RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 Q6ZRG5 221 aa9.23□□□□□ -0.93
IFT20-207ENST00000578547 WFDC9Q8NEX5 89 aa9.23□□□□□ -0.93
IFT20-207ENST00000578547 DYNLRB2Q8TF09 96 aa9.23□□□□□ -0.93
IFT20-207ENST00000578547 NARS2Q96I59 477 aaKnown RBP9.23□□□□□ -0.93
IFT20-207ENST00000578547 IGHV7-4-1A0A0J9YVY3 117 aa9.22□□□□□ -0.93
IFT20-207ENST00000578547 K7EMT4 169 aa9.22□□□□□ -0.93
IFT20-207ENST00000578547 APOHP02749 345 aaPredicted RBP9.22□□□□□ -0.93
IFT20-207ENST00000578547 IGLL1P15814 213 aa9.22□□□□□ -0.93
IFT20-207ENST00000578547 CBLN1P23435 193 aa9.22□□□□□ -0.93
IFT20-207ENST00000578547 GCSAMLQ5JQS6 135 aa9.22□□□□□ -0.93
IFT20-207ENST00000578547 IL34Q6ZMJ4 242 aa9.22□□□□□ -0.93
IFT20-207ENST00000578547 UHRF2Q96PU4 802 aa9.22□□□□□ -0.93
IFT20-207ENST00000578547 SLC25A32Q9H2D1 315 aa9.22□□□□□ -0.93
IFT20-207ENST00000578547 HIGD1AQ9Y241 93 aa9.22□□□□□ -0.93
IFT20-207ENST00000578547 TIMM9Q9Y5J7 89 aa9.22□□□□□ -0.93
IFT20-207ENST00000578547 NOTCH3Q9UM47 2321 aa9.22□□□□□ -0.93
IFT20-207ENST00000578547 MGAM2Q2M2H8 2515 aa9.22□□□□□ -0.93
IFT20-207ENST00000578547 CMYA5Q8N3K9 4069 aa9.21□□□□□ -0.93
IFT20-207ENST00000578547 C4BPBP20851 252 aa9.21□□□□□ -0.94
IFT20-207ENST00000578547 CRYBB3P26998 211 aa9.21□□□□□ -0.94
IFT20-207ENST00000578547 PXDC1Q5TGL8 231 aa9.21□□□□□ -0.94
IFT20-207ENST00000578547 C10orf113Q5VZT2 155 aa9.21□□□□□ -0.94
IFT20-207ENST00000578547 LEMD1Q68G75 181 aa9.21□□□□□ -0.94
IFT20-207ENST00000578547 ADAMTSL5Q6ZMM2 481 aa9.21□□□□□ -0.94
IFT20-207ENST00000578547 OR1L4Q8NGR5 311 aa9.21□□□□□ -0.94
IFT20-207ENST00000578547 ST8SIA2Q92186 375 aa9.21□□□□□ -0.94
IFT20-207ENST00000578547 MARC2Q969Z3 335 aa9.21□□□□□ -0.94
IFT20-207ENST00000578547 GNPNAT1Q96EK6 184 aaPredicted RBP9.21□□□□□ -0.94
IFT20-207ENST00000578547 MCRIP2Q9BUT9 160 aaKnown RBP9.21□□□□□ -0.94
IFT20-207ENST00000578547 RHPN1-AS1Q9BWJ2 59 aa9.21□□□□□ -0.94
IFT20-207ENST00000578547 ARV1Q9H2C2 271 aa9.21□□□□□ -0.94
IFT20-207ENST00000578547 MRPL27Q9P0M9 148 aaKnown RBP9.21□□□□□ -0.94
IFT20-207ENST00000578547 SMPXQ9UHP9 88 aa9.21□□□□□ -0.94
IFT20-207ENST00000578547 CHEK1O14757 476 aa9.2□□□□□ -0.94
IFT20-207ENST00000578547 TPT1P13693 172 aaKnown RBP9.2□□□□□ -0.94
IFT20-207ENST00000578547 BMI1P35226 326 aa9.2□□□□□ -0.94
IFT20-207ENST00000578547 PLP1P60201 277 aa9.2□□□□□ -0.94
IFT20-207ENST00000578547 EIF5AP63241 154 aaKnown RBP9.2□□□□□ -0.94
IFT20-207ENST00000578547 C9orf66Q5T8R8 295 aa9.2□□□□□ -0.94
IFT20-207ENST00000578547 PATE2Q6UY27 113 aa9.2□□□□□ -0.94
IFT20-207ENST00000578547 SLC51BQ86UW2 128 aa9.2□□□□□ -0.94
IFT20-207ENST00000578547 OR2G3Q8NGZ4 309 aa9.2□□□□□ -0.94
IFT20-207ENST00000578547 GRAMD2BQ96HH9 432 aa9.2□□□□□ -0.94
IFT20-207ENST00000578547 PFDN5Q99471 154 aa9.2□□□□□ -0.94
IFT20-207ENST00000578547 PSMG3Q9BT73 122 aaPredicted RBP9.2□□□□□ -0.94
IFT20-207ENST00000578547 SCRT1Q9BWW7 348 aa9.2□□□□□ -0.94
IFT20-207ENST00000578547 SLC25A22Q9H936 323 aa9.2□□□□□ -0.94
IFT20-207ENST00000578547 DNAJC4Q9NNZ3 241 aa9.2□□□□□ -0.94
IFT20-207ENST00000578547 MLXQ9UH92 298 aa9.2□□□□□ -0.94
IFT20-207ENST00000578547 PFDN2Q9UHV9 154 aa9.2□□□□□ -0.94
IFT20-207ENST00000578547 ELOA3CA0A087WX78 387 aaPredicted RBP9.19□□□□□ -0.94
IFT20-207ENST00000578547 H3BRN7 92 aa9.19□□□□□ -0.94
IFT20-207ENST00000578547 C8orf88P0DMB2 117 aa9.19□□□□□ -0.94
IFT20-207ENST00000578547 RAB2AP61019 212 aa9.19□□□□□ -0.94
IFT20-207ENST00000578547 ACOT6Q3I5F7 207 aaPredicted RBP9.19□□□□□ -0.94
IFT20-207ENST00000578547 MORN5Q5VZ52 161 aa9.19□□□□□ -0.94
IFT20-207ENST00000578547 LINC00305Q7Z4B0 112 aa9.19□□□□□ -0.94
IFT20-207ENST00000578547 BAP18Q8IXM2 172 aa9.19□□□□□ -0.94
IFT20-207ENST00000578547 STOML3Q8TAV4 291 aa9.19□□□□□ -0.94
IFT20-207ENST00000578547 TMEM37Q8WXS4 190 aa9.19□□□□□ -0.94
IFT20-207ENST00000578547 RNF2Q99496 336 aa9.19□□□□□ -0.94
IFT20-207ENST00000578547 SHANK2-AS3Q9BTD1 123 aa9.19□□□□□ -0.94
IFT20-207ENST00000578547 SLC25A39Q9BZJ4 359 aaPredicted RBP9.19□□□□□ -0.94
IFT20-207ENST00000578547 TMEM231Q9H6L2 316 aa9.19□□□□□ -0.94
IFT20-207ENST00000578547 VSIRQ9H7M9 311 aa9.19□□□□□ -0.94
IFT20-207ENST00000578547 IGKV3-7A0A075B6H7 116 aa9.18□□□□□ -0.94
IFT20-207ENST00000578547 A0A1W2PS18 150 aa9.18□□□□□ -0.94
IFT20-207ENST00000578547 ZNF98A6NK75 572 aa9.18□□□□□ -0.94
IFT20-207ENST00000578547 SPP1P10451 314 aa9.18□□□□□ -0.94
IFT20-207ENST00000578547 S100A7P31151 101 aa9.18□□□□□ -0.94
IFT20-207ENST00000578547 RPL11P62913 178 aaKnown RBP9.18□□□□□ -0.94
IFT20-207ENST00000578547 CD300EQ496F6 205 aaPredicted RBP9.18□□□□□ -0.94
IFT20-207ENST00000578547 OXLD1Q5BKU9 147 aa9.18□□□□□ -0.94
IFT20-207ENST00000578547 AKR1C8PQ5T2L2 129 aa9.18□□□□□ -0.94
IFT20-207ENST00000578547 FAM78BQ5VT40 261 aa9.18□□□□□ -0.94
IFT20-207ENST00000578547 FAM122CQ6P4D5 195 aa9.18□□□□□ -0.94
IFT20-207ENST00000578547 S100A7AQ86SG5 101 aa9.18□□□□□ -0.94
IFT20-207ENST00000578547 GATAD1Q8WUU5 269 aa9.18□□□□□ -0.94
IFT20-207ENST00000578547 TMED6Q8WW62 240 aa9.18□□□□□ -0.94
IFT20-207ENST00000578547 U3KQE9 123 aa9.18□□□□□ -0.94
IFT20-207ENST00000578547 TRAV5A0A0B4J249 113 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 BUB3O43684 328 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 EIF3GO75821 320 aaKnown RBP eCLIP9.17□□□□□ -0.94
IFT20-207ENST00000578547 M6PRP20645 277 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 SERF2P84101 59 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 DEFB114Q30KQ6 69 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 TMEM41BQ5BJD5 291 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 SPATA31B1PQ5VZV4 182 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 C16orf54Q6UWD8 224 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 RBPMS2Q6ZRY4 209 aaKnown RBP9.17□□□□□ -0.94
IFT20-207ENST00000578547 MIR17HGQ75NE6 70 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 TCF24Q7RTU0 167 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 TMEM61Q8N0U2 210 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 OR8I2Q8N0Y5 310 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 OR10G4Q8NGN3 311 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 OR10G9Q8NGN4 311 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 OR10G7Q8NGN6 311 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 GLMPQ8WWB7 406 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 GPR61Q9BZJ8 451 aa9.17□□□□□ -0.94
IFT20-207ENST00000578547 SEPSECSQ9HD40 501 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms