RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 C1orf194Q5T5A4 169 aa15.08■□□□□ 0
TOP3A-213ENST00000582230 C16orf54Q6UWD8 224 aa15.08■□□□□ 0
TOP3A-213ENST00000582230 Q6ZRG5 221 aa15.08■□□□□ 0
TOP3A-213ENST00000582230 PPP1R14BQ96C90 147 aa15.08■□□□□ 0
TOP3A-213ENST00000582230 PRR25Q96S07 402 aa15.08■□□□□ 0
TOP3A-213ENST00000582230 SMIM3Q9BZL3 60 aa15.08■□□□□ 0
TOP3A-213ENST00000582230 WDR61Q9GZS3 305 aaKnown RBP15.08■□□□□ 0
TOP3A-213ENST00000582230 HELTA6NFD8 242 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 PRB2P02812 416 aaPredicted RBP15.07■□□□□ 0
TOP3A-213ENST00000582230 AP2S1P53680 142 aaPredicted RBP15.07■□□□□ 0
TOP3A-213ENST00000582230 PAFAH1B2P68402 229 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 PRR20EP86478 221 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 PRR20CP86479 221 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 PRR20DP86480 221 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 PRR20BP86481 221 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 PRR20AP86496 221 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 OPCMLQ14982 345 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 GTSCR1Q86UQ5 136 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 STPG3Q8N7X2 389 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 ZNF709Q8N972 641 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 SCGB1C1Q8TD33 95 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 NEURL2Q9BR09 285 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 NPCDR1Q9BY65 106 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 PARD6GQ9BYG4 376 aaPredicted RBP15.07■□□□□ 0
TOP3A-213ENST00000582230 ARL6Q9H0F7 186 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 HIGD1AQ9Y241 93 aa15.07■□□□□ 0
TOP3A-213ENST00000582230 hCG_2014768A0A024R1R8 64 aa15.06■□□□□ 0
TOP3A-213ENST00000582230 SMLR1H3BR10 107 aa15.06■□□□□ 0
TOP3A-213ENST00000582230 RPL11P62913 178 aaKnown RBP15.06■□□□□ 0
TOP3A-213ENST00000582230 GLMPQ8WWB7 406 aa15.06■□□□□ 0
TOP3A-213ENST00000582230 KCNIP2Q9NS61 270 aa15.06■□□□□ 0
TOP3A-213ENST00000582230 DOK5Q9P104 306 aa15.06■□□□□ 0
TOP3A-213ENST00000582230 FBXL17Q9UF56 701 aa15.06■□□□□ 0
TOP3A-213ENST00000582230 RNF24Q9Y225 148 aa15.06■□□□□ 0
TOP3A-213ENST00000582230 ELOA3CA0A087WX78 387 aaPredicted RBP15.05■□□□□ -0
TOP3A-213ENST00000582230 RNF222A6NCQ9 220 aa15.05■□□□□ -0
TOP3A-213ENST00000582230 OR4C46A6NHA9 309 aa15.05■□□□□ -0
TOP3A-213ENST00000582230 C17orf112F2Z3M2 114 aa15.05■□□□□ -0
TOP3A-213ENST00000582230 OR5G3P0C626 314 aa15.05■□□□□ -0
TOP3A-213ENST00000582230 ZNF266Q14584 549 aa15.05■□□□□ -0
TOP3A-213ENST00000582230 MIC13Q5XKP0 118 aa15.05■□□□□ -0
TOP3A-213ENST00000582230 ST6GAL2Q96JF0 529 aa15.05■□□□□ -0
TOP3A-213ENST00000582230 WFDC1Q9HC57 220 aa15.05■□□□□ -0
TOP3A-213ENST00000582230 SLC39A9Q9NUM3 307 aa15.05■□□□□ -0
TOP3A-213ENST00000582230 PXMP4Q9Y6I8 212 aa15.05■□□□□ -0
TOP3A-213ENST00000582230 NBEAL1Q6ZS30 2694 aa15.04■□□□□ -0
TOP3A-213ENST00000582230 ARPC5O15511 151 aa15.04■□□□□ -0
TOP3A-213ENST00000582230 B2MP61769 119 aa15.04■□□□□ -0
TOP3A-213ENST00000582230 TCTE3Q8IZS6 198 aa15.04■□□□□ -0
TOP3A-213ENST00000582230 SLC25A39Q9BZJ4 359 aaPredicted RBP15.04■□□□□ -0
TOP3A-213ENST00000582230 ARV1Q9H2C2 271 aa15.04■□□□□ -0
TOP3A-213ENST00000582230 CMYA5Q8N3K9 4069 aa15.03■□□□□ -0
TOP3A-213ENST00000582230 TRAV2A0A0B4J234 112 aa15.03■□□□□ -0
TOP3A-213ENST00000582230 ZNF98A6NK75 572 aa15.03■□□□□ -0
TOP3A-213ENST00000582230 HMSDA8MTL9 139 aa15.03■□□□□ -0
TOP3A-213ENST00000582230 COX7A2P2O60397 106 aa15.03■□□□□ -0
TOP3A-213ENST00000582230 PATE2Q6UY27 113 aa15.03■□□□□ -0
TOP3A-213ENST00000582230 SIGLEC15Q6ZMC9 328 aa15.03■□□□□ -0
TOP3A-213ENST00000582230 OR8I2Q8N0Y5 310 aa15.03■□□□□ -0
TOP3A-213ENST00000582230 OR1L4Q8NGR5 311 aa15.03■□□□□ -0
TOP3A-213ENST00000582230 GPR82Q96P67 336 aa15.03■□□□□ -0
TOP3A-213ENST00000582230 PFDN5Q99471 154 aa15.03■□□□□ -0
TOP3A-213ENST00000582230 SHANK2-AS3Q9BTD1 123 aa15.03■□□□□ -0
TOP3A-213ENST00000582230 MFFQ9GZY8 342 aa15.03■□□□□ -0
TOP3A-213ENST00000582230 DNAJC4Q9NNZ3 241 aa15.03■□□□□ -0
TOP3A-213ENST00000582230 IGKV3-7A0A075B6H7 116 aa15.02■□□□□ -0
TOP3A-213ENST00000582230 H3BRN7 92 aa15.02■□□□□ -0
TOP3A-213ENST00000582230 K7EIL1 84 aa15.02■□□□□ -0
TOP3A-213ENST00000582230 DNASE2O00115 360 aaPredicted RBP15.02■□□□□ -0
TOP3A-213ENST00000582230 CD81P60033 236 aa15.02■□□□□ -0
TOP3A-213ENST00000582230 AKAP14Q86UN6 197 aa15.02■□□□□ -0
TOP3A-213ENST00000582230 Q8N1Y9 231 aa15.02■□□□□ -0
TOP3A-213ENST00000582230 MS4A6AQ9H2W1 248 aa15.02■□□□□ -0
TOP3A-213ENST00000582230 NOTCH1P46531 2555 aa15.02□□□□□ -0.01
TOP3A-213ENST00000582230 TAAR5O14804 337 aa15.01□□□□□ -0.01
TOP3A-213ENST00000582230 CMC4P56277 68 aaPredicted RBP15.01□□□□□ -0.01
TOP3A-213ENST00000582230 C10orf113Q5VZT2 155 aa15.01□□□□□ -0.01
TOP3A-213ENST00000582230 GBGT1Q8N5D6 347 aa15.01□□□□□ -0.01
TOP3A-213ENST00000582230 OR11H4Q8NGC9 324 aa15.01□□□□□ -0.01
TOP3A-213ENST00000582230 MRAPQ8TCY5 172 aa15.01□□□□□ -0.01
TOP3A-213ENST00000582230 TMEM37Q8WXS4 190 aa15.01□□□□□ -0.01
TOP3A-213ENST00000582230 UHRF2Q96PU4 802 aa15.01□□□□□ -0.01
TOP3A-213ENST00000582230 SLC25A22Q9H936 323 aa15.01□□□□□ -0.01
TOP3A-213ENST00000582230 A0A1B0GVG6 124 aa15□□□□□ -0.01
TOP3A-213ENST00000582230 ZNF345Q14585 488 aa15□□□□□ -0.01
TOP3A-213ENST00000582230 LINC00305Q7Z4B0 112 aa15□□□□□ -0.01
TOP3A-213ENST00000582230 STXBP6Q8NFX7 210 aa15□□□□□ -0.01
TOP3A-213ENST00000582230 GATAD1Q8WUU5 269 aa15□□□□□ -0.01
TOP3A-213ENST00000582230 FAM110AQ9BQ89 295 aa15□□□□□ -0.01
TOP3A-213ENST00000582230 RSG1Q9BU20 258 aa15□□□□□ -0.01
TOP3A-213ENST00000582230 SCRT1Q9BWW7 348 aa15□□□□□ -0.01
TOP3A-213ENST00000582230 SMAD5-AS1Q9Y6J3 95 aa15□□□□□ -0.01
TOP3A-213ENST00000582230 BORCS7-ASMTA0A0B4J1R7 106 aa14.99□□□□□ -0.01
TOP3A-213ENST00000582230 CD7P09564 240 aa14.99□□□□□ -0.01
TOP3A-213ENST00000582230 GALR1P47211 349 aa14.99□□□□□ -0.01
TOP3A-213ENST00000582230 TFPI2P48307 235 aa14.99□□□□□ -0.01
TOP3A-213ENST00000582230 DEFB121Q5J5C9 76 aa14.99□□□□□ -0.01
TOP3A-213ENST00000582230 NRN1Q9NPD7 142 aa14.99□□□□□ -0.01
TOP3A-213ENST00000582230 TIMM9Q9Y5J7 89 aa14.99□□□□□ -0.01
TOP3A-213ENST00000582230 RPL7P18124 248 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms