00000586967 HIST2H2BDQ6DRA6 164 aa11.24□□□□□ -0.61
CALR-204ENST00000586967 OR8I2Q8N0Y5 310 aa11.24□□□□□ -0.61
CALR-204ENST00000586967 RPP25LQ8N5L8 163 aaKnown RBP11.24□□□□□ -0.61
CALR-204ENST00000586967 ZNF414Q96IQ9 312 aa11.24□□□□□ -0.61
CALR-204ENST00000586967 UHRF2Q96PU4 802 aa11.24□□□□□ -0.61
CALR-204ENST00000586967 VSIRQ9H7M9 311 aa11.24□□□□□ -0.61
CALR-204ENST00000586967 SEPSECSQ9HD40 501 aaKnown RBP11.24□□□□□ -0.61
CALR-204ENST00000586967 RFNGQ9Y644 331 aa11.24□□□□□ -0.61
CALR-204ENST00000586967 U3KQE9 123 aa11.24□□□□□ -0.61
CALR-204ENST00000586967 TMEM213A2RRL7 107 aa11.23□□□□□ -0.61
CALR-204ENST00000586967 ZNF207O43670 478 aaKnown RBP11.23□□□□□ -0.61
CALR-204ENST00000586967 BUB3O43684 328 aa11.23□□□□□ -0.61
CALR-204ENST00000586967 CXorf1O96002 111 aa11.23□□□□□ -0.61
CALR-204ENST00000586967 H2AFB1P0C5Y9 115 aa11.23□□□□□ -0.61
CALR-204ENST00000586967 CBLN1P23435 193 aa11.23□□□□□ -0.61
CALR-204ENST00000586967 MEOX2P50222 304 aa11.23□□□□□ -0.61
CALR-204ENST00000586967 LINC00482Q8N8I6 264 aa11.23□□□□□ -0.61
CALR-204ENST00000586967 DYNLRB2Q8TF09 96 aa11.23□□□□□ -0.61
CALR-204ENST00000586967 RAB24Q969Q5 203 aa11.23□□□□□ -0.61
CALR-204ENST00000586967 RHPN1-AS1Q9BWJ2 59 aa11.23□□□□□ -0.61
CALR-204ENST00000586967 GPR61Q9BZJ8 451 aa11.23□□□□□ -0.61
CALR-204ENST00000586967 SLC25A22Q9H936 323 aa11.23□□□□□ -0.61
CALR-204ENST00000586967 CHEK1O14757 476 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms