RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 STOML3Q8TAV4 291 aa13.97□□□□□ -0.17
RFFL-211ENST00000584541 MARC2Q969Z3 335 aa13.97□□□□□ -0.17
RFFL-211ENST00000584541 SLC25A32Q9H2D1 315 aa13.97□□□□□ -0.17
RFFL-211ENST00000584541 DOK5Q9P104 306 aa13.97□□□□□ -0.17
RFFL-211ENST00000584541 HIGD1AQ9Y241 93 aa13.97□□□□□ -0.17
RFFL-211ENST00000584541 WNK1Q9H4A3 2382 aa13.97□□□□□ -0.17
RFFL-211ENST00000584541 ACOT6Q3I5F7 207 aaPredicted RBP13.96□□□□□ -0.17
RFFL-211ENST00000584541 EIF5AL1Q6IS14 154 aaKnown RBP13.96□□□□□ -0.17
RFFL-211ENST00000584541 OR2G3Q8NGZ4 309 aa13.96□□□□□ -0.17
RFFL-211ENST00000584541 SH3BGRL3Q9H299 93 aa13.96□□□□□ -0.17
RFFL-211ENST00000584541 MRPL27Q9P0M9 148 aaKnown RBP13.96□□□□□ -0.17
RFFL-211ENST00000584541 A0A1W2PS18 150 aa13.95□□□□□ -0.18
RFFL-211ENST00000584541 TMEM213A2RRL7 107 aa13.95□□□□□ -0.18
RFFL-211ENST00000584541 C2orf70A6NJV1 201 aa13.95□□□□□ -0.18
RFFL-211ENST00000584541 MBP02144 154 aa13.95□□□□□ -0.18
RFFL-211ENST00000584541 CRYBB3P26998 211 aa13.95□□□□□ -0.18
RFFL-211ENST00000584541 C10orf113Q5VZT2 155 aa13.95□□□□□ -0.18
RFFL-211ENST00000584541 GATAD1Q8WUU5 269 aa13.95□□□□□ -0.18
RFFL-211ENST00000584541 GRAMD2BQ96HH9 432 aa13.95□□□□□ -0.18
RFFL-211ENST00000584541 TMEM231Q9H6L2 316 aa13.95□□□□□ -0.18
RFFL-211ENST00000584541 DNAJC4Q9NNZ3 241 aa13.95□□□□□ -0.18
RFFL-211ENST00000584541 RNF24Q9Y225 148 aa13.95□□□□□ -0.18
RFFL-211ENST00000584541 IGHV7-4-1A0A0J9YVY3 117 aa13.94□□□□□ -0.18
RFFL-211ENST00000584541 SEC11BP0C7V7 166 aa13.94□□□□□ -0.18
RFFL-211ENST00000584541 SPP1P10451 314 aa13.94□□□□□ -0.18
RFFL-211ENST00000584541 CBLN1P23435 193 aa13.94□□□□□ -0.18
RFFL-211ENST00000584541 ST8SIA2Q92186 375 aa13.94□□□□□ -0.18
RFFL-211ENST00000584541 MCRIP2Q9BUT9 160 aaKnown RBP13.94□□□□□ -0.18
RFFL-211ENST00000584541 BOLA1Q9Y3E2 137 aa13.94□□□□□ -0.18
RFFL-211ENST00000584541 RFNGQ9Y644 331 aa13.94□□□□□ -0.18
RFFL-211ENST00000584541 STAB1Q9NY15 2570 aa13.93□□□□□ -0.18
RFFL-211ENST00000584541 FOLR2P14207 255 aa13.93□□□□□ -0.18
RFFL-211ENST00000584541 AKR1C8PQ5T2L2 129 aa13.93□□□□□ -0.18
RFFL-211ENST00000584541 DYNLRB2Q8TF09 96 aa13.93□□□□□ -0.18
RFFL-211ENST00000584541 RNF2Q99496 336 aa13.93□□□□□ -0.18
RFFL-211ENST00000584541 SMPXQ9UHP9 88 aa13.93□□□□□ -0.18
RFFL-211ENST00000584541 IGHV3-49A0A0A0MS15 119 aa13.92□□□□□ -0.18
RFFL-211ENST00000584541 SEC14L6B5MCN3 397 aa13.92□□□□□ -0.18
RFFL-211ENST00000584541 SAP30O75446 220 aa13.92□□□□□ -0.18
RFFL-211ENST00000584541 CSN3P07498 182 aa13.92□□□□□ -0.18
RFFL-211ENST00000584541 M6PRP20645 277 aa13.92□□□□□ -0.18
RFFL-211ENST00000584541 PATE2Q6UY27 113 aa13.92□□□□□ -0.18
RFFL-211ENST00000584541 LINC00305Q7Z4B0 112 aa13.92□□□□□ -0.18
RFFL-211ENST00000584541 WFDC9Q8NEX5 89 aa13.92□□□□□ -0.18
RFFL-211ENST00000584541 TMEM37Q8WXS4 190 aa13.92□□□□□ -0.18
RFFL-211ENST00000584541 RHPN1-AS1Q9BWJ2 59 aa13.92□□□□□ -0.18
RFFL-211ENST00000584541 SLC25A39Q9BZJ4 359 aaPredicted RBP13.92□□□□□ -0.18
RFFL-211ENST00000584541 SIGLEC8Q9NYZ4 499 aa13.92□□□□□ -0.18
RFFL-211ENST00000584541 C8orf88P0DMB2 117 aa13.91□□□□□ -0.18
RFFL-211ENST00000584541 RHOBP62745 196 aa13.91□□□□□ -0.18
RFFL-211ENST00000584541 TMEM41BQ5BJD5 291 aa13.91□□□□□ -0.18
RFFL-211ENST00000584541 C9orf66Q5T8R8 295 aa13.91□□□□□ -0.18
RFFL-211ENST00000584541 FAM78BQ5VT40 261 aa13.91□□□□□ -0.18
RFFL-211ENST00000584541 IL34Q6ZMJ4 242 aa13.91□□□□□ -0.18
RFFL-211ENST00000584541 OR10G4Q8NGN3 311 aa13.91□□□□□ -0.18
RFFL-211ENST00000584541 OR10G9Q8NGN4 311 aa13.91□□□□□ -0.18
RFFL-211ENST00000584541 OR10G7Q8NGN6 311 aa13.91□□□□□ -0.18
RFFL-211ENST00000584541 UHRF2Q96PU4 802 aa13.91□□□□□ -0.18
RFFL-211ENST00000584541 SHANK2-AS3Q9BTD1 123 aa13.91□□□□□ -0.18
RFFL-211ENST00000584541 MRPL32Q9BYC8 188 aaKnown RBP13.91□□□□□ -0.18
RFFL-211ENST00000584541 U3KQE9 123 aa13.91□□□□□ -0.18
RFFL-211ENST00000584541 IGHV3OR16-13A0A075B7E8 117 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 IGHV3-74A0A0B4J1X5 117 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 IGHV3-66A0A0C4DH42 116 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 A0A1W2PPV4 95 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 ZNF98A6NK75 572 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 H3BRN7 92 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 CHEK1O14757 476 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 BUB3O43684 328 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 APOHP02749 345 aaPredicted RBP13.9□□□□□ -0.18
RFFL-211ENST00000584541 EDN2P20800 178 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 RAB2AP61019 212 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 GCSAMLQ5JQS6 135 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 PRR31Q5SQ13 230 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 C1orf194Q5T5A4 169 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 TMED6Q8WW62 240 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 VSIRQ9H7M9 311 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 SLC25A22Q9H936 323 aa13.9□□□□□ -0.18
RFFL-211ENST00000584541 TECRQ9NZ01 308 aaKnown RBP13.9□□□□□ -0.18
RFFL-211ENST00000584541 UMAD1C9J7I0 102 aa13.89□□□□□ -0.19
RFFL-211ENST00000584541 CD5P06127 495 aa13.89□□□□□ -0.19
RFFL-211ENST00000584541 INSL3P51460 131 aa13.89□□□□□ -0.19
RFFL-211ENST00000584541 OR8I2Q8N0Y5 310 aa13.89□□□□□ -0.19
RFFL-211ENST00000584541 PHYHIPLQ96FC7 376 aa13.89□□□□□ -0.19
RFFL-211ENST00000584541 SCRT1Q9BWW7 348 aa13.89□□□□□ -0.19
RFFL-211ENST00000584541 GPR61Q9BZJ8 451 aa13.89□□□□□ -0.19
RFFL-211ENST00000584541 FUT9Q9Y231 359 aa13.89□□□□□ -0.19
RFFL-211ENST00000584541 FAM122CQ6P4D5 195 aa13.88□□□□□ -0.19
RFFL-211ENST00000584541 C16orf54Q6UWD8 224 aa13.88□□□□□ -0.19
RFFL-211ENST00000584541 GPR82Q96P67 336 aa13.88□□□□□ -0.19
RFFL-211ENST00000584541 ACTR3CQ9C0K3 210 aaPredicted RBP13.88□□□□□ -0.19
RFFL-211ENST00000584541 HELTA6NFD8 242 aa13.87□□□□□ -0.19
RFFL-211ENST00000584541 CDC34P49427 236 aaPredicted RBP13.87□□□□□ -0.19
RFFL-211ENST00000584541 TAS2R45P59539 299 aa13.87□□□□□ -0.19
RFFL-211ENST00000584541 ADAMTSL5Q6ZMM2 481 aa13.87□□□□□ -0.19
RFFL-211ENST00000584541 SEPSECSQ9HD40 501 aaKnown RBP13.87□□□□□ -0.19
RFFL-211ENST00000584541 RPRMQ9NS64 109 aa13.87□□□□□ -0.19
RFFL-211ENST00000584541 MLXQ9UH92 298 aa13.87□□□□□ -0.19
RFFL-211ENST00000584541 RPL7P18124 248 aaKnown RBP13.86□□□□□ -0.19
RFFL-211ENST00000584541 RAB5CP51148 216 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms