RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 THAP8Q8NA92 274 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 KIR2DL5BQ8NHK3 375 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 LINC00052Q96N35 136 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 SLC25A22Q9H936 323 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 NPVFQ9HCQ7 196 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 NRN1Q9NPD7 142 aa4.86□□□□□ -1.63
TRAF4-213ENST00000578917 RCL1Q9Y2P8 373 aaKnown RBP4.86□□□□□ -1.63
TRAF4-213ENST00000578917 IGKV1D-37A0A075B6S9 117 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 IGKV1OR2-108A0A075B7D4 117 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 KNCNA6PVL3 124 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 K7EQG2 157 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 PRAF2O60831 178 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 HYPMO75409 117 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 DEDDO75618 318 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 CST7O76096 145 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 GATA2P23769 480 aaPredicted RBP4.85□□□□□ -1.63
TRAF4-213ENST00000578917 GALR1P47211 349 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 PAX9P55771 341 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 NUTF2P61970 127 aaKnown RBP4.85□□□□□ -1.63
TRAF4-213ENST00000578917 SELENOTP62341 195 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 DLK1P80370 383 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 FGL1Q08830 312 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 TEPPQ6URK8 271 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 CYP2G1PQ6ZSU1 146 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 TMEM144Q7Z5S9 345 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 STX12Q86Y82 276 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 LRRC20Q8TCA0 184 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 GLMPQ8WWB7 406 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 OVOL2Q9BRP0 275 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 RSG1Q9BU20 258 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 DOK5Q9P104 306 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 U3KQE9 123 aa4.85□□□□□ -1.63
TRAF4-213ENST00000578917 FAM24AA6NFZ4 105 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 K7EPK0 472 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 CCNKO75909 580 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 SIX6O95475 246 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 CA1P00915 261 aaPredicted RBP4.84□□□□□ -1.63
TRAF4-213ENST00000578917 LINC00869P0C866 280 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 S100A11P31949 105 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 HBG1P69891 147 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 HBG2P69892 147 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 CYCSP99999 105 aaKnown RBP4.84□□□□□ -1.63
TRAF4-213ENST00000578917 IFITM3Q01628 133 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 SLC38A11Q08AI6 406 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 TMEM14EPQ6UXP3 125 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 FAM24BQ8N5W8 94 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 DCANP1Q8TF63 244 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 RNF183Q96D59 192 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 C16orf92Q96LL3 132 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 GPR82Q96P67 336 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 RARRES2Q99969 163 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 GGACTQ9BVM4 153 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 ARL6Q9H0F7 186 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 RNF24Q9Y225 148 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 HIGD1AQ9Y241 93 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 TP53TG1Q9Y2A0 90 aa4.84□□□□□ -1.63
TRAF4-213ENST00000578917 A0A0J9YWU9 116 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 CXorf65A6NEN9 183 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 ZNF98A6NK75 572 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 PRSS46E5RG02 174 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 FNDC10F2Z333 226 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 AGPAT2O15120 278 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 COX7A2P2O60397 106 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 IGKV3-20P01619 116 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 ATF4P18848 351 aaPredicted RBP4.83□□□□□ -1.64
TRAF4-213ENST00000578917 CAMLGP49069 296 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 MEOX2P50222 304 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 SULT1A1P50225 295 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 RAB32Q13637 225 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 LRRC37A5PQ49AS3 106 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 CASC10Q5T4H9 136 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 SAMD13Q5VXD3 122 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 EBLN2Q6P2I7 272 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 MORN3Q6PF18 240 aaPredicted RBP4.83□□□□□ -1.64
TRAF4-213ENST00000578917 TMEM182Q6ZP80 229 aaPredicted RBP4.83□□□□□ -1.64
TRAF4-213ENST00000578917 Q6ZRG5 221 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 ZNF546Q86UE3 836 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 OR4B1Q8NGF8 309 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 OR11H2Q8NH07 326 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 GATAD1Q8WUU5 269 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 MARVELD1Q9BSK0 173 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 SLC25A31Q9H0C2 315 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 EDA2RQ9HAV5 297 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 UQCC1Q9NVA1 299 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 SLC45A2Q9UMX9 530 aa4.83□□□□□ -1.64
TRAF4-213ENST00000578917 PMS2P5A8MQ11 134 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 E5RGE8 158 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 ISLRO14498 428 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 SPP1P10451 314 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 RPL7P18124 248 aaKnown RBP4.82□□□□□ -1.64
TRAF4-213ENST00000578917 PSMB3P49720 205 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 BAXQ07812 192 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 ARL16Q0P5N6 197 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 ATP6V1FQ16864 119 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 TMEM41BQ5BJD5 291 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 PXDC1Q5TGL8 231 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 C10orf113Q5VZT2 155 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 TMEM252Q8N6L7 170 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 ZNF709Q8N972 641 aa4.82□□□□□ -1.64
TRAF4-213ENST00000578917 UHRF2Q96PU4 802 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms