RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 SAT2Q96F10 170 aaPredicted RBP12.35□□□□□ -0.43
SS18-226ENST00000585241 RAX2Q96IS3 184 aa12.35□□□□□ -0.43
SS18-226ENST00000585241 DOK5Q9P104 306 aa12.35□□□□□ -0.43
SS18-226ENST00000585241 FUT9Q9Y231 359 aa12.35□□□□□ -0.43
SS18-226ENST00000585241 HIGD1AQ9Y241 93 aa12.35□□□□□ -0.43
SS18-226ENST00000585241 A0A1W2PRX2 142 aa12.34□□□□□ -0.43
SS18-226ENST00000585241 H3BRN7 92 aa12.34□□□□□ -0.43
SS18-226ENST00000585241 K7EMT4 169 aa12.34□□□□□ -0.43
SS18-226ENST00000585241 CDC34P49427 236 aaPredicted RBP12.34□□□□□ -0.43
SS18-226ENST00000585241 FHITP49789 147 aa12.34□□□□□ -0.43
SS18-226ENST00000585241 RHOBP62745 196 aa12.34□□□□□ -0.43
SS18-226ENST00000585241 C1QL4Q86Z23 238 aa12.34□□□□□ -0.43
SS18-226ENST00000585241 DPF1Q92782 380 aa12.34□□□□□ -0.43
SS18-226ENST00000585241 ZNF747Q9BV97 191 aa12.34□□□□□ -0.43
SS18-226ENST00000585241 PBDC1Q9BVG4 233 aa12.34□□□□□ -0.43
SS18-226ENST00000585241 ACTR3CQ9C0K3 210 aaPredicted RBP12.34□□□□□ -0.43
SS18-226ENST00000585241 SEPSECSQ9HD40 501 aaKnown RBP12.34□□□□□ -0.43
SS18-226ENST00000585241 U3KQE9 123 aa12.34□□□□□ -0.43
SS18-226ENST00000585241 CTXND1A0A1B0GTU2 59 aa12.33□□□□□ -0.44
SS18-226ENST00000585241 CCL24O00175 119 aa12.33□□□□□ -0.44
SS18-226ENST00000585241 CRYBB3P26998 211 aa12.33□□□□□ -0.44
SS18-226ENST00000585241 MYCNOSP40205 109 aa12.33□□□□□ -0.44
SS18-226ENST00000585241 FAM78BQ5VT40 261 aa12.33□□□□□ -0.44
SS18-226ENST00000585241 SPATA31B1PQ5VZV4 182 aa12.33□□□□□ -0.44
SS18-226ENST00000585241 FAM122CQ6P4D5 195 aa12.33□□□□□ -0.44
SS18-226ENST00000585241 S100A7AQ86SG5 101 aa12.33□□□□□ -0.44
SS18-226ENST00000585241 FAM213BQ8TBF2 198 aa12.33□□□□□ -0.44
SS18-226ENST00000585241 MBD3L1Q8WWY6 194 aa12.33□□□□□ -0.44
SS18-226ENST00000585241 SHANK2-AS3Q9BTD1 123 aa12.33□□□□□ -0.44
SS18-226ENST00000585241 SLC25A39Q9BZJ4 359 aaPredicted RBP12.33□□□□□ -0.44
SS18-226ENST00000585241 TECRQ9NZ01 308 aaKnown RBP12.33□□□□□ -0.44
SS18-226ENST00000585241 RABAC1Q9UI14 185 aa12.33□□□□□ -0.44
SS18-226ENST00000585241 ZNF705EA8MWA4 302 aaPredicted RBP12.32□□□□□ -0.44
SS18-226ENST00000585241 NMBP08949 121 aa12.32□□□□□ -0.44
SS18-226ENST00000585241 S100A7P31151 101 aa12.32□□□□□ -0.44
SS18-226ENST00000585241 SLURP1P55000 103 aa12.32□□□□□ -0.44
SS18-226ENST00000585241 BLOC1S1P78537 153 aa12.32□□□□□ -0.44
SS18-226ENST00000585241 MIR17HGQ75NE6 70 aa12.32□□□□□ -0.44
SS18-226ENST00000585241 SSX7Q7RTT5 188 aa12.32□□□□□ -0.44
SS18-226ENST00000585241 LINC00305Q7Z4B0 112 aa12.32□□□□□ -0.44
SS18-226ENST00000585241 RAB24Q969Q5 203 aa12.32□□□□□ -0.44
SS18-226ENST00000585241 UHRF2Q96PU4 802 aa12.32□□□□□ -0.44
SS18-226ENST00000585241 METTL26Q96S19 204 aa12.32□□□□□ -0.44
SS18-226ENST00000585241 SLC25A22Q9H936 323 aa12.32□□□□□ -0.44
SS18-226ENST00000585241 DAZ1Q9NQZ3 744 aaKnown RBP12.32□□□□□ -0.44
SS18-226ENST00000585241 UFC1Q9Y3C8 167 aa12.32□□□□□ -0.44
SS18-226ENST00000585241 FBN1P35555 2871 aaKnown RBP12.31□□□□□ -0.44
SS18-226ENST00000585241 TRAV1-1A0A0B4J248 108 aa12.31□□□□□ -0.44
SS18-226ENST00000585241 A0A1W2PPV4 95 aa12.31□□□□□ -0.44
SS18-226ENST00000585241 STAG3L2P0CL84 134 aa12.31□□□□□ -0.44
SS18-226ENST00000585241 STAG3L3P0CL85 134 aa12.31□□□□□ -0.44
SS18-226ENST00000585241 NSUN5P1Q3KNT7 163 aa12.31□□□□□ -0.44
SS18-226ENST00000585241 CLLU1Q5K131 121 aa12.31□□□□□ -0.44
SS18-226ENST00000585241 MORN5Q5VZ52 161 aa12.31□□□□□ -0.44
SS18-226ENST00000585241 LYPD6BQ8NI32 183 aa12.31□□□□□ -0.44
SS18-226ENST00000585241 FAM167A-AS1Q96KT0 104 aa12.31□□□□□ -0.44
SS18-226ENST00000585241 DUX3Q96PT4 197 aa12.31□□□□□ -0.44
SS18-226ENST00000585241 C20orf24Q9BUV8 137 aa12.31□□□□□ -0.44
SS18-226ENST00000585241 RNF24Q9Y225 148 aa12.31□□□□□ -0.44
SS18-226ENST00000585241 IGHV3OR16-8A0A075B7F1 116 aa12.3□□□□□ -0.44
SS18-226ENST00000585241 TMEM213A2RRL7 107 aa12.3□□□□□ -0.44
SS18-226ENST00000585241 ZNF98A6NK75 572 aa12.3□□□□□ -0.44
SS18-226ENST00000585241 BUB3O43684 328 aa12.3□□□□□ -0.44
SS18-226ENST00000585241 C8orf88P0DMB2 117 aa12.3□□□□□ -0.44
SS18-226ENST00000585241 NPPCP23582 126 aa12.3□□□□□ -0.44
SS18-226ENST00000585241 SYNJ2BPP57105 145 aa12.3□□□□□ -0.44
SS18-226ENST00000585241 SCRT1Q9BWW7 348 aa12.3□□□□□ -0.44
SS18-226ENST00000585241 PFDN2Q9UHV9 154 aa12.3□□□□□ -0.44
SS18-226ENST00000585241 ZNF320A2RRD8 509 aa12.29□□□□□ -0.44
SS18-226ENST00000585241 MAP1LC3B2A6NCE7 125 aa12.29□□□□□ -0.44
SS18-226ENST00000585241 H2AFB1P0C5Y9 115 aa12.29□□□□□ -0.44
SS18-226ENST00000585241 TAS2R45P59539 299 aa12.29□□□□□ -0.44
SS18-226ENST00000585241 KHDC3LQ587J8 217 aa12.29□□□□□ -0.44
SS18-226ENST00000585241 C1orf194Q5T5A4 169 aa12.29□□□□□ -0.44
SS18-226ENST00000585241 DLX4Q92988 240 aaPredicted RBP12.29□□□□□ -0.44
SS18-226ENST00000585241 SLC25A2Q9BXI2 301 aa12.29□□□□□ -0.44
SS18-226ENST00000585241 MAP1LC3BQ9GZQ8 125 aa12.29□□□□□ -0.44
SS18-226ENST00000585241 TENM1Q9UKZ4 2725 aa12.29□□□□□ -0.44
SS18-226ENST00000585241 TRAV5A0A0B4J249 113 aa12.28□□□□□ -0.44
SS18-226ENST00000585241 IGHV7-4-1A0A0J9YVY3 117 aa12.28□□□□□ -0.44
SS18-226ENST00000585241 MRPS12O15235 138 aaKnown RBP12.28□□□□□ -0.44
SS18-226ENST00000585241 ZNF207O43670 478 aaKnown RBP12.28□□□□□ -0.44
SS18-226ENST00000585241 HBE1P02100 147 aa12.28□□□□□ -0.44
SS18-226ENST00000585241 RAB14P61106 215 aa12.28□□□□□ -0.44
SS18-226ENST00000585241 TM4SF20Q53R12 229 aa12.28□□□□□ -0.44
SS18-226ENST00000585241 C12orf54Q6X4T0 127 aa12.28□□□□□ -0.44
SS18-226ENST00000585241 PQLC2Q6ZP29 291 aa12.28□□□□□ -0.44
SS18-226ENST00000585241 OR4F17Q8NGA8 305 aa12.28□□□□□ -0.44
SS18-226ENST00000585241 MARC2Q969Z3 335 aa12.28□□□□□ -0.44
SS18-226ENST00000585241 ZNF503Q96F45 646 aa12.28□□□□□ -0.44
SS18-226ENST00000585241 OR4F4Q96R69 305 aa12.28□□□□□ -0.44
SS18-226ENST00000585241 TMEM14CQ9P0S9 112 aa12.28□□□□□ -0.44
SS18-226ENST00000585241 A0A1W2PS18 150 aa12.27□□□□□ -0.45
SS18-226ENST00000585241 C2orf70A6NJV1 201 aa12.27□□□□□ -0.45
SS18-226ENST00000585241 EIF3GO75821 320 aaKnown RBP eCLIP12.27□□□□□ -0.45
SS18-226ENST00000585241 APOHP02749 345 aaPredicted RBP12.27□□□□□ -0.45
SS18-226ENST00000585241 GP9P14770 177 aa12.27□□□□□ -0.45
SS18-226ENST00000585241 C16orf54Q6UWD8 224 aa12.27□□□□□ -0.45
SS18-226ENST00000585241 SHISA2Q6UWI4 295 aa12.27□□□□□ -0.45
SS18-226ENST00000585241 LCN15Q6UWW0 184 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms