RNA–Protein interactions for RNA: ENST00000586435.1

LIG3-209, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-209ENST00000586435 CTDSP2O14595 271 aa8.43□□□□□ -1.06
LIG3-209ENST00000586435 HBE1P02100 147 aa8.43□□□□□ -1.06
LIG3-209ENST00000586435 MEOX2P50222 304 aa8.43□□□□□ -1.06
LIG3-209ENST00000586435 LYZP61626 148 aa8.43□□□□□ -1.06
LIG3-209ENST00000586435 SRPXP78539 464 aa8.43□□□□□ -1.06
LIG3-209ENST00000586435 PSG9Q00887 426 aa8.43□□□□□ -1.06
LIG3-209ENST00000586435 ZNF90Q03938 601 aa8.43□□□□□ -1.06
LIG3-209ENST00000586435 SOHLH1Q5JUK2 328 aa8.43□□□□□ -1.06
LIG3-209ENST00000586435 EBLN2Q6P2I7 272 aa8.43□□□□□ -1.06
LIG3-209ENST00000586435 CLVS1Q8IUQ0 354 aaPredicted RBP8.43□□□□□ -1.06
LIG3-209ENST00000586435 C1orf158Q8N1D5 194 aa8.43□□□□□ -1.06
LIG3-209ENST00000586435 OR4B1Q8NGF8 309 aa8.43□□□□□ -1.06
LIG3-209ENST00000586435 TRGV9Q99603 122 aa8.43□□□□□ -1.06
LIG3-209ENST00000586435 SLC35B3Q9H1N7 401 aa8.43□□□□□ -1.06
LIG3-209ENST00000586435 PRR13Q9NZ81 148 aa8.43□□□□□ -1.06
LIG3-209ENST00000586435 SCP2D1Q9UJQ7 156 aa8.43□□□□□ -1.06
LIG3-209ENST00000586435 DYNC1H1Q14204 4646 aaKnown RBP8.43□□□□□ -1.06
LIG3-209ENST00000586435 PKD1P98161 4303 aa8.42□□□□□ -1.06
LIG3-209ENST00000586435 A0A0J9YX75 114 aa8.42□□□□□ -1.06
LIG3-209ENST00000586435 LOC102723971A0A1B0GUV8 181 aa8.42□□□□□ -1.06
LIG3-209ENST00000586435 DUXBA0A1W2PPF3 345 aa8.42□□□□□ -1.06
LIG3-209ENST00000586435 CFDP00746 253 aaPredicted RBP8.42□□□□□ -1.06
LIG3-209ENST00000586435 ALDH3B2P48448 385 aa8.42□□□□□ -1.06
LIG3-209ENST00000586435 FAM3BP58499 235 aaPredicted RBP8.42□□□□□ -1.06
LIG3-209ENST00000586435 IL18Q14116 193 aa8.42□□□□□ -1.06
LIG3-209ENST00000586435 RRN3P1Q2M238 152 aa8.42□□□□□ -1.06
LIG3-209ENST00000586435 FAM78BQ5VT40 261 aa8.42□□□□□ -1.06
LIG3-209ENST00000586435 LYZL2Q7Z4W2 148 aa8.42□□□□□ -1.06
LIG3-209ENST00000586435 OR8I2Q8N0Y5 310 aa8.42□□□□□ -1.06
LIG3-209ENST00000586435 THAP8Q8NA92 274 aa8.42□□□□□ -1.06
LIG3-209ENST00000586435 RPRMQ9NS64 109 aa8.42□□□□□ -1.06
LIG3-209ENST00000586435 SLC45A2Q9UMX9 530 aa8.42□□□□□ -1.06
LIG3-209ENST00000586435 YTHDF2Q9Y5A9 579 aaKnown RBP8.42□□□□□ -1.06
LIG3-209ENST00000586435 RYR1P21817 5038 aa8.41□□□□□ -1.06
LIG3-209ENST00000586435 IGLV2-18A0A075B6J9 118 aa8.41□□□□□ -1.06
LIG3-209ENST00000586435 PITX3O75364 302 aa8.41□□□□□ -1.06
LIG3-209ENST00000586435 ANXA3P12429 323 aa8.41□□□□□ -1.06
LIG3-209ENST00000586435 AKR1C4P17516 323 aa8.41□□□□□ -1.06
LIG3-209ENST00000586435 C15orf53Q8NAA6 179 aa8.41□□□□□ -1.06
LIG3-209ENST00000586435 OR1S1Q8NH92 325 aa8.41□□□□□ -1.06
LIG3-209ENST00000586435 DIRAS2Q96HU8 199 aa8.41□□□□□ -1.06
LIG3-209ENST00000586435 C7orf50Q9BRJ6 194 aaKnown RBP8.41□□□□□ -1.06
LIG3-209ENST00000586435 DOK5Q9P104 306 aa8.41□□□□□ -1.06
LIG3-209ENST00000586435 IGKV1OR2-108A0A075B7D4 117 aa8.4□□□□□ -1.06
LIG3-209ENST00000586435 F6UB75 175 aa8.4□□□□□ -1.06
LIG3-209ENST00000586435 SLC25A6P12236 298 aa8.4□□□□□ -1.06
LIG3-209ENST00000586435 GALR1P47211 349 aa8.4□□□□□ -1.06
LIG3-209ENST00000586435 DAD1P61803 113 aa8.4□□□□□ -1.06
LIG3-209ENST00000586435 RAB11AP62491 216 aa8.4□□□□□ -1.06
LIG3-209ENST00000586435 SPCS2Q15005 226 aa8.4□□□□□ -1.06
LIG3-209ENST00000586435 AMTNQ6UX39 209 aa8.4□□□□□ -1.06
LIG3-209ENST00000586435 PPP1R14BQ96C90 147 aa8.4□□□□□ -1.06
LIG3-209ENST00000586435 IGF2BP2-AS1Q96M15 143 aa8.4□□□□□ -1.06
LIG3-209ENST00000586435 CCDC59Q9P031 241 aaKnown RBP8.4□□□□□ -1.06
LIG3-209ENST00000586435 HTN3P15516 51 aa8.39□□□□□ -1.07
LIG3-209ENST00000586435 OR2F1Q13607 317 aa8.39□□□□□ -1.07
LIG3-209ENST00000586435 C1orf134Q5TEV5 83 aa8.39□□□□□ -1.07
LIG3-209ENST00000586435 GGNBP1Q5YKI7 109 aa8.39□□□□□ -1.07
LIG3-209ENST00000586435 TMEM88Q6PEY1 159 aa8.39□□□□□ -1.07
LIG3-209ENST00000586435 GPR141Q7Z602 305 aa8.39□□□□□ -1.07
LIG3-209ENST00000586435 LRTM2Q8N967 370 aa8.39□□□□□ -1.07
LIG3-209ENST00000586435 OR4D5Q8NGN0 318 aa8.39□□□□□ -1.07
LIG3-209ENST00000586435 C16orf92Q96LL3 132 aa8.39□□□□□ -1.07
LIG3-209ENST00000586435 C20orf173Q96LM9 149 aa8.39□□□□□ -1.07
LIG3-209ENST00000586435 C17orf77Q96MU5 243 aa8.39□□□□□ -1.07
LIG3-209ENST00000586435 GPR82Q96P67 336 aa8.39□□□□□ -1.07
LIG3-209ENST00000586435 MAGT1Q9H0U3 335 aa8.39□□□□□ -1.07
LIG3-209ENST00000586435 SLC25A32Q9H2D1 315 aa8.39□□□□□ -1.07
LIG3-209ENST00000586435 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
LIG3-209ENST00000586435 RSL24D1Q9UHA3 163 aaKnown RBP8.39□□□□□ -1.07
LIG3-209ENST00000586435 ZNF98A6NK75 572 aa8.38□□□□□ -1.07
LIG3-209ENST00000586435 LYRM9A8MSI8 78 aa8.38□□□□□ -1.07
LIG3-209ENST00000586435 PRSS46E5RG02 174 aa8.38□□□□□ -1.07
LIG3-209ENST00000586435 S100A7P31151 101 aa8.38□□□□□ -1.07
LIG3-209ENST00000586435 B2MP61769 119 aa8.38□□□□□ -1.07
LIG3-209ENST00000586435 ZNF575Q86XF7 245 aa8.38□□□□□ -1.07
LIG3-209ENST00000586435 DYNC2LI1Q8TCX1 351 aa8.38□□□□□ -1.07
LIG3-209ENST00000586435 CIB3Q96Q77 187 aaPredicted RBP8.38□□□□□ -1.07
LIG3-209ENST00000586435 BCL7BQ9BQE9 202 aa8.38□□□□□ -1.07
LIG3-209ENST00000586435 MRPS26Q9BYN8 205 aaKnown RBP8.38□□□□□ -1.07
LIG3-209ENST00000586435 MCUBQ9NWR8 336 aa8.38□□□□□ -1.07
LIG3-209ENST00000586435 CRXO43186 299 aaPredicted RBP8.37□□□□□ -1.07
LIG3-209ENST00000586435 MED6O75586 246 aa8.37□□□□□ -1.07
LIG3-209ENST00000586435 DUSP14O95147 198 aaKnown RBP8.37□□□□□ -1.07
LIG3-209ENST00000586435 INSP01308 110 aa8.37□□□□□ -1.07
LIG3-209ENST00000586435 IAPPP10997 89 aa8.37□□□□□ -1.07
LIG3-209ENST00000586435 TSPOP30536 169 aa8.37□□□□□ -1.07
LIG3-209ENST00000586435 RPP30P78346 268 aaKnown RBP8.37□□□□□ -1.07
LIG3-209ENST00000586435 TMEM128Q5BJH2 165 aa8.37□□□□□ -1.07
LIG3-209ENST00000586435 GSG1LQ6UXU4 331 aa8.37□□□□□ -1.07
LIG3-209ENST00000586435 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.37□□□□□ -1.07
LIG3-209ENST00000586435 BPIFCQ8NFQ6 507 aa8.37□□□□□ -1.07
LIG3-209ENST00000586435 OR11H7Q8NGC8 314 aa8.37□□□□□ -1.07
LIG3-209ENST00000586435 OR1B1Q8NGR6 318 aa8.37□□□□□ -1.07
LIG3-209ENST00000586435 RAB2BQ8WUD1 216 aa8.37□□□□□ -1.07
LIG3-209ENST00000586435 SOSTQ9BQB4 213 aa8.37□□□□□ -1.07
LIG3-209ENST00000586435 TMEM208Q9BTX3 173 aa8.37□□□□□ -1.07
LIG3-209ENST00000586435 RSG1Q9BU20 258 aa8.37□□□□□ -1.07
LIG3-209ENST00000586435 TMED3Q9Y3Q3 217 aa8.37□□□□□ -1.07
LIG3-209ENST00000586435 FAUP35544 74 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms