RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 TMEM190Q8WZ59 177 aa12.49□□□□□ -0.41
CDK5RAP3-228ENST00000583363 VWFP04275 2813 aa12.49□□□□□ -0.41
CDK5RAP3-228ENST00000583363 IGHV3OR16-8A0A075B7F1 116 aa12.48□□□□□ -0.41
CDK5RAP3-228ENST00000583363 ELOA3CA0A087WX78 387 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-228ENST00000583363 K7EMT4 169 aa12.48□□□□□ -0.41
CDK5RAP3-228ENST00000583363 M6PRP20645 277 aa12.48□□□□□ -0.41
CDK5RAP3-228ENST00000583363 SYNJ2BPP57105 145 aa12.48□□□□□ -0.41
CDK5RAP3-228ENST00000583363 C1QL4Q86Z23 238 aa12.48□□□□□ -0.41
CDK5RAP3-228ENST00000583363 GATAD1Q8WUU5 269 aa12.48□□□□□ -0.41
CDK5RAP3-228ENST00000583363 DLX4Q92988 240 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-228ENST00000583363 C20orf24Q9BUV8 137 aa12.48□□□□□ -0.41
CDK5RAP3-228ENST00000583363 PBDC1Q9BVG4 233 aa12.48□□□□□ -0.41
CDK5RAP3-228ENST00000583363 RPRMQ9NS64 109 aa12.48□□□□□ -0.41
CDK5RAP3-228ENST00000583363 DOK5Q9P104 306 aa12.48□□□□□ -0.41
CDK5RAP3-228ENST00000583363 UMAD1C9J7I0 102 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 COX7A2P2O60397 106 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 OR5G3P0C626 314 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 RAB2AP61019 212 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 TMEM41BQ5BJD5 291 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 AKR1C8PQ5T2L2 129 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 C10orf113Q5VZT2 155 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 ALKAL2Q6UX46 152 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 ZNF680Q8NEM1 530 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 OR10G4Q8NGN3 311 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 OR10G9Q8NGN4 311 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 OR10G7Q8NGN6 311 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 PFDN5Q99471 154 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 RABAC1Q9UI14 185 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 HIGD1AQ9Y241 93 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 U3KQE9 123 aa12.47□□□□□ -0.41
CDK5RAP3-228ENST00000583363 ZNF207O43670 478 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-228ENST00000583363 NPPCP23582 126 aa12.46□□□□□ -0.41
CDK5RAP3-228ENST00000583363 CRYBB3P26998 211 aa12.46□□□□□ -0.41
CDK5RAP3-228ENST00000583363 SULT1A2P50226 295 aa12.46□□□□□ -0.41
CDK5RAP3-228ENST00000583363 IFITM2Q01629 132 aa12.46□□□□□ -0.41
CDK5RAP3-228ENST00000583363 TM4SF20Q53R12 229 aa12.46□□□□□ -0.41
CDK5RAP3-228ENST00000583363 RPP25LQ8N5L8 163 aaKnown RBP12.46□□□□□ -0.41
CDK5RAP3-228ENST00000583363 OR4F17Q8NGA8 305 aa12.46□□□□□ -0.41
CDK5RAP3-228ENST00000583363 OR4F4Q96R69 305 aa12.46□□□□□ -0.41
CDK5RAP3-228ENST00000583363 METTL26Q96S19 204 aa12.46□□□□□ -0.41
CDK5RAP3-228ENST00000583363 UFC1Q9Y3C8 167 aa12.46□□□□□ -0.41
CDK5RAP3-228ENST00000583363 RAB5CP51148 216 aa12.45□□□□□ -0.42
CDK5RAP3-228ENST00000583363 FAM78BQ5VT40 261 aa12.45□□□□□ -0.42
CDK5RAP3-228ENST00000583363 LINC00305Q7Z4B0 112 aa12.45□□□□□ -0.42
CDK5RAP3-228ENST00000583363 RNF2Q99496 336 aa12.45□□□□□ -0.42
CDK5RAP3-228ENST00000583363 SLC25A39Q9BZJ4 359 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-228ENST00000583363 SEPSECSQ9HD40 501 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-228ENST00000583363 TMEM213A2RRL7 107 aa12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 A8MWP6 167 aa12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 SEC14L6B5MCN3 397 aa12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 IFNA7P01567 189 aa12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 C8orf88P0DMB2 117 aa12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 S100A7P31151 101 aa12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 RHOBP62745 196 aa12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 SPATA31B1PQ5VZV4 182 aa12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 FAM122CQ6P4D5 195 aa12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 DPPA3Q6W0C5 159 aa12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 OR9G4Q8NGQ1 327 aa12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 UHRF2Q96PU4 802 aa12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 SHANK2-AS3Q9BTD1 123 aa12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 ACTR3CQ9C0K3 210 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 DAZ1Q9NQZ3 744 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 FUT9Q9Y231 359 aa12.44□□□□□ -0.42
CDK5RAP3-228ENST00000583363 NOTCH1P46531 2555 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 IGHV7-4-1A0A0J9YVY3 117 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 A0A1W2PPV4 95 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 ZNF98A6NK75 572 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 H3BRN7 92 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 OVOL1O14753 267 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 BUB3O43684 328 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 APOHP02749 345 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 FHITP49789 147 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 FAM74A1Q5RGS3 127 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 MORN5Q5VZ52 161 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 IL34Q6ZMJ4 242 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 MIR17HGQ75NE6 70 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 S100A7AQ86SG5 101 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 RNF141Q8WVD5 230 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 MRPL32Q9BYC8 188 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 PEMTQ9UBM1 199 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 SMPXQ9UHP9 88 aa12.43□□□□□ -0.42
CDK5RAP3-228ENST00000583363 WNK1Q9H4A3 2382 aa12.42□□□□□ -0.42
CDK5RAP3-228ENST00000583363 TRAV5A0A0B4J249 113 aa12.42□□□□□ -0.42
CDK5RAP3-228ENST00000583363 C2orf70A6NJV1 201 aa12.42□□□□□ -0.42
CDK5RAP3-228ENST00000583363 PF4P02776 101 aa12.42□□□□□ -0.42
CDK5RAP3-228ENST00000583363 CSN3P07498 182 aa12.42□□□□□ -0.42
CDK5RAP3-228ENST00000583363 EDN2P20800 178 aa12.42□□□□□ -0.42
CDK5RAP3-228ENST00000583363 ZNF726P1Q15940 193 aa12.42□□□□□ -0.42
CDK5RAP3-228ENST00000583363 LINC00482Q8N8I6 264 aa12.42□□□□□ -0.42
CDK5RAP3-228ENST00000583363 RAB24Q969Q5 203 aa12.42□□□□□ -0.42
CDK5RAP3-228ENST00000583363 PFDN2Q9UHV9 154 aa12.42□□□□□ -0.42
CDK5RAP3-228ENST00000583363 IGHV3-49A0A0A0MS15 119 aa12.41□□□□□ -0.42
CDK5RAP3-228ENST00000583363 A0A1W2PS18 150 aa12.41□□□□□ -0.42
CDK5RAP3-228ENST00000583363 CHEK1O14757 476 aa12.41□□□□□ -0.42
CDK5RAP3-228ENST00000583363 CBLN1P23435 193 aa12.41□□□□□ -0.42
CDK5RAP3-228ENST00000583363 CDC34P49427 236 aaPredicted RBP12.41□□□□□ -0.42
CDK5RAP3-228ENST00000583363 ADAMTSL5Q6ZMM2 481 aa12.41□□□□□ -0.42
CDK5RAP3-228ENST00000583363 FAM213BQ8TBF2 198 aa12.41□□□□□ -0.42
CDK5RAP3-228ENST00000583363 MBD3L1Q8WWY6 194 aa12.41□□□□□ -0.42
CDK5RAP3-228ENST00000583363 MARC2Q969Z3 335 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms